RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 MYO5CQ9NQX4 1742 aa17.58■□□□□ 0.41
CTCFL-221ENST00000608903 PLCH2O75038 1416 aa17.58■□□□□ 0.41
CTCFL-221ENST00000608903 ITGAEP38570 1179 aa17.57■□□□□ 0.4
CTCFL-221ENST00000608903 ZNF777Q9ULD5 760 aaPredicted RBP17.57■□□□□ 0.4
CTCFL-221ENST00000608903 PTPRKQ15262 1439 aa17.57■□□□□ 0.4
CTCFL-221ENST00000608903 CAMSAP2Q08AD1 1489 aa17.56■□□□□ 0.4
CTCFL-221ENST00000608903 SAMD9LQ8IVG5 1584 aa17.55■□□□□ 0.4
CTCFL-221ENST00000608903 ARHGAP5Q13017 1502 aa17.54■□□□□ 0.4
CTCFL-221ENST00000608903 DIP2BQ9P265 1576 aa17.53■□□□□ 0.4
CTCFL-221ENST00000608903 GLI2P10070 1586 aa17.52■□□□□ 0.4
CTCFL-221ENST00000608903 CD109Q6YHK3 1445 aa17.52■□□□□ 0.39
CTCFL-221ENST00000608903 FAM69CQ0P6D2 419 aa17.51■□□□□ 0.39
CTCFL-221ENST00000608903 ARAP3Q8WWN8 1544 aa17.5■□□□□ 0.39
CTCFL-221ENST00000608903 ABCC5O15440 1437 aa17.5■□□□□ 0.39
CTCFL-221ENST00000608903 MAP3K4Q9Y6R4 1608 aa17.5■□□□□ 0.39
CTCFL-221ENST00000608903 ARHGEF12Q9NZN5 1544 aa17.5■□□□□ 0.39
CTCFL-221ENST00000608903 HNRNPMP52272 730 aaKnown RBP eCLIP17.5■□□□□ 0.39
CTCFL-221ENST00000608903 EFCAB2Q5VUJ9 269 aa17.49■□□□□ 0.39
CTCFL-221ENST00000608903 MBD5Q9P267 1494 aa17.49■□□□□ 0.39
CTCFL-221ENST00000608903 KIF13AQ9H1H9 1805 aa17.48■□□□□ 0.39
CTCFL-221ENST00000608903 DNMT1P26358 1616 aaKnown RBP17.48■□□□□ 0.39
CTCFL-221ENST00000608903 DAPK1P53355 1430 aa17.47■□□□□ 0.39
CTCFL-221ENST00000608903 FANCAO15360 1455 aa17.47■□□□□ 0.39
CTCFL-221ENST00000608903 HRCP23327 699 aa17.46■□□□□ 0.39
CTCFL-221ENST00000608903 SYCP2Q9BX26 1530 aa17.45■□□□□ 0.38
CTCFL-221ENST00000608903 CHIC2Q9UKJ5 165 aa17.45■□□□□ 0.38
CTCFL-221ENST00000608903 ABCC1P33527 1531 aa17.44■□□□□ 0.38
CTCFL-221ENST00000608903 KIAA1107Q9UPP5 1409 aa17.44■□□□□ 0.38
CTCFL-221ENST00000608903 PPRC1Q5VV67 1664 aaKnown RBP17.43■□□□□ 0.38
CTCFL-221ENST00000608903 ARHGEF5Q12774 1597 aa17.43■□□□□ 0.38
CTCFL-221ENST00000608903 AKNAQ7Z591 1439 aa17.42■□□□□ 0.38
CTCFL-221ENST00000608903 TRAPPC8Q9Y2L5 1435 aa17.42■□□□□ 0.38
CTCFL-221ENST00000608903 TSPOAP1O95153 1857 aa17.41■□□□□ 0.38
CTCFL-221ENST00000608903 CROCC2H7BZ55 1655 aa17.41■□□□□ 0.38
CTCFL-221ENST00000608903 PLEKHH2Q8IVE3 1493 aa17.4■□□□□ 0.38
CTCFL-221ENST00000608903 AEBP2Q6ZN18 517 aaPredicted RBP17.39■□□□□ 0.37
CTCFL-221ENST00000608903 RRP7BPQ9NSQ0 103 aa17.39■□□□□ 0.37
CTCFL-221ENST00000608903 ADGRL1O94910 1474 aa17.38■□□□□ 0.37
CTCFL-221ENST00000608903 SCAPERQ9BY12 1400 aa17.38■□□□□ 0.37
CTCFL-221ENST00000608903 CCDC141Q6ZP82 1450 aa17.38■□□□□ 0.37
CTCFL-221ENST00000608903 AFAP1Q8N556 730 aa17.38■□□□□ 0.37
CTCFL-221ENST00000608903 NEO1Q92859 1461 aa17.36■□□□□ 0.37
CTCFL-221ENST00000608903 NAIPQ13075 1403 aa17.36■□□□□ 0.37
CTCFL-221ENST00000608903 C9orf84Q5VXU9 1444 aa17.36■□□□□ 0.37
CTCFL-221ENST00000608903 RSPH4AQ5TD94 716 aa17.35■□□□□ 0.37
CTCFL-221ENST00000608903 SHANK2Q9UPX8 1470 aa17.35■□□□□ 0.37
CTCFL-221ENST00000608903 HFM1A2PYH4 1435 aa17.35■□□□□ 0.37
CTCFL-221ENST00000608903 NCOA1Q15788 1441 aa17.35■□□□□ 0.37
CTCFL-221ENST00000608903 SETD5Q9C0A6 1442 aa17.35■□□□□ 0.37
CTCFL-221ENST00000608903 CFAP74Q9C0B2 1584 aa17.34■□□□□ 0.37
CTCFL-221ENST00000608903 ROCK1Q13464 1354 aa17.34■□□□□ 0.37
CTCFL-221ENST00000608903 ADGRL2O95490 1459 aa17.34■□□□□ 0.37
CTCFL-221ENST00000608903 RAB3GAP2Q9H2M9 1393 aa17.33■□□□□ 0.36
CTCFL-221ENST00000608903 KDM6BO15054 1643 aa17.33■□□□□ 0.36
CTCFL-221ENST00000608903 TSPY4P0CV99 314 aa17.32■□□□□ 0.36
CTCFL-221ENST00000608903 TSPY10P0CW01 314 aa17.32■□□□□ 0.36
CTCFL-221ENST00000608903 MAST1Q9Y2H9 1570 aa17.32■□□□□ 0.36
CTCFL-221ENST00000608903 ADGBQ8N7X0 1667 aa17.32■□□□□ 0.36
CTCFL-221ENST00000608903 RAPGEF3O95398 923 aa17.3■□□□□ 0.36
CTCFL-221ENST00000608903 TRHP20396 242 aaPredicted RBP17.3■□□□□ 0.36
CTCFL-221ENST00000608903 GCC2Q8IWJ2 1684 aa17.3■□□□□ 0.36
CTCFL-221ENST00000608903 POGZQ7Z3K3 1410 aa17.29■□□□□ 0.36
CTCFL-221ENST00000608903 COL17A1Q9UMD9 1497 aaPredicted RBP17.29■□□□□ 0.36
CTCFL-221ENST00000608903 TEX14Q8IWB6 1497 aa17.28■□□□□ 0.36
CTCFL-221ENST00000608903 ANKRD30AQ9BXX3 1397 aa17.28■□□□□ 0.36
CTCFL-221ENST00000608903 DENND4BO75064 1496 aaPredicted RBP17.27■□□□□ 0.36
CTCFL-221ENST00000608903 SPAG9O60271 1321 aaKnown RBP17.27■□□□□ 0.36
CTCFL-221ENST00000608903 FRMPD1Q5SYB0 1578 aa17.27■□□□□ 0.35
CTCFL-221ENST00000608903 ZFYVE16Q7Z3T8 1539 aa17.27■□□□□ 0.35
CTCFL-221ENST00000608903 RICTORQ6R327 1708 aa17.26■□□□□ 0.35
CTCFL-221ENST00000608903 KDM5CP41229 1560 aa17.26■□□□□ 0.35
CTCFL-221ENST00000608903 INO80Q9ULG1 1556 aaPredicted RBP17.26■□□□□ 0.35
CTCFL-221ENST00000608903 ZNF518AQ6AHZ1 1483 aa17.26■□□□□ 0.35
CTCFL-221ENST00000608903 RTEL1-TNFRSF6BF6WH68 1400 aa17.25■□□□□ 0.35
CTCFL-221ENST00000608903 KIF15Q9NS87 1388 aa17.25■□□□□ 0.35
CTCFL-221ENST00000608903 KIDINS220Q9ULH0 1771 aa17.24■□□□□ 0.35
CTCFL-221ENST00000608903 PLXNC1O60486 1568 aa17.24■□□□□ 0.35
CTCFL-221ENST00000608903 ATP7AQ04656 1500 aa17.23■□□□□ 0.35
CTCFL-221ENST00000608903 MLH3Q9UHC1 1453 aa17.21■□□□□ 0.35
CTCFL-221ENST00000608903 ANKRD50Q9ULJ7 1429 aa17.21■□□□□ 0.34
CTCFL-221ENST00000608903 DHX57Q6P158 1386 aaKnown RBP17.2■□□□□ 0.34
CTCFL-221ENST00000608903 HECW2Q9P2P5 1572 aa17.18■□□□□ 0.34
CTCFL-221ENST00000608903 YEATS2Q9ULM3 1422 aa17.17■□□□□ 0.34
CTCFL-221ENST00000608903 MYT1LQ9UL68 1186 aa17.17■□□□□ 0.34
CTCFL-221ENST00000608903 DUOX2Q9NRD8 1548 aa17.17■□□□□ 0.34
CTCFL-221ENST00000608903 ABCA6Q8N139 1617 aa17.16■□□□□ 0.34
CTCFL-221ENST00000608903 ZMYM4Q5VZL5 1548 aa17.16■□□□□ 0.34
CTCFL-221ENST00000608903 CCER1Q8TC90 406 aaPredicted RBP17.15■□□□□ 0.34
CTCFL-221ENST00000608903 DIP2CQ9Y2E4 1556 aa17.14■□□□□ 0.33
CTCFL-221ENST00000608903 DHX29Q7Z478 1369 aaKnown RBP17.13■□□□□ 0.33
CTCFL-221ENST00000608903 TRIM52Q96A61 297 aa17.12■□□□□ 0.33
CTCFL-221ENST00000608903 ERBINQ96RT1 1412 aa17.12■□□□□ 0.33
CTCFL-221ENST00000608903 A2MP01023 1474 aa17.1■□□□□ 0.33
CTCFL-221ENST00000608903 PZPP20742 1482 aa17.1■□□□□ 0.33
CTCFL-221ENST00000608903 MAGI2Q86UL8 1455 aa17.08■□□□□ 0.33
CTCFL-221ENST00000608903 MPHOSPH9Q99550 1183 aa17.08■□□□□ 0.32
CTCFL-221ENST00000608903 UNC13BO14795 1591 aa17.07■□□□□ 0.32
CTCFL-221ENST00000608903 SIGLEC1Q9BZZ2 1709 aa17.07■□□□□ 0.32
CTCFL-221ENST00000608903 KIF3BO15066 747 aa17.06■□□□□ 0.32
CTCFL-221ENST00000608903 NUP155O75694 1391 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms