RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 SRPK2P78362 688 aaKnown RBP16.55■□□□□ 0.24
USP6NL-205ENST00000609104 RTF1Q92541 710 aaKnown RBP16.54■□□□□ 0.24
USP6NL-205ENST00000609104 PTMSP20962 102 aa16.54■□□□□ 0.24
USP6NL-205ENST00000609104 MORC1Q86VD1 984 aa16.53■□□□□ 0.24
USP6NL-205ENST00000609104 TNNT3P45378 269 aaPredicted RBP16.52■□□□□ 0.24
USP6NL-205ENST00000609104 SAFB2Q14151 953 aaKnown RBP eCLIP16.52■□□□□ 0.23
USP6NL-205ENST00000609104 ITPRIPQ8IWB1 547 aa16.48■□□□□ 0.23
USP6NL-205ENST00000609104 SYAP1Q96A49 352 aaPredicted RBP16.48■□□□□ 0.23
USP6NL-205ENST00000609104 RCAN3Q9UKA8 241 aa16.48■□□□□ 0.23
USP6NL-205ENST00000609104 IPO8O15397 1037 aaKnown RBP16.47■□□□□ 0.23
USP6NL-205ENST00000609104 EEA1Q15075 1411 aa16.46■□□□□ 0.23
USP6NL-205ENST00000609104 TPM4P67936 248 aa16.46■□□□□ 0.23
USP6NL-205ENST00000609104 CCER2I3L3R5 266 aa16.46■□□□□ 0.23
USP6NL-205ENST00000609104 HSP90B1P14625 803 aaKnown RBP16.46■□□□□ 0.23
USP6NL-205ENST00000609104 GOLGA6L3A6NEY3 463 aa16.45■□□□□ 0.22
USP6NL-205ENST00000609104 MFAP1P55081 439 aaKnown RBP16.45■□□□□ 0.22
USP6NL-205ENST00000609104 PDE4CQ08493 712 aa16.44■□□□□ 0.22
USP6NL-205ENST00000609104 GOLGA6L1Q8N7Z2 621 aa16.44■□□□□ 0.22
USP6NL-205ENST00000609104 A0A0U1RQG5 324 aaPredicted RBP16.44■□□□□ 0.22
USP6NL-205ENST00000609104 STK26Q9P289 416 aa16.44■□□□□ 0.22
USP6NL-205ENST00000609104 FOXD4L1Q9NU39 408 aa16.43■□□□□ 0.22
USP6NL-205ENST00000609104 HTATSF1O43719 755 aaKnown RBP16.43■□□□□ 0.22
USP6NL-205ENST00000609104 CREBRFQ8IUR6 639 aa16.43■□□□□ 0.22
USP6NL-205ENST00000609104 RWDD1Q9H446 243 aaPredicted RBP16.43■□□□□ 0.22
USP6NL-205ENST00000609104 TRIM6-TRIM34B2RNG4 842 aa16.43■□□□□ 0.22
USP6NL-205ENST00000609104 CEP164Q9UPV0 1460 aa16.42■□□□□ 0.22
USP6NL-205ENST00000609104 HSPA5P11021 654 aaKnown RBP16.42■□□□□ 0.22
USP6NL-205ENST00000609104 KTN1Q86UP2 1357 aaKnown RBP16.42■□□□□ 0.22
USP6NL-205ENST00000609104 TCERG1O14776 1098 aaKnown RBP16.42■□□□□ 0.22
USP6NL-205ENST00000609104 PRM3Q9NNZ6 103 aa16.41■□□□□ 0.22
USP6NL-205ENST00000609104 CALD1Q05682 793 aaKnown RBP16.41■□□□□ 0.22
USP6NL-205ENST00000609104 CCNB3Q8WWL7 1395 aa16.41■□□□□ 0.22
USP6NL-205ENST00000609104 KANK1Q14678 1352 aa16.4■□□□□ 0.22
USP6NL-205ENST00000609104 KIF27Q86VH2 1401 aa16.4■□□□□ 0.22
USP6NL-205ENST00000609104 ZNF330Q9Y3S2 320 aaPredicted RBP16.4■□□□□ 0.22
USP6NL-205ENST00000609104 PMFBP1Q8TBY8 1022 aa16.4■□□□□ 0.22
USP6NL-205ENST00000609104 TNIKQ9UKE5 1360 aa16.39■□□□□ 0.21
USP6NL-205ENST00000609104 NOL8Q76FK4 1167 aaKnown RBP16.39■□□□□ 0.21
USP6NL-205ENST00000609104 PAK3O75914 559 aaPredicted RBP16.38■□□□□ 0.21
USP6NL-205ENST00000609104 MLECQ14165 292 aa16.38■□□□□ 0.21
USP6NL-205ENST00000609104 CHMP3Q9Y3E7 222 aa16.38■□□□□ 0.21
USP6NL-205ENST00000609104 EIF4G1Q04637 1599 aaKnown RBP16.38■□□□□ 0.21
USP6NL-205ENST00000609104 U2AF1L5P0DN76 240 aaPredicted RBP16.38■□□□□ 0.21
USP6NL-205ENST00000609104 U2AF1Q01081 240 aaKnown RBP eCLIP16.38■□□□□ 0.21
USP6NL-205ENST00000609104 FOXD1Q16676 465 aa16.38■□□□□ 0.21
USP6NL-205ENST00000609104 IPO9Q96P70 1041 aaKnown RBP16.38■□□□□ 0.21
USP6NL-205ENST00000609104 WRNQ14191 1432 aaPredicted RBP eCLIP16.37■□□□□ 0.21
USP6NL-205ENST00000609104 FOXD4L5Q5VV16 416 aaPredicted RBP16.36■□□□□ 0.21
USP6NL-205ENST00000609104 FOXD4L4Q8WXT5 416 aaPredicted RBP16.36■□□□□ 0.21
USP6NL-205ENST00000609104 GPATCH3Q96I76 525 aa16.36■□□□□ 0.21
USP6NL-205ENST00000609104 CSPP1Q1MSJ5 1256 aa16.36■□□□□ 0.21
USP6NL-205ENST00000609104 GORABQ5T7V8 394 aa16.36■□□□□ 0.21
USP6NL-205ENST00000609104 HDGFL2Q7Z4V5 671 aaPredicted RBP16.35■□□□□ 0.21
USP6NL-205ENST00000609104 SMC4Q9NTJ3 1288 aa16.34■□□□□ 0.21
USP6NL-205ENST00000609104 HDGFP51858 240 aaKnown RBP16.33■□□□□ 0.21
USP6NL-205ENST00000609104 ROCK2O75116 1388 aaKnown RBP16.33■□□□□ 0.2
USP6NL-205ENST00000609104 TAF7LQ5H9L4 462 aa16.32■□□□□ 0.2
USP6NL-205ENST00000609104 ANO8Q9HCE9 1232 aaPredicted RBP16.32■□□□□ 0.2
USP6NL-205ENST00000609104 RASSF8Q8NHQ8 419 aa16.32■□□□□ 0.2
USP6NL-205ENST00000609104 TSHZ2Q9NRE2 1034 aa16.32■□□□□ 0.2
USP6NL-205ENST00000609104 PHF14O94880 888 aa16.32■□□□□ 0.2
USP6NL-205ENST00000609104 SLC4A10Q6U841 1118 aa16.31■□□□□ 0.2
USP6NL-205ENST00000609104 HSP90AA2PQ14568 343 aaPredicted RBP16.31■□□□□ 0.2
USP6NL-205ENST00000609104 CCDC34Q96HJ3 373 aa16.31■□□□□ 0.2
USP6NL-205ENST00000609104 SETD5Q9C0A6 1442 aa16.31■□□□□ 0.2
USP6NL-205ENST00000609104 CCDC146Q8IYE0 955 aa16.3■□□□□ 0.2
USP6NL-205ENST00000609104 FHAD1B1AJZ9 1412 aa16.29■□□□□ 0.2
USP6NL-205ENST00000609104 RALBP1Q15311 655 aa16.28■□□□□ 0.2
USP6NL-205ENST00000609104 CLUAP1Q96AJ1 413 aa16.28■□□□□ 0.2
USP6NL-205ENST00000609104 CSB-PGBD3P0DP91 1061 aa16.27■□□□□ 0.2
USP6NL-205ENST00000609104 SPAG9O60271 1321 aaKnown RBP16.27■□□□□ 0.2
USP6NL-205ENST00000609104 STK31Q9BXU1 1019 aa16.27■□□□□ 0.2
USP6NL-205ENST00000609104 PES1O00541 588 aaKnown RBP16.27■□□□□ 0.19
USP6NL-205ENST00000609104 BAZ1BQ9UIG0 1483 aaKnown RBP16.27■□□□□ 0.19
USP6NL-205ENST00000609104 SF3A1Q15459 793 aaKnown RBP16.26■□□□□ 0.19
USP6NL-205ENST00000609104 PKD2Q13563 968 aa16.26■□□□□ 0.19
USP6NL-205ENST00000609104 ST18O60284 1047 aa16.26■□□□□ 0.19
USP6NL-205ENST00000609104 TPM3P06753 285 aa16.26■□□□□ 0.19
USP6NL-205ENST00000609104 FOXD4L6Q3SYB3 417 aaPredicted RBP16.26■□□□□ 0.19
USP6NL-205ENST00000609104 FOXD4L3Q6VB84 417 aaPredicted RBP16.26■□□□□ 0.19
USP6NL-205ENST00000609104 GGT6Q6P531 493 aa16.26■□□□□ 0.19
USP6NL-205ENST00000609104 KIF16BQ96L93 1317 aa16.26■□□□□ 0.19
USP6NL-205ENST00000609104 USP35Q9P2H5 1018 aa16.25■□□□□ 0.19
USP6NL-205ENST00000609104 ARHGAP35Q9NRY4 1499 aa16.25■□□□□ 0.19
USP6NL-205ENST00000609104 CEP89Q96ST8 783 aa16.25■□□□□ 0.19
USP6NL-205ENST00000609104 TIMELESSQ9UNS1 1208 aa16.24■□□□□ 0.19
USP6NL-205ENST00000609104 TMX4Q9H1E5 349 aaPredicted RBP16.24■□□□□ 0.19
USP6NL-205ENST00000609104 HMMRO75330 724 aa16.24■□□□□ 0.19
USP6NL-205ENST00000609104 CCAR2Q8N163 923 aaKnown RBP16.24■□□□□ 0.19
USP6NL-205ENST00000609104 TPD52L1Q16890 204 aaPredicted RBP16.24■□□□□ 0.19
USP6NL-205ENST00000609104 RB1CC1Q8TDY2 1594 aa16.23■□□□□ 0.19
USP6NL-205ENST00000609104 SETQ01105 290 aaPredicted RBP16.23■□□□□ 0.19
USP6NL-205ENST00000609104 H3BQV1 296 aa16.22■□□□□ 0.19
USP6NL-205ENST00000609104 IFFO2Q5TF58 517 aa16.22■□□□□ 0.19
USP6NL-205ENST00000609104 DDX11L8A8MPP1 907 aa16.22■□□□□ 0.19
USP6NL-205ENST00000609104 ERCC6Q03468 1493 aa16.21■□□□□ 0.19
USP6NL-205ENST00000609104 VPS53Q5VIR6 699 aa16.21■□□□□ 0.19
USP6NL-205ENST00000609104 GOLGA6L19H0YKK7 550 aa16.21■□□□□ 0.19
USP6NL-205ENST00000609104 CENPJQ9HC77 1338 aaPredicted RBP16.21■□□□□ 0.18
USP6NL-205ENST00000609104 SLC4A3P48751 1232 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms