RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 CALD1Q05682 793 aaKnown RBP6.32□□□□□ -1.4
HDDC2-208ENST00000609021 FAM43AQ8N2R8 423 aa6.32□□□□□ -1.4
HDDC2-208ENST00000609021 STAC3Q96MF2 364 aa6.32□□□□□ -1.4
HDDC2-208ENST00000609021 ZBTB47Q9UFB7 747 aaPredicted RBP6.32□□□□□ -1.4
HDDC2-208ENST00000609021 TARBP1Q13395 1621 aaKnown RBP6.32□□□□□ -1.4
HDDC2-208ENST00000609021 ANP32BQ92688 251 aaKnown RBP6.32□□□□□ -1.4
HDDC2-208ENST00000609021 CLGNO14967 610 aa6.31□□□□□ -1.4
HDDC2-208ENST00000609021 ITGAEP38570 1179 aa6.31□□□□□ -1.4
HDDC2-208ENST00000609021 ANP32AP39687 249 aaKnown RBP6.3□□□□□ -1.4
HDDC2-208ENST00000609021 TRIM41Q8WV44 630 aa6.3□□□□□ -1.4
HDDC2-208ENST00000609021 ABCA5Q8WWZ7 1642 aa6.29□□□□□ -1.4
HDDC2-208ENST00000609021 IRX3P78415 501 aaPredicted RBP6.29□□□□□ -1.4
HDDC2-208ENST00000609021 OS9Q13438 667 aaPredicted RBP6.29□□□□□ -1.4
HDDC2-208ENST00000609021 PNNQ9H307 717 aaKnown RBP6.29□□□□□ -1.4
HDDC2-208ENST00000609021 DNAJC5BQ9UF47 199 aa6.29□□□□□ -1.4
HDDC2-208ENST00000609021 DNTTIP2Q5QJE6 756 aaKnown RBP6.28□□□□□ -1.4
HDDC2-208ENST00000609021 NESP48681 1621 aa6.26□□□□□ -1.41
HDDC2-208ENST00000609021 KIF21BO75037 1637 aa6.26□□□□□ -1.41
HDDC2-208ENST00000609021 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.26□□□□□ -1.41
HDDC2-208ENST00000609021 CHRM1P11229 460 aaPredicted RBP6.25□□□□□ -1.41
HDDC2-208ENST00000609021 PDCL3Q9H2J4 239 aa6.25□□□□□ -1.41
HDDC2-208ENST00000609021 DNMBPQ6XZF7 1577 aa6.25□□□□□ -1.41
HDDC2-208ENST00000609021 HDAC5Q9UQL6 1122 aa6.25□□□□□ -1.41
HDDC2-208ENST00000609021 PBRM1Q86U86 1689 aa6.25□□□□□ -1.41
HDDC2-208ENST00000609021 URB2Q14146 1524 aaKnown RBP6.25□□□□□ -1.41
HDDC2-208ENST00000609021 LRRIQ1Q96JM4 1722 aa6.25□□□□□ -1.41
HDDC2-208ENST00000609021 WDR62O43379 1518 aa6.24□□□□□ -1.41
HDDC2-208ENST00000609021 ZNF622Q969S3 477 aaKnown RBP eCLIP6.24□□□□□ -1.41
HDDC2-208ENST00000609021 RUSC2Q8N2Y8 1516 aa6.24□□□□□ -1.41
HDDC2-208ENST00000609021 VGLL3A8MV65 326 aa6.24□□□□□ -1.41
HDDC2-208ENST00000609021 RNF216Q9NWF9 866 aaPredicted RBP6.24□□□□□ -1.41
HDDC2-208ENST00000609021 MCCP23508 829 aa6.23□□□□□ -1.41
HDDC2-208ENST00000609021 TRIM44Q96DX7 344 aaPredicted RBP6.23□□□□□ -1.41
HDDC2-208ENST00000609021 GSE1Q14687 1217 aa6.22□□□□□ -1.41
HDDC2-208ENST00000609021 AXDND1Q5T1B0 1012 aaPredicted RBP6.22□□□□□ -1.41
HDDC2-208ENST00000609021 PUS7Q96PZ0 661 aaKnown RBP6.22□□□□□ -1.41
HDDC2-208ENST00000609021 PRDM4Q9UKN5 801 aa6.22□□□□□ -1.41
HDDC2-208ENST00000609021 CC2D1BQ5T0F9 858 aaKnown RBP6.22□□□□□ -1.41
HDDC2-208ENST00000609021 KCNG1Q9UIX4 513 aa6.21□□□□□ -1.41
HDDC2-208ENST00000609021 ARID3AQ99856 593 aa6.21□□□□□ -1.42
HDDC2-208ENST00000609021 FAM43BQ6ZT52 329 aaPredicted RBP6.21□□□□□ -1.42
HDDC2-208ENST00000609021 ZNF830Q96NB3 372 aaPredicted RBP6.21□□□□□ -1.42
HDDC2-208ENST00000609021 TMED8Q6PL24 325 aaPredicted RBP6.2□□□□□ -1.42
HDDC2-208ENST00000609021 RGS22Q8NE09 1264 aa6.2□□□□□ -1.42
HDDC2-208ENST00000609021 ZHX1Q9UKY1 873 aaPredicted RBP6.2□□□□□ -1.42
HDDC2-208ENST00000609021 WASHC2CQ9Y4E1 1318 aa6.2□□□□□ -1.42
HDDC2-208ENST00000609021 CADPSQ9ULU8 1353 aa6.19□□□□□ -1.42
HDDC2-208ENST00000609021 PAK3O75914 559 aaPredicted RBP6.19□□□□□ -1.42
HDDC2-208ENST00000609021 PHF14O94880 888 aa6.19□□□□□ -1.42
HDDC2-208ENST00000609021 SETQ01105 290 aaPredicted RBP6.19□□□□□ -1.42
HDDC2-208ENST00000609021 TOPBP1Q92547 1522 aa6.19□□□□□ -1.42
HDDC2-208ENST00000609021 CTTNBP2Q8WZ74 1663 aa6.19□□□□□ -1.42
HDDC2-208ENST00000609021 E9PSI1 815 aa6.19□□□□□ -1.42
HDDC2-208ENST00000609021 GPATCH11Q8N954 259 aa6.19□□□□□ -1.42
HDDC2-208ENST00000609021 GRIPAP1Q4V328 841 aa6.18□□□□□ -1.42
HDDC2-208ENST00000609021 IPO9Q96P70 1041 aaKnown RBP6.18□□□□□ -1.42
HDDC2-208ENST00000609021 CWC22Q9HCG8 908 aaKnown RBP6.18□□□□□ -1.42
HDDC2-208ENST00000609021 CUX2O14529 1486 aa6.18□□□□□ -1.42
HDDC2-208ENST00000609021 SOX12O15370 315 aa6.18□□□□□ -1.42
HDDC2-208ENST00000609021 CENPJQ9HC77 1338 aaPredicted RBP6.17□□□□□ -1.42
HDDC2-208ENST00000609021 ANAPC15P60006 121 aa6.17□□□□□ -1.42
HDDC2-208ENST00000609021 MAP7D2Q96T17 732 aa6.17□□□□□ -1.42
HDDC2-208ENST00000609021 SOGA1O94964 1423 aa6.17□□□□□ -1.42
HDDC2-208ENST00000609021 CERS3Q8IU89 383 aa6.16□□□□□ -1.42
HDDC2-208ENST00000609021 ABCA10Q8WWZ4 1543 aa6.16□□□□□ -1.42
HDDC2-208ENST00000609021 FANCD2Q9BXW9 1451 aa6.16□□□□□ -1.42
HDDC2-208ENST00000609021 WRNQ14191 1432 aaPredicted RBP eCLIP6.16□□□□□ -1.42
HDDC2-208ENST00000609021 WASHC2AQ641Q2 1341 aa6.16□□□□□ -1.42
HDDC2-208ENST00000609021 ERICH3Q5RHP9 1530 aa6.16□□□□□ -1.42
HDDC2-208ENST00000609021 PRXQ9BXM0 1461 aa6.16□□□□□ -1.42
HDDC2-208ENST00000609021 NPM1P06748 294 aaKnown RBP eCLIP6.16□□□□□ -1.42
HDDC2-208ENST00000609021 TAF3Q5VWG9 929 aa6.16□□□□□ -1.42
HDDC2-208ENST00000609021 LAS1LQ9Y4W2 734 aaKnown RBP6.16□□□□□ -1.42
HDDC2-208ENST00000609021 AEBP1Q8IUX7 1158 aa6.15□□□□□ -1.42
HDDC2-208ENST00000609021 SMAP1Q8IYB5 467 aaPredicted RBP6.15□□□□□ -1.43
HDDC2-208ENST00000609021 POLA1P09884 1462 aaPredicted RBP6.15□□□□□ -1.43
HDDC2-208ENST00000609021 TPM2P07951 284 aa6.15□□□□□ -1.43
HDDC2-208ENST00000609021 CACNB1Q02641 598 aaPredicted RBP6.15□□□□□ -1.43
HDDC2-208ENST00000609021 DNAJC2Q99543 621 aaKnown RBP6.15□□□□□ -1.43
HDDC2-208ENST00000609021 CUL7Q14999 1698 aa6.14□□□□□ -1.43
HDDC2-208ENST00000609021 MYCNP04198 464 aaPredicted RBP6.14□□□□□ -1.43
HDDC2-208ENST00000609021 PPP4R3BQ5MIZ7 849 aa6.14□□□□□ -1.43
HDDC2-208ENST00000609021 TMEM51Q9NW97 253 aa6.14□□□□□ -1.43
HDDC2-208ENST00000609021 VGFO15240 615 aaPredicted RBP6.14□□□□□ -1.43
HDDC2-208ENST00000609021 NPM3O75607 178 aaKnown RBP6.14□□□□□ -1.43
HDDC2-208ENST00000609021 DDRGK1Q96HY6 314 aa6.13□□□□□ -1.43
HDDC2-208ENST00000609021 FGD5Q6ZNL6 1462 aa6.13□□□□□ -1.43
HDDC2-208ENST00000609021 FAM9BQ8IZU0 186 aa6.12□□□□□ -1.43
HDDC2-208ENST00000609021 EIF4G3O43432 1585 aaKnown RBP6.12□□□□□ -1.43
HDDC2-208ENST00000609021 SAMD9Q5K651 1589 aa6.12□□□□□ -1.43
HDDC2-208ENST00000609021 ZBTB7CA1YPR0 619 aa6.12□□□□□ -1.43
HDDC2-208ENST00000609021 POTEHQ6S545 545 aa6.12□□□□□ -1.43
HDDC2-208ENST00000609021 PRDM16Q9HAZ2 1276 aa6.12□□□□□ -1.43
HDDC2-208ENST00000609021 ADAMTS12P58397 1594 aa6.12□□□□□ -1.43
HDDC2-208ENST00000609021 HOXD11P31277 338 aaPredicted RBP6.12□□□□□ -1.43
HDDC2-208ENST00000609021 FAM50AQ14320 339 aaKnown RBP6.11□□□□□ -1.43
HDDC2-208ENST00000609021 MTERF4Q7Z6M4 381 aaKnown RBP6.1□□□□□ -1.43
HDDC2-208ENST00000609021 RALBP1Q15311 655 aa6.09□□□□□ -1.43
HDDC2-208ENST00000609021 L1TD1Q5T7N2 865 aaKnown RBP6.09□□□□□ -1.43
HDDC2-208ENST00000609021 FRAT1Q92837 279 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms