RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 FRAT1Q92837 279 aaPredicted RBP12.65□□□□□ -0.38
TPM1-233ENST00000610733 CDCA7LQ96GN5 454 aa12.65□□□□□ -0.38
TPM1-233ENST00000610733 PLEKHD1A6NEE1 506 aa12.64□□□□□ -0.39
TPM1-233ENST00000610733 IPO9Q96P70 1041 aaKnown RBP12.64□□□□□ -0.39
TPM1-233ENST00000610733 HNRNPMP52272 730 aaKnown RBP eCLIP12.64□□□□□ -0.39
TPM1-233ENST00000610733 CCDC146Q8IYE0 955 aa12.63□□□□□ -0.39
TPM1-233ENST00000610733 FANCIQ9NVI1 1328 aa12.63□□□□□ -0.39
TPM1-233ENST00000610733 MAPKBP1O60336 1514 aa12.63□□□□□ -0.39
TPM1-233ENST00000610733 CCDC7Q96M83 1385 aa12.62□□□□□ -0.39
TPM1-233ENST00000610733 CFTRP13569 1480 aa12.62□□□□□ -0.39
TPM1-233ENST00000610733 ZBED9Q6R2W3 1325 aa12.62□□□□□ -0.39
TPM1-233ENST00000610733 NUP155O75694 1391 aa12.62□□□□□ -0.39
TPM1-233ENST00000610733 IL27Q8NEV9 243 aa12.61□□□□□ -0.39
TPM1-233ENST00000610733 TOP2BQ02880 1626 aa12.6□□□□□ -0.39
TPM1-233ENST00000610733 KNSTRNQ9Y448 316 aa12.59□□□□□ -0.39
TPM1-233ENST00000610733 UACAQ9BZF9 1416 aa12.58□□□□□ -0.4
TPM1-233ENST00000610733 NESP48681 1621 aa12.58□□□□□ -0.4
TPM1-233ENST00000610733 SLKQ9H2G2 1235 aaPredicted RBP12.58□□□□□ -0.4
TPM1-233ENST00000610733 PDE4AP27815 886 aa12.58□□□□□ -0.4
TPM1-233ENST00000610733 USP47Q96K76 1375 aa12.58□□□□□ -0.4
TPM1-233ENST00000610733 FANCD2Q9BXW9 1451 aa12.57□□□□□ -0.4
TPM1-233ENST00000610733 TIAM1Q13009 1591 aa12.57□□□□□ -0.4
TPM1-233ENST00000610733 PDS5BQ9NTI5 1447 aa12.56□□□□□ -0.4
TPM1-233ENST00000610733 CRBNQ96SW2 442 aa12.56□□□□□ -0.4
TPM1-233ENST00000610733 BICRAQ9NZM4 1560 aa12.56□□□□□ -0.4
TPM1-233ENST00000610733 PTPRKQ15262 1439 aa12.56□□□□□ -0.4
TPM1-233ENST00000610733 ERICH3Q5RHP9 1530 aa12.56□□□□□ -0.4
TPM1-233ENST00000610733 NCOA2Q15596 1464 aa12.55□□□□□ -0.4
TPM1-233ENST00000610733 ROCK2O75116 1388 aaKnown RBP12.55□□□□□ -0.4
TPM1-233ENST00000610733 SAFB2Q14151 953 aaKnown RBP eCLIP12.55□□□□□ -0.4
TPM1-233ENST00000610733 AQRO60306 1485 aaKnown RBP eCLIP12.55□□□□□ -0.42e-12■■■■□ 26.1
TPM1-233ENST00000610733 CNTLNQ9NXG0 1405 aa12.54□□□□□ -0.4
TPM1-233ENST00000610733 CLUAP1Q96AJ1 413 aa12.54□□□□□ -0.4
TPM1-233ENST00000610733 BCL2L13Q9BXK5 485 aa12.54□□□□□ -0.4
TPM1-233ENST00000610733 RRP1P56182 461 aaKnown RBP12.54□□□□□ -0.4
TPM1-233ENST00000610733 ARID4BQ4LE39 1312 aaPredicted RBP12.53□□□□□ -0.4
TPM1-233ENST00000610733 PANK3Q9H999 370 aa12.53□□□□□ -0.4
TPM1-233ENST00000610733 MYOM3Q5VTT5 1437 aa12.53□□□□□ -0.4
TPM1-233ENST00000610733 RRP7AQ9Y3A4 280 aaKnown RBP12.53□□□□□ -0.4
TPM1-233ENST00000610733 GZF1Q9H116 711 aaPredicted RBP12.52□□□□□ -0.4
TPM1-233ENST00000610733 NBPF1Q3BBV0 1214 aa12.52□□□□□ -0.41
TPM1-233ENST00000610733 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.52□□□□□ -0.41
TPM1-233ENST00000610733 NAIPQ13075 1403 aa12.52□□□□□ -0.41
TPM1-233ENST00000610733 PPM1GO15355 546 aaPredicted RBP12.51□□□□□ -0.41
TPM1-233ENST00000610733 ERICH6BQ5W0A0 696 aa12.51□□□□□ -0.41
TPM1-233ENST00000610733 NUTM2DQ5VT03 806 aaPredicted RBP12.5□□□□□ -0.41
TPM1-233ENST00000610733 PCF11O94913 1555 aaKnown RBP12.49□□□□□ -0.41
TPM1-233ENST00000610733 HSP90AA1P07900 732 aaKnown RBP12.49□□□□□ -0.41
TPM1-233ENST00000610733 PLPPR3Q6T4P5 718 aa12.49□□□□□ -0.41
TPM1-233ENST00000610733 KTN1Q86UP2 1357 aaKnown RBP12.49□□□□□ -0.41
TPM1-233ENST00000610733 TPRNQ4KMQ1 711 aa12.48□□□□□ -0.41
TPM1-233ENST00000610733 UNC13AQ9UPW8 1703 aa12.48□□□□□ -0.41
TPM1-233ENST00000610733 NLRP13Q86W25 1043 aa12.48□□□□□ -0.41
TPM1-233ENST00000610733 PKNOX2Q96KN3 472 aa12.47□□□□□ -0.41
TPM1-233ENST00000610733 BRPF3Q9ULD4 1205 aa12.47□□□□□ -0.41
TPM1-233ENST00000610733 CASKIN1Q8WXD9 1431 aa12.47□□□□□ -0.41
TPM1-233ENST00000610733 PODXL2Q9NZ53 605 aa12.47□□□□□ -0.41
TPM1-233ENST00000610733 PNISRQ8TF01 805 aaKnown RBP12.47□□□□□ -0.41
TPM1-233ENST00000610733 UPF2Q9HAU5 1272 aaKnown RBP12.47□□□□□ -0.41
TPM1-233ENST00000610733 TCERG1O14776 1098 aaKnown RBP12.46□□□□□ -0.41
TPM1-233ENST00000610733 HFM1A2PYH4 1435 aa12.46□□□□□ -0.41
TPM1-233ENST00000610733 TMF1P82094 1093 aa12.46□□□□□ -0.42
TPM1-233ENST00000610733 DDRGK1Q96HY6 314 aa12.46□□□□□ -0.42
TPM1-233ENST00000610733 C20orf194Q5TEA3 1177 aa12.45□□□□□ -0.42
TPM1-233ENST00000610733 NCAPD3P42695 1498 aa12.45□□□□□ -0.42
TPM1-233ENST00000610733 MYBBP1AQ9BQG0 1328 aaKnown RBP12.45□□□□□ -0.42
TPM1-233ENST00000610733 PLEKHG5O94827 1062 aa12.45□□□□□ -0.42
TPM1-233ENST00000610733 ADAMTS8Q9UP79 889 aa12.43□□□□□ -0.42
TPM1-233ENST00000610733 APAF1O14727 1248 aa12.43□□□□□ -0.42
TPM1-233ENST00000610733 U2SURPO15042 1029 aaKnown RBP12.43□□□□□ -0.42
TPM1-233ENST00000610733 RALBP1Q15311 655 aa12.43□□□□□ -0.42
TPM1-233ENST00000610733 CDK13Q14004 1512 aaKnown RBP12.42□□□□□ -0.42
TPM1-233ENST00000610733 COG6Q9Y2V7 657 aa12.42□□□□□ -0.42
TPM1-233ENST00000610733 GAPVD1Q14C86 1478 aa12.41□□□□□ -0.42
TPM1-233ENST00000610733 ANKRD30AQ9BXX3 1397 aa12.4□□□□□ -0.42
TPM1-233ENST00000610733 KIF15Q9NS87 1388 aa12.4□□□□□ -0.42
TPM1-233ENST00000610733 POLA1P09884 1462 aaPredicted RBP12.4□□□□□ -0.42
TPM1-233ENST00000610733 JPH4Q96JJ6 628 aa12.39□□□□□ -0.43
TPM1-233ENST00000610733 FOXD4L1Q9NU39 408 aa12.39□□□□□ -0.43
TPM1-233ENST00000610733 FYCO1Q9BQS8 1478 aa12.39□□□□□ -0.43
TPM1-233ENST00000610733 ZBTB7CA1YPR0 619 aa12.39□□□□□ -0.43
TPM1-233ENST00000610733 FTSJ3Q8IY81 847 aaKnown RBP12.39□□□□□ -0.43
TPM1-233ENST00000610733 GOLGA2Q08379 1002 aa12.38□□□□□ -0.43
TPM1-233ENST00000610733 STK26Q9P289 416 aa12.37□□□□□ -0.43
TPM1-233ENST00000610733 PRG4Q92954 1404 aaPredicted RBP12.37□□□□□ -0.43
TPM1-233ENST00000610733 FRAT2O75474 233 aaPredicted RBP12.37□□□□□ -0.43
TPM1-233ENST00000610733 BCAR3O75815 825 aa12.37□□□□□ -0.43
TPM1-233ENST00000610733 NFKBIBQ15653 356 aa12.37□□□□□ -0.43
TPM1-233ENST00000610733 PANK1Q8TE04 598 aa12.37□□□□□ -0.43
TPM1-233ENST00000610733 APBB1O00213 710 aa12.36□□□□□ -0.43
TPM1-233ENST00000610733 NAP1L5Q96NT1 182 aaPredicted RBP12.34□□□□□ -0.43
TPM1-233ENST00000610733 NCLP19338 710 aaKnown RBP12.34□□□□□ -0.43
TPM1-233ENST00000610733 MFAP1P55081 439 aaKnown RBP12.34□□□□□ -0.43
TPM1-233ENST00000610733 BECN1Q14457 450 aa12.34□□□□□ -0.43
TPM1-233ENST00000610733 GSE1Q14687 1217 aa12.34□□□□□ -0.43
TPM1-233ENST00000610733 BACH2Q9BYV9 841 aa12.34□□□□□ -0.43
TPM1-233ENST00000610733 TRAK1Q9UPV9 953 aa12.34□□□□□ -0.43
TPM1-233ENST00000610733 SOX12O15370 315 aa12.34□□□□□ -0.43
TPM1-233ENST00000610733 MORC1Q86VD1 984 aa12.34□□□□□ -0.43
TPM1-233ENST00000610733 GGT6Q6P531 493 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms