RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 ZCCHC11Q5TAX3 1644 aaKnown RBP14.51□□□□□ -0.09
GGA3-221ENST00000614198 KDM6BO15054 1643 aa14.49□□□□□ -0.09
GGA3-221ENST00000614198 CDC42BPAQ5VT25 1732 aa14.48□□□□□ -0.09
GGA3-221ENST00000614198 TTC37Q6PGP7 1564 aa14.48□□□□□ -0.09
GGA3-221ENST00000614198 SIN3AQ96ST3 1273 aa14.48□□□□□ -0.09
GGA3-221ENST00000614198 ABCC10Q5T3U5 1492 aa14.48□□□□□ -0.09
GGA3-221ENST00000614198 CAMSAP2Q08AD1 1489 aa14.47□□□□□ -0.09
GGA3-221ENST00000614198 ABCC5O15440 1437 aa14.46□□□□□ -0.09
GGA3-221ENST00000614198 FOXD1Q16676 465 aa14.46□□□□□ -0.09
GGA3-221ENST00000614198 PRKCSHP14314 528 aaPredicted RBP14.45□□□□□ -0.1
GGA3-221ENST00000614198 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.45□□□□□ -0.1
GGA3-221ENST00000614198 TCOF1Q13428 1488 aaKnown RBP14.45□□□□□ -0.1
GGA3-221ENST00000614198 NAIPQ13075 1403 aa14.45□□□□□ -0.1
GGA3-221ENST00000614198 DAPK1P53355 1430 aa14.44□□□□□ -0.1
GGA3-221ENST00000614198 MIA2Q96PC5 1412 aa14.44□□□□□ -0.1
GGA3-221ENST00000614198 KDM5BQ9UGL1 1544 aa14.43□□□□□ -0.1
GGA3-221ENST00000614198 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.43□□□□□ -0.1
GGA3-221ENST00000614198 CDC42BPBQ9Y5S2 1711 aa14.43□□□□□ -0.1
GGA3-221ENST00000614198 TRIM52Q96A61 297 aa14.43□□□□□ -0.1
GGA3-221ENST00000614198 HFM1A2PYH4 1435 aa14.4□□□□□ -0.1
GGA3-221ENST00000614198 MAPKBP1O60336 1514 aa14.39□□□□□ -0.11
GGA3-221ENST00000614198 ZNF316A6NFI3 1004 aaPredicted RBP14.39□□□□□ -0.11
GGA3-221ENST00000614198 UHRF1BP1LA0JNW5 1464 aa14.39□□□□□ -0.11
GGA3-221ENST00000614198 ASXL2Q76L83 1435 aa14.39□□□□□ -0.11
GGA3-221ENST00000614198 ARHGAP5Q13017 1502 aa14.39□□□□□ -0.11
GGA3-221ENST00000614198 ITSN2Q9NZM3 1697 aa14.38□□□□□ -0.11
GGA3-221ENST00000614198 SAMD9LQ8IVG5 1584 aa14.37□□□□□ -0.11
GGA3-221ENST00000614198 DNMT1P26358 1616 aaKnown RBP14.37□□□□□ -0.11
GGA3-221ENST00000614198 NPM1P06748 294 aaKnown RBP eCLIP14.37□□□□□ -0.11
GGA3-221ENST00000614198 RIMBP3CA6NJZ7 1639 aa14.36□□□□□ -0.11
GGA3-221ENST00000614198 RIMBP3BA6NNM3 1639 aa14.36□□□□□ -0.11
GGA3-221ENST00000614198 RIMBP3Q9UFD9 1639 aa14.36□□□□□ -0.11
GGA3-221ENST00000614198 AFAP1Q8N556 730 aa14.36□□□□□ -0.11
GGA3-221ENST00000614198 ARHGEF12Q9NZN5 1544 aa14.35□□□□□ -0.11
GGA3-221ENST00000614198 SYCP2Q9BX26 1530 aa14.35□□□□□ -0.11
GGA3-221ENST00000614198 WDR7Q9Y4E6 1490 aa14.34□□□□□ -0.11
GGA3-221ENST00000614198 PREX2Q70Z35 1606 aa14.34□□□□□ -0.11
GGA3-221ENST00000614198 ANP32EQ9BTT0 268 aa14.33□□□□□ -0.12
GGA3-221ENST00000614198 MBD5Q9P267 1494 aa14.33□□□□□ -0.12
GGA3-221ENST00000614198 NCOA1Q15788 1441 aa14.32□□□□□ -0.12
GGA3-221ENST00000614198 AKNAQ7Z591 1439 aa14.32□□□□□ -0.12
GGA3-221ENST00000614198 TSPY4P0CV99 314 aa14.31□□□□□ -0.12
GGA3-221ENST00000614198 TSPY10P0CW01 314 aa14.31□□□□□ -0.12
GGA3-221ENST00000614198 MYO5CQ9NQX4 1742 aa14.31□□□□□ -0.12
GGA3-221ENST00000614198 DENND4BO75064 1496 aaPredicted RBP14.31□□□□□ -0.12
GGA3-221ENST00000614198 C9orf84Q5VXU9 1444 aa14.3□□□□□ -0.12
GGA3-221ENST00000614198 TRAPPC8Q9Y2L5 1435 aa14.3□□□□□ -0.12
GGA3-221ENST00000614198 PLCH2O75038 1416 aa14.29□□□□□ -0.12
GGA3-221ENST00000614198 MIER1Q8N108 512 aa14.28□□□□□ -0.12
GGA3-221ENST00000614198 MPHOSPH9Q99550 1183 aa14.28□□□□□ -0.12
GGA3-221ENST00000614198 CLSPNQ9HAW4 1339 aa14.28□□□□□ -0.12
GGA3-221ENST00000614198 EFCAB2Q5VUJ9 269 aa14.28□□□□□ -0.12
GGA3-221ENST00000614198 MYT1LQ9UL68 1186 aa14.28□□□□□ -0.12
GGA3-221ENST00000614198 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.28□□□□□ -0.128e-7■■■■□ 22.1
GGA3-221ENST00000614198 GCC2Q8IWJ2 1684 aa14.28□□□□□ -0.12
GGA3-221ENST00000614198 CROCC2H7BZ55 1655 aa14.27□□□□□ -0.13
GGA3-221ENST00000614198 HIRIP3Q9BW71 556 aaPredicted RBP14.25□□□□□ -0.13
GGA3-221ENST00000614198 SLC4A1APQ9BWU0 796 aaKnown RBP14.25□□□□□ -0.13
GGA3-221ENST00000614198 KIF15Q9NS87 1388 aa14.25□□□□□ -0.13
GGA3-221ENST00000614198 ANKRD30AQ9BXX3 1397 aa14.24□□□□□ -0.13
GGA3-221ENST00000614198 FANCAO15360 1455 aa14.24□□□□□ -0.13
GGA3-221ENST00000614198 ROCK1Q13464 1354 aa14.24□□□□□ -0.13
GGA3-221ENST00000614198 CCDC141Q6ZP82 1450 aa14.23□□□□□ -0.13
GGA3-221ENST00000614198 ANKRD50Q9ULJ7 1429 aa14.23□□□□□ -0.13
GGA3-221ENST00000614198 RAPGEF3O95398 923 aa14.23□□□□□ -0.13
GGA3-221ENST00000614198 FAM69CQ0P6D2 419 aa14.21□□□□□ -0.13
GGA3-221ENST00000614198 ADGBQ8N7X0 1667 aa14.21□□□□□ -0.13
GGA3-221ENST00000614198 CD109Q6YHK3 1445 aa14.21□□□□□ -0.13
GGA3-221ENST00000614198 SCAPERQ9BY12 1400 aa14.2□□□□□ -0.14
GGA3-221ENST00000614198 ABCA9Q8IUA7 1624 aa14.2□□□□□ -0.14
GGA3-221ENST00000614198 NUP155O75694 1391 aa14.19□□□□□ -0.14
GGA3-221ENST00000614198 PKD2Q13563 968 aa14.19□□□□□ -0.14
GGA3-221ENST00000614198 ABCC1P33527 1531 aa14.19□□□□□ -0.14
GGA3-221ENST00000614198 TSHZ2Q9NRE2 1034 aa14.19□□□□□ -0.14
GGA3-221ENST00000614198 SUPT16HQ9Y5B9 1047 aaKnown RBP14.19□□□□□ -0.14
GGA3-221ENST00000614198 ADGRL2O95490 1459 aa14.18□□□□□ -0.14
GGA3-221ENST00000614198 PLEKHH2Q8IVE3 1493 aa14.18□□□□□ -0.14
GGA3-221ENST00000614198 SPAG9O60271 1321 aaKnown RBP14.18□□□□□ -0.14
GGA3-221ENST00000614198 ADGRL1O94910 1474 aa14.18□□□□□ -0.14
GGA3-221ENST00000614198 TSPOAP1O95153 1857 aa14.18□□□□□ -0.14
GGA3-221ENST00000614198 ARHGEF5Q12774 1597 aa14.18□□□□□ -0.14
GGA3-221ENST00000614198 PZPP20742 1482 aa14.17□□□□□ -0.14
GGA3-221ENST00000614198 KIAA1107Q9UPP5 1409 aa14.15□□□□□ -0.14
GGA3-221ENST00000614198 SHANK2Q9UPX8 1470 aa14.14□□□□□ -0.15
GGA3-221ENST00000614198 TONSLQ96HA7 1378 aa14.12□□□□□ -0.15
GGA3-221ENST00000614198 RSPH4AQ5TD94 716 aa14.12□□□□□ -0.15
GGA3-221ENST00000614198 L3MBTL2Q969R5 705 aa14.11□□□□□ -0.15
GGA3-221ENST00000614198 PPP1R15AO75807 674 aaPredicted RBP14.11□□□□□ -0.15
GGA3-221ENST00000614198 ANKRD30BQ9BXX2 1392 aa14.1□□□□□ -0.15
GGA3-221ENST00000614198 KIF3BO15066 747 aa14.1□□□□□ -0.15
GGA3-221ENST00000614198 ZNF326Q5BKZ1 582 aaKnown RBP14.09□□□□□ -0.15
GGA3-221ENST00000614198 ZFYVE16Q7Z3T8 1539 aa14.08□□□□□ -0.15
GGA3-221ENST00000614198 RGL3Q3MIN7 710 aa14.06□□□□□ -0.16
GGA3-221ENST00000614198 ATP7AQ04656 1500 aa14.06□□□□□ -0.16
GGA3-221ENST00000614198 GGT6Q6P531 493 aa14.05□□□□□ -0.16
GGA3-221ENST00000614198 KDM2AQ9Y2K7 1162 aa14.05□□□□□ -0.16
GGA3-221ENST00000614198 DIP2BQ9P265 1576 aa14.05□□□□□ -0.16
GGA3-221ENST00000614198 MAST1Q9Y2H9 1570 aa14.05□□□□□ -0.16
GGA3-221ENST00000614198 FAM135AQ9P2D6 1515 aa14.05□□□□□ -0.16
GGA3-221ENST00000614198 NBPF8Q3BBV2 869 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms