RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 ZNF330Q9Y3S2 320 aaPredicted RBP12.25□□□□□ -0.45
SRGAP2B-204ENST00000612199 POGKQ9P215 609 aa12.24□□□□□ -0.45
SRGAP2B-204ENST00000612199 DNTTIP2Q5QJE6 756 aaKnown RBP12.24□□□□□ -0.45
SRGAP2B-204ENST00000612199 SAFB2Q14151 953 aaKnown RBP eCLIP12.23□□□□□ -0.45
SRGAP2B-204ENST00000612199 CFAP53Q96M91 514 aa12.23□□□□□ -0.45
SRGAP2B-204ENST00000612199 LAS1LQ9Y4W2 734 aaKnown RBP12.23□□□□□ -0.45
SRGAP2B-204ENST00000612199 FGD1P98174 961 aa12.22□□□□□ -0.45
SRGAP2B-204ENST00000612199 PKD2Q13563 968 aa12.21□□□□□ -0.45
SRGAP2B-204ENST00000612199 GGT6Q6P531 493 aa12.21□□□□□ -0.45
SRGAP2B-204ENST00000612199 SMARCA2P51531 1590 aa12.21□□□□□ -0.45
SRGAP2B-204ENST00000612199 SETD5Q9C0A6 1442 aa12.21□□□□□ -0.46
SRGAP2B-204ENST00000612199 A0A0U1RQG5 324 aaPredicted RBP12.2□□□□□ -0.46
SRGAP2B-204ENST00000612199 DDRGK1Q96HY6 314 aa12.2□□□□□ -0.46
SRGAP2B-204ENST00000612199 ARHGAP35Q9NRY4 1499 aa12.2□□□□□ -0.46
SRGAP2B-204ENST00000612199 HSPA5P11021 654 aaKnown RBP12.18□□□□□ -0.46
SRGAP2B-204ENST00000612199 SOX12O15370 315 aa12.18□□□□□ -0.46
SRGAP2B-204ENST00000612199 PTMAP06454 111 aaKnown RBP12.18□□□□□ -0.46
SRGAP2B-204ENST00000612199 FRAT1Q92837 279 aaPredicted RBP12.18□□□□□ -0.46
SRGAP2B-204ENST00000612199 U2SURPO15042 1029 aaKnown RBP12.18□□□□□ -0.46
SRGAP2B-204ENST00000612199 PNNQ9H307 717 aaKnown RBP12.18□□□□□ -0.46
SRGAP2B-204ENST00000612199 PDS5BQ9NTI5 1447 aa12.18□□□□□ -0.46
SRGAP2B-204ENST00000612199 RAB3GAP2Q9H2M9 1393 aa12.18□□□□□ -0.46
SRGAP2B-204ENST00000612199 BECN1Q14457 450 aa12.18□□□□□ -0.46
SRGAP2B-204ENST00000612199 PPP4R2Q9NY27 417 aa12.16□□□□□ -0.46
SRGAP2B-204ENST00000612199 TOP2AP11388 1531 aaKnown RBP12.16□□□□□ -0.46
SRGAP2B-204ENST00000612199 RUSC2Q8N2Y8 1516 aa12.16□□□□□ -0.46
SRGAP2B-204ENST00000612199 KIAA2012Q0VF49 1180 aa12.16□□□□□ -0.46
SRGAP2B-204ENST00000612199 FHOD3Q2V2M9 1422 aa12.16□□□□□ -0.46
SRGAP2B-204ENST00000612199 FTSJ3Q8IY81 847 aaKnown RBP12.15□□□□□ -0.46
SRGAP2B-204ENST00000612199 MAPK8IP3Q9UPT6 1336 aa12.15□□□□□ -0.46
SRGAP2B-204ENST00000612199 TMF1P82094 1093 aa12.15□□□□□ -0.46
SRGAP2B-204ENST00000612199 OS9Q13438 667 aaPredicted RBP12.15□□□□□ -0.46
SRGAP2B-204ENST00000612199 RAPGEF2Q9Y4G8 1499 aa12.15□□□□□ -0.46
SRGAP2B-204ENST00000612199 B4GALNT3Q6L9W6 998 aa12.15□□□□□ -0.46
SRGAP2B-204ENST00000612199 CCER2I3L3R5 266 aa12.15□□□□□ -0.46
SRGAP2B-204ENST00000612199 APPP05067 770 aa12.15□□□□□ -0.46
SRGAP2B-204ENST00000612199 STK26Q9P289 416 aa12.15□□□□□ -0.46
SRGAP2B-204ENST00000612199 MPHOSPH9Q99550 1183 aa12.15□□□□□ -0.47
SRGAP2B-204ENST00000612199 ANP32EQ9BTT0 268 aa12.15□□□□□ -0.47
SRGAP2B-204ENST00000612199 RGS3P49796 1198 aa12.14□□□□□ -0.47
SRGAP2B-204ENST00000612199 MEX3CQ5U5Q3 659 aaKnown RBP12.14□□□□□ -0.47
SRGAP2B-204ENST00000612199 CADPSQ9ULU8 1353 aa12.13□□□□□ -0.47
SRGAP2B-204ENST00000612199 PPP1R1BQ9UD71 204 aaPredicted RBP12.13□□□□□ -0.47
SRGAP2B-204ENST00000612199 SRPK2P78362 688 aaKnown RBP12.13□□□□□ -0.47
SRGAP2B-204ENST00000612199 HNRNPMP52272 730 aaKnown RBP eCLIP12.12□□□□□ -0.47
SRGAP2B-204ENST00000612199 NUDCQ9Y266 331 aa12.12□□□□□ -0.47
SRGAP2B-204ENST00000612199 NUP155O75694 1391 aa12.12□□□□□ -0.47
SRGAP2B-204ENST00000612199 PATL2C9JE40 543 aaKnown RBP12.12□□□□□ -0.47
SRGAP2B-204ENST00000612199 CARMIL2Q6F5E8 1435 aa12.11□□□□□ -0.47
SRGAP2B-204ENST00000612199 CALRP27797 417 aaKnown RBP12.11□□□□□ -0.47
SRGAP2B-204ENST00000612199 KANK1Q14678 1352 aa12.11□□□□□ -0.47
SRGAP2B-204ENST00000612199 PAF1Q8N7H5 531 aa12.11□□□□□ -0.47
SRGAP2B-204ENST00000612199 RAD21O60216 631 aa12.11□□□□□ -0.47
SRGAP2B-204ENST00000612199 ATAD2BQ9ULI0 1458 aa12.11□□□□□ -0.47
SRGAP2B-204ENST00000612199 FMN1Q68DA7 1419 aa12.1□□□□□ -0.47
SRGAP2B-204ENST00000612199 SAMD1Q6SPF0 538 aaPredicted RBP12.1□□□□□ -0.47
SRGAP2B-204ENST00000612199 CREBRFQ8IUR6 639 aa12.09□□□□□ -0.47
SRGAP2B-204ENST00000612199 KCNJ4P48050 445 aa12.09□□□□□ -0.47
SRGAP2B-204ENST00000612199 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.08□□□□□ -0.48
SRGAP2B-204ENST00000612199 GOLGA6L22H0YM25 854 aa12.08□□□□□ -0.48
SRGAP2B-204ENST00000612199 GNL2Q13823 731 aaKnown RBP12.08□□□□□ -0.48
SRGAP2B-204ENST00000612199 NUTM2DQ5VT03 806 aaPredicted RBP12.07□□□□□ -0.48
SRGAP2B-204ENST00000612199 L3MBTL2Q969R5 705 aa12.07□□□□□ -0.48
SRGAP2B-204ENST00000612199 MAP3K9P80192 1104 aa12.07□□□□□ -0.48
SRGAP2B-204ENST00000612199 MORC1Q86VD1 984 aa12.07□□□□□ -0.48
SRGAP2B-204ENST00000612199 PLCD3Q8N3E9 789 aa12.07□□□□□ -0.48
SRGAP2B-204ENST00000612199 EFCAB2Q5VUJ9 269 aa12.07□□□□□ -0.48
SRGAP2B-204ENST00000612199 KIF3BO15066 747 aa12.06□□□□□ -0.48
SRGAP2B-204ENST00000612199 CHMP4BQ9H444 224 aaKnown RBP12.06□□□□□ -0.48
SRGAP2B-204ENST00000612199 MS4A1P11836 297 aa12.06□□□□□ -0.48
SRGAP2B-204ENST00000612199 JPH4Q96JJ6 628 aa12.06□□□□□ -0.48
SRGAP2B-204ENST00000612199 CTDP1Q9Y5B0 961 aaPredicted RBP12.05□□□□□ -0.48
SRGAP2B-204ENST00000612199 SMARCA4P51532 1647 aa12.05□□□□□ -0.48
SRGAP2B-204ENST00000612199 ROCK2O75116 1388 aaKnown RBP12.04□□□□□ -0.48
SRGAP2B-204ENST00000612199 CEP89Q96ST8 783 aa12.04□□□□□ -0.48
SRGAP2B-204ENST00000612199 ARID3AQ99856 593 aa12.04□□□□□ -0.48
SRGAP2B-204ENST00000612199 IBSPP21815 317 aaPredicted RBP12.03□□□□□ -0.48
SRGAP2B-204ENST00000612199 TCEAL9Q9UHQ7 104 aa12.03□□□□□ -0.48
SRGAP2B-204ENST00000612199 ANKRD30AQ9BXX3 1397 aa12.03□□□□□ -0.48
SRGAP2B-204ENST00000612199 FBXW7Q969H0 707 aa12.02□□□□□ -0.48
SRGAP2B-204ENST00000612199 CCDC97Q96F63 343 aaPredicted RBP12.02□□□□□ -0.48
SRGAP2B-204ENST00000612199 RRP12Q5JTH9 1297 aaKnown RBP12.02□□□□□ -0.49
SRGAP2B-204ENST00000612199 TAF7LQ5H9L4 462 aa12.01□□□□□ -0.49
SRGAP2B-204ENST00000612199 CASC1Q6TDU7 716 aa12.01□□□□□ -0.49
SRGAP2B-204ENST00000612199 SPRYD3Q8NCJ5 442 aa12.01□□□□□ -0.49
SRGAP2B-204ENST00000612199 CHAF1AQ13111 956 aaPredicted RBP12□□□□□ -0.49
SRGAP2B-204ENST00000612199 GOLGA6L6A8MZA4 724 aa11.99□□□□□ -0.49
SRGAP2B-204ENST00000612199 FANCD2Q9BXW9 1451 aa11.99□□□□□ -0.49
SRGAP2B-204ENST00000612199 KTN1Q86UP2 1357 aaKnown RBP11.99□□□□□ -0.49
SRGAP2B-204ENST00000612199 MARCH6O60337 910 aa11.98□□□□□ -0.49
SRGAP2B-204ENST00000612199 U2AF1L5P0DN76 240 aaPredicted RBP11.98□□□□□ -0.49
SRGAP2B-204ENST00000612199 U2AF1Q01081 240 aaKnown RBP eCLIP11.98□□□□□ -0.49
SRGAP2B-204ENST00000612199 SPAG9O60271 1321 aaKnown RBP11.97□□□□□ -0.49
SRGAP2B-204ENST00000612199 NOP58Q9Y2X3 529 aaKnown RBP11.97□□□□□ -0.49
SRGAP2B-204ENST00000612199 PAK3O75914 559 aaPredicted RBP11.97□□□□□ -0.49
SRGAP2B-204ENST00000612199 SPDYE4A6NLX3 237 aa11.97□□□□□ -0.49
SRGAP2B-204ENST00000612199 HDGFP51858 240 aaKnown RBP11.97□□□□□ -0.49
SRGAP2B-204ENST00000612199 FRAT2O75474 233 aaPredicted RBP11.96□□□□□ -0.5
SRGAP2B-204ENST00000612199 NUTM2FA1L443 756 aa11.96□□□□□ -0.5
SRGAP2B-204ENST00000612199 CSB-PGBD3P0DP91 1061 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms