RNA–Protein interactions for RNA: ENST00000611174.4

CENPE-208, Transcript of centromere protein E, humanhuman

TSL 5 BASIC

Gene CENPE, Length 8,260 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPE-208ENST00000611174 U2AF1L5P0DN76 240 aaPredicted RBP6.15□□□□□ -1.42
CENPE-208ENST00000611174 U2AF1Q01081 240 aaKnown RBP eCLIP6.15□□□□□ -1.423e-8■■■■□ 22.3
CENPE-208ENST00000611174 MYH16Q9H6N6 1097 aa6.15□□□□□ -1.42
CENPE-208ENST00000611174 ARHGAP35Q9NRY4 1499 aa6.15□□□□□ -1.43
CENPE-208ENST00000611174 IGF1RP08069 1367 aa6.14□□□□□ -1.43
CENPE-208ENST00000611174 PRKRIP1Q9H875 184 aaPredicted RBP6.14□□□□□ -1.43
CENPE-208ENST00000611174 ANP32BQ92688 251 aaKnown RBP6.14□□□□□ -1.43
CENPE-208ENST00000611174 RCAN3Q9UKA8 241 aa6.14□□□□□ -1.43
CENPE-208ENST00000611174 APBB1O00213 710 aa6.14□□□□□ -1.43
CENPE-208ENST00000611174 TRAK1Q9UPV9 953 aa6.14□□□□□ -1.43
CENPE-208ENST00000611174 CCDC146Q8IYE0 955 aa6.13□□□□□ -1.43
CENPE-208ENST00000611174 SPRYD3Q8NCJ5 442 aa6.13□□□□□ -1.43
CENPE-208ENST00000611174 FMN1Q68DA7 1419 aa6.13□□□□□ -1.43
CENPE-208ENST00000611174 PLIN1O60240 522 aa6.13□□□□□ -1.43
CENPE-208ENST00000611174 NOP58Q9Y2X3 529 aaKnown RBP6.12□□□□□ -1.43
CENPE-208ENST00000611174 NCLP19338 710 aaKnown RBP6.12□□□□□ -1.43
CENPE-208ENST00000611174 TRHP20396 242 aaPredicted RBP6.12□□□□□ -1.43
CENPE-208ENST00000611174 BCL2L13Q9BXK5 485 aa6.12□□□□□ -1.43
CENPE-208ENST00000611174 RRP7AQ9Y3A4 280 aaKnown RBP6.12□□□□□ -1.43
CENPE-208ENST00000611174 NLRP13Q86W25 1043 aa6.12□□□□□ -1.43
CENPE-208ENST00000611174 PDS5BQ9NTI5 1447 aa6.11□□□□□ -1.43
CENPE-208ENST00000611174 DNAJC5BQ9UF47 199 aa6.11□□□□□ -1.43
CENPE-208ENST00000611174 TAOK2Q9UL54 1235 aa6.11□□□□□ -1.43
CENPE-208ENST00000611174 ELL2O00472 640 aaPredicted RBP6.11□□□□□ -1.43
CENPE-208ENST00000611174 ROCK2O75116 1388 aaKnown RBP6.11□□□□□ -1.43
CENPE-208ENST00000611174 BECN1Q14457 450 aa6.11□□□□□ -1.43
CENPE-208ENST00000611174 PANK3Q9H999 370 aa6.1□□□□□ -1.43
CENPE-208ENST00000611174 ANKRD30AQ9BXX3 1397 aa6.1□□□□□ -1.43
CENPE-208ENST00000611174 SLKQ9H2G2 1235 aaPredicted RBP6.1□□□□□ -1.43
CENPE-208ENST00000611174 HAP1P54257 671 aaPredicted RBP6.1□□□□□ -1.43
CENPE-208ENST00000611174 SPAG9O60271 1321 aaKnown RBP6.1□□□□□ -1.43
CENPE-208ENST00000611174 PHLDB1Q86UU1 1377 aa6.1□□□□□ -1.43
CENPE-208ENST00000611174 KTN1Q86UP2 1357 aaKnown RBP6.09□□□□□ -1.43
CENPE-208ENST00000611174 CARMIL2Q6F5E8 1435 aa6.09□□□□□ -1.43
CENPE-208ENST00000611174 DDRGK1Q96HY6 314 aa6.09□□□□□ -1.43
CENPE-208ENST00000611174 APAF1O14727 1248 aa6.08□□□□□ -1.44
CENPE-208ENST00000611174 SLC4A3P48751 1232 aa6.08□□□□□ -1.44
CENPE-208ENST00000611174 CYB5RLQ6IPT4 315 aa6.08□□□□□ -1.44
CENPE-208ENST00000611174 GOLGA2Q08379 1002 aa6.08□□□□□ -1.44
CENPE-208ENST00000611174 EXOC6Q8TAG9 804 aa6.08□□□□□ -1.44
CENPE-208ENST00000611174 WASHC2CQ9Y4E1 1318 aa6.08□□□□□ -1.44
CENPE-208ENST00000611174 TOP2AP11388 1531 aaKnown RBP6.08□□□□□ -1.44
CENPE-208ENST00000611174 RALBP1Q15311 655 aa6.08□□□□□ -1.44
CENPE-208ENST00000611174 RAD54L2Q9Y4B4 1467 aa6.07□□□□□ -1.44
CENPE-208ENST00000611174 TCERG1O14776 1098 aaKnown RBP6.07□□□□□ -1.44
CENPE-208ENST00000611174 AFAP1Q8N556 730 aa6.07□□□□□ -1.44
CENPE-208ENST00000611174 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.07□□□□□ -1.443e-6■■□□□ 12.4
CENPE-208ENST00000611174 SMARCA2P51531 1590 aa6.07□□□□□ -1.44
CENPE-208ENST00000611174 PAK3O75914 559 aaPredicted RBP6.06□□□□□ -1.44
CENPE-208ENST00000611174 DEKP35659 375 aaKnown RBP6.06□□□□□ -1.44
CENPE-208ENST00000611174 CCDC184Q52MB2 194 aa6.06□□□□□ -1.44
CENPE-208ENST00000611174 PLCB2Q00722 1185 aa6.06□□□□□ -1.44
CENPE-208ENST00000611174 KANK1Q14678 1352 aa6.06□□□□□ -1.44
CENPE-208ENST00000611174 LTV1Q96GA3 475 aaPredicted RBP6.05□□□□□ -1.44
CENPE-208ENST00000611174 GZF1Q9H116 711 aaPredicted RBP6.05□□□□□ -1.44
CENPE-208ENST00000611174 ITPRIPQ8IWB1 547 aa6.05□□□□□ -1.44
CENPE-208ENST00000611174 TRIM44Q96DX7 344 aaPredicted RBP6.05□□□□□ -1.44
CENPE-208ENST00000611174 KIF7Q2M1P5 1343 aa6.05□□□□□ -1.44
CENPE-208ENST00000611174 NBPF8Q3BBV2 869 aa6.05□□□□□ -1.44
CENPE-208ENST00000611174 WASHC2AQ641Q2 1341 aa6.05□□□□□ -1.44
CENPE-208ENST00000611174 SMC4Q9NTJ3 1288 aa6.05□□□□□ -1.44
CENPE-208ENST00000611174 COG6Q9Y2V7 657 aa6.05□□□□□ -1.44
CENPE-208ENST00000611174 GOLGA6L22H0YM25 854 aa6.04□□□□□ -1.44
CENPE-208ENST00000611174 NBPF1Q3BBV0 1214 aa6.04□□□□□ -1.44
CENPE-208ENST00000611174 OS9Q13438 667 aaPredicted RBP6.04□□□□□ -1.44
CENPE-208ENST00000611174 HDGFL2Q7Z4V5 671 aaPredicted RBP6.04□□□□□ -1.44
CENPE-208ENST00000611174 FANCD2Q9BXW9 1451 aa6.04□□□□□ -1.44
CENPE-208ENST00000611174 PTPRGP23470 1445 aa6.04□□□□□ -1.44
CENPE-208ENST00000611174 TMEM132EQ6IEE7 984 aa6.04□□□□□ -1.44
CENPE-208ENST00000611174 CDCA7LQ96GN5 454 aa6.04□□□□□ -1.44
CENPE-208ENST00000611174 USP47Q96K76 1375 aa6.04□□□□□ -1.44
CENPE-208ENST00000611174 RSPH4AQ5TD94 716 aa6.04□□□□□ -1.44
CENPE-208ENST00000611174 MINK1Q8N4C8 1332 aaPredicted RBP6.03□□□□□ -1.44
CENPE-208ENST00000611174 ARAP1Q96P48 1450 aa6.03□□□□□ -1.44
CENPE-208ENST00000611174 HSP90AB1P08238 724 aaKnown RBP6.03□□□□□ -1.44
CENPE-208ENST00000611174 KCNJ4P48050 445 aa6.03□□□□□ -1.44
CENPE-208ENST00000611174 ZNF330Q9Y3S2 320 aaPredicted RBP6.03□□□□□ -1.44
CENPE-208ENST00000611174 AQRO60306 1485 aaKnown RBP eCLIP6.03□□□□□ -1.443e-7■■■■□ 25.2
CENPE-208ENST00000611174 SLC4A10Q6U841 1118 aa6.03□□□□□ -1.44
CENPE-208ENST00000611174 ERICH6BQ5W0A0 696 aa6.02□□□□□ -1.45
CENPE-208ENST00000611174 MS4A1P11836 297 aa6.02□□□□□ -1.45
CENPE-208ENST00000611174 RTF1Q92541 710 aaKnown RBP6.02□□□□□ -1.45
CENPE-208ENST00000611174 MFAP1P55081 439 aaKnown RBP6.02□□□□□ -1.45
CENPE-208ENST00000611174 CFAP70Q5T0N1 1121 aa6.02□□□□□ -1.45
CENPE-208ENST00000611174 CRBNQ96SW2 442 aa6.02□□□□□ -1.45
CENPE-208ENST00000611174 FGD5Q6ZNL6 1462 aa6.02□□□□□ -1.45
CENPE-208ENST00000611174 FGD1P98174 961 aa6.02□□□□□ -1.45
CENPE-208ENST00000611174 FOXD4L1Q9NU39 408 aa6.02□□□□□ -1.45
CENPE-208ENST00000611174 CCDC144AA2RUR9 1427 aa6.01□□□□□ -1.45
CENPE-208ENST00000611174 NAP1L2Q9ULW6 460 aaPredicted RBP6.01□□□□□ -1.45
CENPE-208ENST00000611174 MYBBP1AQ9BQG0 1328 aaKnown RBP6.01□□□□□ -1.45
CENPE-208ENST00000611174 CCDC18Q5T9S5 1454 aa6.01□□□□□ -1.45
CENPE-208ENST00000611174 PDE4AP27815 886 aa6.01□□□□□ -1.45
CENPE-208ENST00000611174 NGDNQ8NEJ9 315 aaKnown RBP6.01□□□□□ -1.45
CENPE-208ENST00000611174 CENPJQ9HC77 1338 aaPredicted RBP6.01□□□□□ -1.45
CENPE-208ENST00000611174 PDE3BQ13370 1112 aa6.01□□□□□ -1.45
CENPE-208ENST00000611174 PTMAP06454 111 aaKnown RBP6.01□□□□□ -1.45
CENPE-208ENST00000611174 TERF2IPQ9NYB0 399 aa6.01□□□□□ -1.45
CENPE-208ENST00000611174 IPO8O15397 1037 aaKnown RBP6.01□□□□□ -1.45
CENPE-208ENST00000611174 IPO9Q96P70 1041 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms