RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 KIF14Q15058 1648 aa17.22■□□□□ 0.35
USP6NL-206ENST00000609853 ABCC5O15440 1437 aa17.22■□□□□ 0.35
USP6NL-206ENST00000609853 NEUROD1Q13562 356 aa17.21■□□□□ 0.35
USP6NL-206ENST00000609853 RRP7BPQ9NSQ0 103 aa17.21■□□□□ 0.35
USP6NL-206ENST00000609853 CFDP1Q9UEE9 299 aaPredicted RBP17.21■□□□□ 0.35
USP6NL-206ENST00000609853 CHIC2Q9UKJ5 165 aa17.2■□□□□ 0.34
USP6NL-206ENST00000609853 CAMSAP2Q08AD1 1489 aa17.2■□□□□ 0.34
USP6NL-206ENST00000609853 CENPBP07199 599 aaPredicted RBP17.19■□□□□ 0.34
USP6NL-206ENST00000609853 PPP1R15AO75807 674 aaPredicted RBP17.18■□□□□ 0.34
USP6NL-206ENST00000609853 ADGBQ8N7X0 1667 aa17.18■□□□□ 0.34
USP6NL-206ENST00000609853 TONSLQ96HA7 1378 aa17.18■□□□□ 0.34
USP6NL-206ENST00000609853 CDC42BPAQ5VT25 1732 aa17.17■□□□□ 0.34
USP6NL-206ENST00000609853 ABCC10Q5T3U5 1492 aa17.17■□□□□ 0.34
USP6NL-206ENST00000609853 CROCC2H7BZ55 1655 aa17.16■□□□□ 0.34
USP6NL-206ENST00000609853 ADGRL2O95490 1459 aa17.15■□□□□ 0.34
USP6NL-206ENST00000609853 MIER1Q8N108 512 aa17.15■□□□□ 0.34
USP6NL-206ENST00000609853 KDM6BO15054 1643 aa17.14■□□□□ 0.33
USP6NL-206ENST00000609853 ZNF644Q9H582 1327 aaPredicted RBP17.13■□□□□ 0.33
USP6NL-206ENST00000609853 TRIM52Q96A61 297 aa17.13■□□□□ 0.33
USP6NL-206ENST00000609853 SHANK2Q9UPX8 1470 aa17.12■□□□□ 0.33
USP6NL-206ENST00000609853 CLASP1Q7Z460 1538 aa17.11■□□□□ 0.33
USP6NL-206ENST00000609853 NCOA1Q15788 1441 aa17.11■□□□□ 0.33
USP6NL-206ENST00000609853 MPHOSPH9Q99550 1183 aa17.1■□□□□ 0.33
USP6NL-206ENST00000609853 ABCC2Q92887 1545 aa17.09■□□□□ 0.33
USP6NL-206ENST00000609853 DENND4BO75064 1496 aaPredicted RBP17.09■□□□□ 0.33
USP6NL-206ENST00000609853 ANKRD30AQ9BXX3 1397 aa17.09■□□□□ 0.33
USP6NL-206ENST00000609853 ARHGEF5Q12774 1597 aa17.08■□□□□ 0.32
USP6NL-206ENST00000609853 PREX2Q70Z35 1606 aa17.06■□□□□ 0.32
USP6NL-206ENST00000609853 RSPH4AQ5TD94 716 aa17.05■□□□□ 0.32
USP6NL-206ENST00000609853 UHRF1BP1LA0JNW5 1464 aa17.05■□□□□ 0.32
USP6NL-206ENST00000609853 ZNF777Q9ULD5 760 aaPredicted RBP17.04■□□□□ 0.32
USP6NL-206ENST00000609853 KDM5BQ9UGL1 1544 aa17.02■□□□□ 0.32
USP6NL-206ENST00000609853 CDC42BPBQ9Y5S2 1711 aa17.02■□□□□ 0.32
USP6NL-206ENST00000609853 ANKRD30BQ9BXX2 1392 aa17.02■□□□□ 0.31
USP6NL-206ENST00000609853 ERCC6L2Q5T890 1561 aa17.01■□□□□ 0.31
USP6NL-206ENST00000609853 C9orf84Q5VXU9 1444 aa17.01■□□□□ 0.31
USP6NL-206ENST00000609853 TSPY4P0CV99 314 aa17.01■□□□□ 0.31
USP6NL-206ENST00000609853 TSPY10P0CW01 314 aa17.01■□□□□ 0.31
USP6NL-206ENST00000609853 ANKRD50Q9ULJ7 1429 aa17■□□□□ 0.31
USP6NL-206ENST00000609853 RPRD2Q5VT52 1461 aaKnown RBP17■□□□□ 0.31
USP6NL-206ENST00000609853 SLC4A1APQ9BWU0 796 aaKnown RBP16.99■□□□□ 0.31
USP6NL-206ENST00000609853 PZPP20742 1482 aa16.98■□□□□ 0.31
USP6NL-206ENST00000609853 MBD5Q9P267 1494 aa16.98■□□□□ 0.31
USP6NL-206ENST00000609853 CCDC141Q6ZP82 1450 aa16.98■□□□□ 0.31
USP6NL-206ENST00000609853 PLEKHH2Q8IVE3 1493 aa16.98■□□□□ 0.31
USP6NL-206ENST00000609853 SAMD9LQ8IVG5 1584 aa16.98■□□□□ 0.31
USP6NL-206ENST00000609853 MYO5CQ9NQX4 1742 aa16.97■□□□□ 0.31
USP6NL-206ENST00000609853 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.96■□□□□ 0.31
USP6NL-206ENST00000609853 MAST1Q9Y2H9 1570 aa16.95■□□□□ 0.3
USP6NL-206ENST00000609853 KDM5DQ9BY66 1539 aa16.95■□□□□ 0.3
USP6NL-206ENST00000609853 SCAF1Q9H7N4 1312 aaKnown RBP16.95■□□□□ 0.3
USP6NL-206ENST00000609853 ZCCHC11Q5TAX3 1644 aaKnown RBP16.95■□□□□ 0.3
USP6NL-206ENST00000609853 TTC37Q6PGP7 1564 aa16.95■□□□□ 0.3
USP6NL-206ENST00000609853 KIAA1107Q9UPP5 1409 aa16.94■□□□□ 0.3
USP6NL-206ENST00000609853 ARHGAP5Q13017 1502 aa16.93■□□□□ 0.3
USP6NL-206ENST00000609853 KIF15Q9NS87 1388 aa16.91■□□□□ 0.3
USP6NL-206ENST00000609853 HNRNPMP52272 730 aaKnown RBP eCLIP16.9■□□□□ 0.34e-6■■□□□ 11.6
USP6NL-206ENST00000609853 L3MBTL2Q969R5 705 aa16.9■□□□□ 0.3
USP6NL-206ENST00000609853 TEX14Q8IWB6 1497 aa16.9■□□□□ 0.3
USP6NL-206ENST00000609853 YTHDC1Q96MU7 727 aaKnown RBP16.89■□□□□ 0.29
USP6NL-206ENST00000609853 PLCH2O75038 1416 aa16.88■□□□□ 0.29
USP6NL-206ENST00000609853 ARAP3Q8WWN8 1544 aa16.88■□□□□ 0.29
USP6NL-206ENST00000609853 SYCP2Q9BX26 1530 aa16.88■□□□□ 0.29
USP6NL-206ENST00000609853 DDX10Q13206 875 aaKnown RBP16.87■□□□□ 0.29
USP6NL-206ENST00000609853 PLXNC1O60486 1568 aa16.87■□□□□ 0.29
USP6NL-206ENST00000609853 NUP155O75694 1391 aa16.86■□□□□ 0.29
USP6NL-206ENST00000609853 EIF4G2P78344 907 aaKnown RBP eCLIP16.85■□□□□ 0.29
USP6NL-206ENST00000609853 PKD2Q13563 968 aa16.85■□□□□ 0.29
USP6NL-206ENST00000609853 EFCAB2Q5VUJ9 269 aa16.84■□□□□ 0.29
USP6NL-206ENST00000609853 UNC13BO14795 1591 aa16.81■□□□□ 0.28
USP6NL-206ENST00000609853 KCNH8Q96L42 1107 aa16.81■□□□□ 0.28
USP6NL-206ENST00000609853 DUOX2Q9NRD8 1548 aa16.8■□□□□ 0.28
USP6NL-206ENST00000609853 CCER2I3L3R5 266 aa16.8■□□□□ 0.28
USP6NL-206ENST00000609853 ABCC1P33527 1531 aa16.8■□□□□ 0.28
USP6NL-206ENST00000609853 HSPA5P11021 654 aaKnown RBP16.79■□□□□ 0.28
USP6NL-206ENST00000609853 HIRIP3Q9BW71 556 aaPredicted RBP16.79■□□□□ 0.28
USP6NL-206ENST00000609853 GTF3C3Q9Y5Q9 886 aa16.79■□□□□ 0.28
USP6NL-206ENST00000609853 ARHGEF12Q9NZN5 1544 aa16.79■□□□□ 0.28
USP6NL-206ENST00000609853 ANP32CO43423 234 aa16.79■□□□□ 0.28
USP6NL-206ENST00000609853 WDR7Q9Y4E6 1490 aa16.78■□□□□ 0.28
USP6NL-206ENST00000609853 FAM135AQ9P2D6 1515 aa16.78■□□□□ 0.28
USP6NL-206ENST00000609853 ERBINQ96RT1 1412 aa16.77■□□□□ 0.28
USP6NL-206ENST00000609853 PLPPR3Q6T4P5 718 aa16.77■□□□□ 0.28
USP6NL-206ENST00000609853 POLR1AO95602 1720 aaPredicted RBP16.76■□□□□ 0.27
USP6NL-206ENST00000609853 RTEL1-TNFRSF6BF6WH68 1400 aa16.75■□□□□ 0.27
USP6NL-206ENST00000609853 UHRF1BP1Q6BDS2 1440 aa16.75■□□□□ 0.27
USP6NL-206ENST00000609853 NBPF8Q3BBV2 869 aa16.75■□□□□ 0.27
USP6NL-206ENST00000609853 IQGAP3Q86VI3 1631 aa16.75■□□□□ 0.27
USP6NL-206ENST00000609853 ABCA9Q8IUA7 1624 aa16.74■□□□□ 0.27
USP6NL-206ENST00000609853 OSCARQ8IYS5 282 aa16.74■□□□□ 0.27
USP6NL-206ENST00000609853 SPATA31E1Q6ZUB1 1445 aa16.74■□□□□ 0.27
USP6NL-206ENST00000609853 MAGI2Q86UL8 1455 aa16.73■□□□□ 0.27
USP6NL-206ENST00000609853 WASHC2AQ641Q2 1341 aa16.71■□□□□ 0.27
USP6NL-206ENST00000609853 POTEDQ86YR6 584 aa16.7■□□□□ 0.26
USP6NL-206ENST00000609853 CCDC7Q96M83 1385 aa16.68■□□□□ 0.26
USP6NL-206ENST00000609853 ATP10AO60312 1499 aa16.68■□□□□ 0.26
USP6NL-206ENST00000609853 RALGAPBQ86X10 1494 aa16.68■□□□□ 0.26
USP6NL-206ENST00000609853 TRAPPC8Q9Y2L5 1435 aa16.68■□□□□ 0.26
USP6NL-206ENST00000609853 CCDC144AA2RUR9 1427 aa16.67■□□□□ 0.26
USP6NL-206ENST00000609853 ASXL2Q76L83 1435 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms