RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 ABCC5O15440 1437 aa19.99■□□□□ 0.79
PCDHGA3-202ENST00000612467 MAGI1Q96QZ7 1491 aaPredicted RBP19.98■□□□□ 0.79
PCDHGA3-202ENST00000612467 KIF14Q15058 1648 aa19.95■□□□□ 0.78
PCDHGA3-202ENST00000612467 CFDP1Q9UEE9 299 aaPredicted RBP19.95■□□□□ 0.78
PCDHGA3-202ENST00000612467 CDK11AQ9UQ88 783 aaPredicted RBP19.95■□□□□ 0.78
PCDHGA3-202ENST00000612467 L3MBTL2Q969R5 705 aa19.94■□□□□ 0.78
PCDHGA3-202ENST00000612467 TROQ12816 1431 aaPredicted RBP19.91■□□□□ 0.78
PCDHGA3-202ENST00000612467 HSPA5P11021 654 aaKnown RBP19.91■□□□□ 0.78
PCDHGA3-202ENST00000612467 SUPT16HQ9Y5B9 1047 aaKnown RBP19.9■□□□□ 0.78
PCDHGA3-202ENST00000612467 DNMT1P26358 1616 aaKnown RBP19.9■□□□□ 0.78
PCDHGA3-202ENST00000612467 AKNAQ7Z591 1439 aa19.9■□□□□ 0.78
PCDHGA3-202ENST00000612467 SLC4A1APQ9BWU0 796 aaKnown RBP19.89■□□□□ 0.78
PCDHGA3-202ENST00000612467 ANP32CO43423 234 aa19.89■□□□□ 0.77
PCDHGA3-202ENST00000612467 NUP160Q12769 1436 aa19.89■□□□□ 0.77
PCDHGA3-202ENST00000612467 CAMSAP2Q08AD1 1489 aa19.88■□□□□ 0.77
PCDHGA3-202ENST00000612467 GPATCH8Q9UKJ3 1502 aaKnown RBP19.88■□□□□ 0.77
PCDHGA3-202ENST00000612467 CARMIL2Q6F5E8 1435 aa19.86■□□□□ 0.77
PCDHGA3-202ENST00000612467 NBPF8Q3BBV2 869 aa19.85■□□□□ 0.77
PCDHGA3-202ENST00000612467 WASHC2AQ641Q2 1341 aa19.85■□□□□ 0.77
PCDHGA3-202ENST00000612467 ROCK1Q13464 1354 aa19.83■□□□□ 0.77
PCDHGA3-202ENST00000612467 C11orf95C9JLR9 678 aaPredicted RBP19.83■□□□□ 0.76
PCDHGA3-202ENST00000612467 ANKRD30BQ9BXX2 1392 aa19.83■□□□□ 0.76
PCDHGA3-202ENST00000612467 PLEKHD1A6NEE1 506 aa19.81■□□□□ 0.76
PCDHGA3-202ENST00000612467 BCANQ96GW7 911 aa19.81■□□□□ 0.76
PCDHGA3-202ENST00000612467 ATP10BO94823 1461 aa19.8■□□□□ 0.76
PCDHGA3-202ENST00000612467 NCOA1Q15788 1441 aa19.79■□□□□ 0.76
PCDHGA3-202ENST00000612467 EIF4G2P78344 907 aaKnown RBP eCLIP19.78■□□□□ 0.76
PCDHGA3-202ENST00000612467 ZNF326Q5BKZ1 582 aaKnown RBP19.77■□□□□ 0.76
PCDHGA3-202ENST00000612467 PZPP20742 1482 aa19.77■□□□□ 0.76
PCDHGA3-202ENST00000612467 HNRNPMP52272 730 aaKnown RBP eCLIP19.76■□□□□ 0.75
PCDHGA3-202ENST00000612467 ABCA8O94911 1581 aa19.75■□□□□ 0.75
PCDHGA3-202ENST00000612467 RPRD2Q5VT52 1461 aaKnown RBP19.75■□□□□ 0.75
PCDHGA3-202ENST00000612467 ITSN2Q9NZM3 1697 aa19.75■□□□□ 0.75
PCDHGA3-202ENST00000612467 CCER2I3L3R5 266 aa19.74■□□□□ 0.75
PCDHGA3-202ENST00000612467 TEX14Q8IWB6 1497 aa19.74■□□□□ 0.75
PCDHGA3-202ENST00000612467 PKD2Q13563 968 aa19.74■□□□□ 0.75
PCDHGA3-202ENST00000612467 CDC42BPAQ5VT25 1732 aa19.73■□□□□ 0.75
PCDHGA3-202ENST00000612467 CNGB1Q14028 1251 aaPredicted RBP19.73■□□□□ 0.75
PCDHGA3-202ENST00000612467 ADCY10Q96PN6 1610 aa19.73■□□□□ 0.75
PCDHGA3-202ENST00000612467 CCDC184Q52MB2 194 aa19.72■□□□□ 0.75
PCDHGA3-202ENST00000612467 PTPRGP23470 1445 aa19.71■□□□□ 0.75
PCDHGA3-202ENST00000612467 ABCC10Q5T3U5 1492 aa19.7■□□□□ 0.74
PCDHGA3-202ENST00000612467 FKBP8Q14318 412 aa19.69■□□□□ 0.74
PCDHGA3-202ENST00000612467 ADGBQ8N7X0 1667 aa19.68■□□□□ 0.74
PCDHGA3-202ENST00000612467 ANKRD30AQ9BXX3 1397 aa19.68■□□□□ 0.74
PCDHGA3-202ENST00000612467 CROCC2H7BZ55 1655 aa19.68■□□□□ 0.74
PCDHGA3-202ENST00000612467 ANKRD50Q9ULJ7 1429 aa19.68■□□□□ 0.74
PCDHGA3-202ENST00000612467 CHD1O14646 1710 aa19.66■□□□□ 0.74
PCDHGA3-202ENST00000612467 POLR3GLQ9BT43 218 aa19.66■□□□□ 0.74
PCDHGA3-202ENST00000612467 C9orf84Q5VXU9 1444 aa19.66■□□□□ 0.74
PCDHGA3-202ENST00000612467 ERCC6L2Q5T890 1561 aa19.65■□□□□ 0.74
PCDHGA3-202ENST00000612467 NUP155O75694 1391 aa19.65■□□□□ 0.74
PCDHGA3-202ENST00000612467 ADGRL2O95490 1459 aa19.64■□□□□ 0.73
PCDHGA3-202ENST00000612467 CCDC7Q96M83 1385 aa19.64■□□□□ 0.73
PCDHGA3-202ENST00000612467 MYT1Q01538 1121 aa19.63■□□□□ 0.73
PCDHGA3-202ENST00000612467 KIAA1107Q9UPP5 1409 aa19.63■□□□□ 0.73
PCDHGA3-202ENST00000612467 HNRNPUQ00839 825 aaKnown RBP eCLIP19.63■□□□□ 0.73
PCDHGA3-202ENST00000612467 TSPY4P0CV99 314 aa19.62■□□□□ 0.73
PCDHGA3-202ENST00000612467 TSPY10P0CW01 314 aa19.62■□□□□ 0.73
PCDHGA3-202ENST00000612467 KIF7Q2M1P5 1343 aa19.61■□□□□ 0.73
PCDHGA3-202ENST00000612467 CNTLNQ9NXG0 1405 aa19.6■□□□□ 0.73
PCDHGA3-202ENST00000612467 KDM2AQ9Y2K7 1162 aa19.6■□□□□ 0.73
PCDHGA3-202ENST00000612467 KIF15Q9NS87 1388 aa19.58■□□□□ 0.73
PCDHGA3-202ENST00000612467 SPATA31E1Q6ZUB1 1445 aa19.57■□□□□ 0.72
PCDHGA3-202ENST00000612467 SAMD9LQ8IVG5 1584 aa19.56■□□□□ 0.72
PCDHGA3-202ENST00000612467 MBD5Q9P267 1494 aa19.56■□□□□ 0.72
PCDHGA3-202ENST00000612467 CDC42BPBQ9Y5S2 1711 aa19.55■□□□□ 0.72
PCDHGA3-202ENST00000612467 FAM9BQ8IZU0 186 aa19.55■□□□□ 0.72
PCDHGA3-202ENST00000612467 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.54■□□□□ 0.72
PCDHGA3-202ENST00000612467 PRKRIP1Q9H875 184 aaPredicted RBP19.54■□□□□ 0.72
PCDHGA3-202ENST00000612467 SENP3-EIF4A1A0A087X0R7 540 aa19.54■□□□□ 0.72
PCDHGA3-202ENST00000612467 IRX6P78412 446 aaPredicted RBP19.54■□□□□ 0.72
PCDHGA3-202ENST00000612467 TTC37Q6PGP7 1564 aa19.53■□□□□ 0.72
PCDHGA3-202ENST00000612467 USP47Q96K76 1375 aa19.52■□□□□ 0.71
PCDHGA3-202ENST00000612467 SYCP2Q9BX26 1530 aa19.5■□□□□ 0.71
PCDHGA3-202ENST00000612467 SHANK2Q9UPX8 1470 aa19.5■□□□□ 0.71
PCDHGA3-202ENST00000612467 BCORL1Q5H9F3 1711 aa19.5■□□□□ 0.71
PCDHGA3-202ENST00000612467 DCAF11Q8TEB1 546 aa19.5■□□□□ 0.71
PCDHGA3-202ENST00000612467 MRS2Q9HD23 443 aa19.5■□□□□ 0.71
PCDHGA3-202ENST00000612467 TSHZ2Q9NRE2 1034 aa19.48■□□□□ 0.71
PCDHGA3-202ENST00000612467 ARHGAP5Q13017 1502 aa19.48■□□□□ 0.71
PCDHGA3-202ENST00000612467 PREX2Q70Z35 1606 aa19.48■□□□□ 0.71
PCDHGA3-202ENST00000612467 CCDC141Q6ZP82 1450 aa19.47■□□□□ 0.71
PCDHGA3-202ENST00000612467 RGL3Q3MIN7 710 aa19.47■□□□□ 0.71
PCDHGA3-202ENST00000612467 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.47■□□□□ 0.71
PCDHGA3-202ENST00000612467 NEFLP07196 543 aa19.46■□□□□ 0.71
PCDHGA3-202ENST00000612467 CARD11Q9BXL7 1154 aa19.45■□□□□ 0.7
PCDHGA3-202ENST00000612467 SHROOM2Q13796 1616 aa19.44■□□□□ 0.7
PCDHGA3-202ENST00000612467 ARHGEF5Q12774 1597 aa19.44■□□□□ 0.7
PCDHGA3-202ENST00000612467 ST20-MTHFSA0A0A6YYL1 179 aa19.41■□□□□ 0.7
PCDHGA3-202ENST00000612467 FAM135AQ9P2D6 1515 aa19.41■□□□□ 0.7
PCDHGA3-202ENST00000612467 KDM5CP41229 1560 aa19.41■□□□□ 0.7
PCDHGA3-202ENST00000612467 ARHGEF12Q9NZN5 1544 aa19.41■□□□□ 0.7
PCDHGA3-202ENST00000612467 ABCC2Q92887 1545 aa19.4■□□□□ 0.7
PCDHGA3-202ENST00000612467 PLEKHH2Q8IVE3 1493 aa19.39■□□□□ 0.7
PCDHGA3-202ENST00000612467 DHX29Q7Z478 1369 aaKnown RBP19.39■□□□□ 0.69
PCDHGA3-202ENST00000612467 KDM5DQ9BY66 1539 aa19.38■□□□□ 0.69
PCDHGA3-202ENST00000612467 POLR1AO95602 1720 aaPredicted RBP19.38■□□□□ 0.69
PCDHGA3-202ENST00000612467 NBPF1Q3BBV0 1214 aa19.37■□□□□ 0.69
PCDHGA3-202ENST00000612467 RALGAPBQ86X10 1494 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms