RNA–Protein interactions for RNA: ENST00000610088.5

LINC01278-206, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 4 BASIC

Gene LINC01278, Length 554 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-206ENST00000610088 IQSEC2Q5JU85 1478 aa21.75■■□□□ 1.07
LINC01278-206ENST00000610088 ARHGEF12Q9NZN5 1544 aa21.74■■□□□ 1.07
LINC01278-206ENST00000610088 MAGI2Q86UL8 1455 aa21.73■■□□□ 1.07
LINC01278-206ENST00000610088 HECW1Q76N89 1606 aa21.71■■□□□ 1.07
LINC01278-206ENST00000610088 CFAP74Q9C0B2 1584 aa21.7■■□□□ 1.06
LINC01278-206ENST00000610088 PLEKHD1A6NEE1 506 aa21.69■■□□□ 1.06
LINC01278-206ENST00000610088 RAPGEF6Q8TEU7 1601 aa21.69■■□□□ 1.06
LINC01278-206ENST00000610088 ATP10AO60312 1499 aa21.67■■□□□ 1.06
LINC01278-206ENST00000610088 C9orf84Q5VXU9 1444 aa21.67■■□□□ 1.06
LINC01278-206ENST00000610088 SCAPERQ9BY12 1400 aa21.64■■□□□ 1.06
LINC01278-206ENST00000610088 NUP153P49790 1475 aaKnown RBP21.63■■□□□ 1.05
LINC01278-206ENST00000610088 SETD1BQ9UPS6 1966 aaKnown RBP21.63■■□□□ 1.05
LINC01278-206ENST00000610088 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.62■■□□□ 1.058e-6■□□□□ 10.5
LINC01278-206ENST00000610088 SCAF1Q9H7N4 1312 aaKnown RBP21.61■■□□□ 1.05
LINC01278-206ENST00000610088 MED1Q15648 1581 aaPredicted RBP21.6■■□□□ 1.05
LINC01278-206ENST00000610088 ZNF335Q9H4Z2 1342 aaPredicted RBP21.59■■□□□ 1.05
LINC01278-206ENST00000610088 PRXQ9BXM0 1461 aa21.59■■□□□ 1.05
LINC01278-206ENST00000610088 NCOA1Q15788 1441 aa21.59■■□□□ 1.05
LINC01278-206ENST00000610088 PHF23Q9BUL5 403 aaPredicted RBP21.59■■□□□ 1.05
LINC01278-206ENST00000610088 ESF1Q9H501 851 aaKnown RBP21.58■■□□□ 1.05
LINC01278-206ENST00000610088 MYT1LQ9UL68 1186 aa21.58■■□□□ 1.05
LINC01278-206ENST00000610088 HSPA1LP34931 641 aa21.57■■□□□ 1.04
LINC01278-206ENST00000610088 CSRNP3Q8WYN3 585 aa21.56■■□□□ 1.04
LINC01278-206ENST00000610088 RANGAP1P46060 587 aaPredicted RBP21.55■■□□□ 1.04
LINC01278-206ENST00000610088 EEA1Q15075 1411 aa21.55■■□□□ 1.04
LINC01278-206ENST00000610088 NCKAP5LQ9HCH0 1330 aa21.54■■□□□ 1.04
LINC01278-206ENST00000610088 PIP4K2BP78356 416 aa21.53■■□□□ 1.04
LINC01278-206ENST00000610088 TRAPPC8Q9Y2L5 1435 aa21.53■■□□□ 1.04
LINC01278-206ENST00000610088 C3P01024 1663 aa21.51■■□□□ 1.03
LINC01278-206ENST00000610088 SAMD9Q5K651 1589 aa21.51■■□□□ 1.03
LINC01278-206ENST00000610088 CAMSAP1Q5T5Y3 1602 aa21.49■■□□□ 1.03
LINC01278-206ENST00000610088 PLCH2O75038 1416 aa21.48■■□□□ 1.03
LINC01278-206ENST00000610088 EFCAB2Q5VUJ9 269 aa21.46■■□□□ 1.03
LINC01278-206ENST00000610088 AFAP1Q8N556 730 aa21.45■■□□□ 1.02
LINC01278-206ENST00000610088 ZNF518AQ6AHZ1 1483 aa21.41■■□□□ 1.02
LINC01278-206ENST00000610088 TOM1O60784 492 aa21.4■■□□□ 1.02
LINC01278-206ENST00000610088 DIP2CQ9Y2E4 1556 aa21.38■■□□□ 1.01
LINC01278-206ENST00000610088 PKD2Q13563 968 aa21.37■■□□□ 1.01
LINC01278-206ENST00000610088 SENP3Q9H4L4 574 aaPredicted RBP21.36■■□□□ 1.01
LINC01278-206ENST00000610088 CDK13Q14004 1512 aaKnown RBP21.35■■□□□ 1.01
LINC01278-206ENST00000610088 PPP6R1Q9UPN7 881 aa21.35■■□□□ 1.01
LINC01278-206ENST00000610088 CNTLNQ9NXG0 1405 aa21.34■■□□□ 1.01
LINC01278-206ENST00000610088 CHIC1Q5VXU3 224 aa21.33■■□□□ 1.01
LINC01278-206ENST00000610088 KDM5CP41229 1560 aa21.32■■□□□ 1
LINC01278-206ENST00000610088 REREQ9P2R6 1566 aa21.31■■□□□ 1
LINC01278-206ENST00000610088 NPATQ14207 1427 aa21.31■■□□□ 1
LINC01278-206ENST00000610088 AGLP35573 1532 aa21.31■■□□□ 1
LINC01278-206ENST00000610088 ABCA6Q8N139 1617 aa21.31■■□□□ 1
LINC01278-206ENST00000610088 ATP1B4Q9UN42 357 aaPredicted RBP21.31■■□□□ 1
LINC01278-206ENST00000610088 MYO5CQ9NQX4 1742 aa21.3■■□□□ 1
LINC01278-206ENST00000610088 ARHGAP5Q13017 1502 aa21.29■■□□□ 1
LINC01278-206ENST00000610088 PLA2R1Q13018 1463 aa21.27■■□□□ 1
LINC01278-206ENST00000610088 ZMYM3Q14202 1370 aa21.27■■□□□ 1
LINC01278-206ENST00000610088 EHMT2Q96KQ7 1210 aa21.26■□□□□ 0.99
LINC01278-206ENST00000610088 TCOF1Q13428 1488 aaKnown RBP21.26■□□□□ 0.99
LINC01278-206ENST00000610088 MLH3Q9UHC1 1453 aa21.25■□□□□ 0.99
LINC01278-206ENST00000610088 UBTFP17480 764 aaKnown RBP21.24■□□□□ 0.99
LINC01278-206ENST00000610088 SUPT6HQ7KZ85 1726 aaKnown RBP21.22■□□□□ 0.99
LINC01278-206ENST00000610088 CEP170BQ9Y4F5 1589 aaPredicted RBP21.2■□□□□ 0.98
LINC01278-206ENST00000610088 MYO3AQ8NEV4 1616 aa21.2■□□□□ 0.98
LINC01278-206ENST00000610088 RGS17Q9UGC6 210 aaPredicted RBP21.2■□□□□ 0.98
LINC01278-206ENST00000610088 CDK11AQ9UQ88 783 aaPredicted RBP21.2■□□□□ 0.98
LINC01278-206ENST00000610088 CPS1P31327 1500 aa21.19■□□□□ 0.98
LINC01278-206ENST00000610088 KIF14Q15058 1648 aa21.19■□□□□ 0.98
LINC01278-206ENST00000610088 PTPRKQ15262 1439 aa21.18■□□□□ 0.98
LINC01278-206ENST00000610088 MROH2AA6NES4 1674 aa21.18■□□□□ 0.98
LINC01278-206ENST00000610088 ZNF142P52746 1687 aaPredicted RBP21.17■□□□□ 0.98
LINC01278-206ENST00000610088 SHANK2Q9UPX8 1470 aa21.16■□□□□ 0.98
LINC01278-206ENST00000610088 CLTCQ00610 1675 aaKnown RBP21.11■□□□□ 0.97
LINC01278-206ENST00000610088 KIDINS220Q9ULH0 1771 aa21.1■□□□□ 0.97
LINC01278-206ENST00000610088 ALKQ9UM73 1620 aa21.09■□□□□ 0.97
LINC01278-206ENST00000610088 CLIP1P30622 1438 aa21.09■□□□□ 0.97
LINC01278-206ENST00000610088 TROQ12816 1431 aaPredicted RBP21.09■□□□□ 0.97
LINC01278-206ENST00000610088 GGT6Q6P531 493 aa21.08■□□□□ 0.97
LINC01278-206ENST00000610088 ABCC1P33527 1531 aa21.08■□□□□ 0.96
LINC01278-206ENST00000610088 POTEAQ6S8J7 498 aa21.07■□□□□ 0.96
LINC01278-206ENST00000610088 CDC42BPBQ9Y5S2 1711 aa21.06■□□□□ 0.96
LINC01278-206ENST00000610088 A2ML1A8K2U0 1454 aa21.06■□□□□ 0.96
LINC01278-206ENST00000610088 ITSN2Q9NZM3 1697 aa21.05■□□□□ 0.96
LINC01278-206ENST00000610088 DNMT1P26358 1616 aaKnown RBP21.04■□□□□ 0.96
LINC01278-206ENST00000610088 NEURL4Q96JN8 1562 aa21.02■□□□□ 0.96
LINC01278-206ENST00000610088 ZNF777Q9ULD5 760 aaPredicted RBP21.02■□□□□ 0.96
LINC01278-206ENST00000610088 FMN1Q68DA7 1419 aa21.02■□□□□ 0.96
LINC01278-206ENST00000610088 SPAG9O60271 1321 aaKnown RBP21.02■□□□□ 0.95
LINC01278-206ENST00000610088 ANKLE2Q86XL3 938 aa21.01■□□□□ 0.95
LINC01278-206ENST00000610088 VWDEQ8N2E2 1590 aa21.01■□□□□ 0.95
LINC01278-206ENST00000610088 POLR1AO95602 1720 aaPredicted RBP21.01■□□□□ 0.95
LINC01278-206ENST00000610088 ARHGAP35Q9NRY4 1499 aa20.99■□□□□ 0.95
LINC01278-206ENST00000610088 SAMD9LQ8IVG5 1584 aa20.98■□□□□ 0.95
LINC01278-206ENST00000610088 PREX2Q70Z35 1606 aa20.97■□□□□ 0.95
LINC01278-206ENST00000610088 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.97■□□□□ 0.95
LINC01278-206ENST00000610088 HNRNPMP52272 730 aaKnown RBP eCLIP20.94■□□□□ 0.94
LINC01278-206ENST00000610088 NPHP4O75161 1426 aaPredicted RBP20.94■□□□□ 0.94
LINC01278-206ENST00000610088 A2MP01023 1474 aa20.94■□□□□ 0.94
LINC01278-206ENST00000610088 FBXO31Q5XUX0 539 aaPredicted RBP20.93■□□□□ 0.94
LINC01278-206ENST00000610088 TNRQ92752 1358 aa20.93■□□□□ 0.94
LINC01278-206ENST00000610088 LRRC7Q96NW7 1537 aa20.92■□□□□ 0.94
LINC01278-206ENST00000610088 SETD1AO15047 1707 aaKnown RBP20.92■□□□□ 0.94
LINC01278-206ENST00000610088 RNF17Q9BXT8 1623 aaKnown RBP20.91■□□□□ 0.94
LINC01278-206ENST00000610088 THEMISQ8N1K5 641 aaPredicted RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 172.3 ms