RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 PREX2Q70Z35 1606 aa17.06■□□□□ 0.32
CTCFL-214ENST00000608108 TRIM26Q12899 539 aaPredicted RBP17.05■□□□□ 0.32
CTCFL-214ENST00000608108 CDC42BPBQ9Y5S2 1711 aa17.04■□□□□ 0.32
CTCFL-214ENST00000608108 DIP2BQ9P265 1576 aa17.04■□□□□ 0.32
CTCFL-214ENST00000608108 PTPN23Q9H3S7 1636 aa17.03■□□□□ 0.32
CTCFL-214ENST00000608108 MIA2Q96PC5 1412 aa17.02■□□□□ 0.32
CTCFL-214ENST00000608108 GLI2P10070 1586 aa17■□□□□ 0.31
CTCFL-214ENST00000608108 ARHGAP5Q13017 1502 aa17■□□□□ 0.31
CTCFL-214ENST00000608108 CFDP1Q9UEE9 299 aaPredicted RBP16.99■□□□□ 0.31
CTCFL-214ENST00000608108 PLCH2O75038 1416 aa16.98■□□□□ 0.31
CTCFL-214ENST00000608108 KIF13AQ9H1H9 1805 aa16.98■□□□□ 0.31
CTCFL-214ENST00000608108 MAP3K4Q9Y6R4 1608 aa16.98■□□□□ 0.31
CTCFL-214ENST00000608108 ARAP3Q8WWN8 1544 aa16.98■□□□□ 0.31
CTCFL-214ENST00000608108 TCOF1Q13428 1488 aaKnown RBP16.98■□□□□ 0.31
CTCFL-214ENST00000608108 CAMSAP2Q08AD1 1489 aa16.97■□□□□ 0.31
CTCFL-214ENST00000608108 FAM50AQ14320 339 aaKnown RBP16.96■□□□□ 0.31
CTCFL-214ENST00000608108 CD109Q6YHK3 1445 aa16.95■□□□□ 0.3
CTCFL-214ENST00000608108 FAM69CQ0P6D2 419 aa16.95■□□□□ 0.3
CTCFL-214ENST00000608108 ZNF777Q9ULD5 760 aaPredicted RBP16.95■□□□□ 0.3
CTCFL-214ENST00000608108 SAMD9LQ8IVG5 1584 aa16.95■□□□□ 0.3
CTCFL-214ENST00000608108 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.94■□□□□ 0.3
CTCFL-214ENST00000608108 PCGF6Q9BYE7 350 aa16.94■□□□□ 0.3
CTCFL-214ENST00000608108 ZNF644Q9H582 1327 aaPredicted RBP16.93■□□□□ 0.3
CTCFL-214ENST00000608108 FANCAO15360 1455 aa16.92■□□□□ 0.3
CTCFL-214ENST00000608108 TSPOAP1O95153 1857 aa16.92■□□□□ 0.3
CTCFL-214ENST00000608108 CFAP74Q9C0B2 1584 aa16.91■□□□□ 0.3
CTCFL-214ENST00000608108 EFCAB2Q5VUJ9 269 aa16.9■□□□□ 0.3
CTCFL-214ENST00000608108 DNMT1P26358 1616 aaKnown RBP16.89■□□□□ 0.29
CTCFL-214ENST00000608108 ABCC1P33527 1531 aa16.89■□□□□ 0.29
CTCFL-214ENST00000608108 SYCP2Q9BX26 1530 aa16.89■□□□□ 0.29
CTCFL-214ENST00000608108 PLEKHH2Q8IVE3 1493 aa16.88■□□□□ 0.29
CTCFL-214ENST00000608108 PPRC1Q5VV67 1664 aaKnown RBP16.88■□□□□ 0.29
CTCFL-214ENST00000608108 ITGAEP38570 1179 aa16.88■□□□□ 0.29
CTCFL-214ENST00000608108 CROCC2H7BZ55 1655 aa16.87■□□□□ 0.29
CTCFL-214ENST00000608108 ARHGEF5Q12774 1597 aa16.86■□□□□ 0.29
CTCFL-214ENST00000608108 DAPK1P53355 1430 aa16.85■□□□□ 0.29
CTCFL-214ENST00000608108 KIAA1107Q9UPP5 1409 aa16.85■□□□□ 0.29
CTCFL-214ENST00000608108 ADGRL1O94910 1474 aa16.85■□□□□ 0.29
CTCFL-214ENST00000608108 NEO1Q92859 1461 aa16.85■□□□□ 0.29
CTCFL-214ENST00000608108 AKNAQ7Z591 1439 aa16.84■□□□□ 0.29
CTCFL-214ENST00000608108 MBD5Q9P267 1494 aa16.84■□□□□ 0.29
CTCFL-214ENST00000608108 TEX14Q8IWB6 1497 aa16.83■□□□□ 0.29
CTCFL-214ENST00000608108 ARHGEF12Q9NZN5 1544 aa16.83■□□□□ 0.29
CTCFL-214ENST00000608108 ABCC5O15440 1437 aa16.83■□□□□ 0.28
CTCFL-214ENST00000608108 HNRNPMP52272 730 aaKnown RBP eCLIP16.82■□□□□ 0.28
CTCFL-214ENST00000608108 PTPRKQ15262 1439 aa16.82■□□□□ 0.28
CTCFL-214ENST00000608108 CCDC141Q6ZP82 1450 aa16.82■□□□□ 0.28
CTCFL-214ENST00000608108 TRHP20396 242 aaPredicted RBP16.81■□□□□ 0.28
CTCFL-214ENST00000608108 SHANK2Q9UPX8 1470 aa16.8■□□□□ 0.28
CTCFL-214ENST00000608108 SCAPERQ9BY12 1400 aa16.8■□□□□ 0.28
CTCFL-214ENST00000608108 ADGBQ8N7X0 1667 aa16.79■□□□□ 0.28
CTCFL-214ENST00000608108 RSPH4AQ5TD94 716 aa16.78■□□□□ 0.28
CTCFL-214ENST00000608108 TRAPPC8Q9Y2L5 1435 aa16.78■□□□□ 0.28
CTCFL-214ENST00000608108 C9orf84Q5VXU9 1444 aa16.77■□□□□ 0.28
CTCFL-214ENST00000608108 CHIC2Q9UKJ5 165 aa16.76■□□□□ 0.27
CTCFL-214ENST00000608108 POGZQ7Z3K3 1410 aa16.76■□□□□ 0.27
CTCFL-214ENST00000608108 ZNF518AQ6AHZ1 1483 aa16.75■□□□□ 0.27
CTCFL-214ENST00000608108 MAST1Q9Y2H9 1570 aa16.75■□□□□ 0.27
CTCFL-214ENST00000608108 TSPY4P0CV99 314 aa16.74■□□□□ 0.27
CTCFL-214ENST00000608108 TSPY10P0CW01 314 aa16.74■□□□□ 0.27
CTCFL-214ENST00000608108 RICTORQ6R327 1708 aa16.74■□□□□ 0.27
CTCFL-214ENST00000608108 DENND4BO75064 1496 aaPredicted RBP16.74■□□□□ 0.27
CTCFL-214ENST00000608108 ADGRL2O95490 1459 aa16.73■□□□□ 0.27
CTCFL-214ENST00000608108 GCC2Q8IWJ2 1684 aa16.73■□□□□ 0.27
CTCFL-214ENST00000608108 ROCK1Q13464 1354 aa16.73■□□□□ 0.27
CTCFL-214ENST00000608108 KDM5CP41229 1560 aa16.72■□□□□ 0.27
CTCFL-214ENST00000608108 HFM1A2PYH4 1435 aa16.72■□□□□ 0.27
CTCFL-214ENST00000608108 AFAP1Q8N556 730 aa16.72■□□□□ 0.27
CTCFL-214ENST00000608108 ZFYVE16Q7Z3T8 1539 aa16.71■□□□□ 0.27
CTCFL-214ENST00000608108 INO80Q9ULG1 1556 aaPredicted RBP16.71■□□□□ 0.27
CTCFL-214ENST00000608108 PLXNC1O60486 1568 aa16.7■□□□□ 0.26
CTCFL-214ENST00000608108 ANKRD30AQ9BXX3 1397 aa16.7■□□□□ 0.26
CTCFL-214ENST00000608108 ATP7AQ04656 1500 aa16.7■□□□□ 0.26
CTCFL-214ENST00000608108 NCOA1Q15788 1441 aa16.7■□□□□ 0.26
CTCFL-214ENST00000608108 FRMPD1Q5SYB0 1578 aa16.7■□□□□ 0.26
CTCFL-214ENST00000608108 RRP7BPQ9NSQ0 103 aa16.7■□□□□ 0.26
CTCFL-214ENST00000608108 SPAG9O60271 1321 aaKnown RBP16.69■□□□□ 0.26
CTCFL-214ENST00000608108 HECW2Q9P2P5 1572 aa16.69■□□□□ 0.26
CTCFL-214ENST00000608108 NAIPQ13075 1403 aa16.69■□□□□ 0.26
CTCFL-214ENST00000608108 RAPGEF3O95398 923 aa16.68■□□□□ 0.26
CTCFL-214ENST00000608108 RTEL1-TNFRSF6BF6WH68 1400 aa16.68■□□□□ 0.26
CTCFL-214ENST00000608108 SETD5Q9C0A6 1442 aa16.67■□□□□ 0.26
CTCFL-214ENST00000608108 KIDINS220Q9ULH0 1771 aa16.67■□□□□ 0.26
CTCFL-214ENST00000608108 KIF15Q9NS87 1388 aa16.66■□□□□ 0.26
CTCFL-214ENST00000608108 ZMYM4Q5VZL5 1548 aa16.66■□□□□ 0.26
CTCFL-214ENST00000608108 MLH3Q9UHC1 1453 aa16.65■□□□□ 0.26
CTCFL-214ENST00000608108 COL17A1Q9UMD9 1497 aaPredicted RBP16.65■□□□□ 0.26
CTCFL-214ENST00000608108 RAB3GAP2Q9H2M9 1393 aa16.65■□□□□ 0.26
CTCFL-214ENST00000608108 MYT1LQ9UL68 1186 aa16.64■□□□□ 0.25
CTCFL-214ENST00000608108 KDM6BO15054 1643 aa16.62■□□□□ 0.25
CTCFL-214ENST00000608108 DUOX2Q9NRD8 1548 aa16.62■□□□□ 0.25
CTCFL-214ENST00000608108 ABCA6Q8N139 1617 aa16.62■□□□□ 0.25
CTCFL-214ENST00000608108 ANKRD50Q9ULJ7 1429 aa16.6■□□□□ 0.25
CTCFL-214ENST00000608108 DIP2CQ9Y2E4 1556 aa16.59■□□□□ 0.25
CTCFL-214ENST00000608108 MAGI2Q86UL8 1455 aa16.59■□□□□ 0.25
CTCFL-214ENST00000608108 ERBINQ96RT1 1412 aa16.57■□□□□ 0.24
CTCFL-214ENST00000608108 YEATS2Q9ULM3 1422 aa16.57■□□□□ 0.24
CTCFL-214ENST00000608108 ARHGEF40Q8TER5 1519 aa16.56■□□□□ 0.24
CTCFL-214ENST00000608108 A2MP01023 1474 aa16.55■□□□□ 0.24
CTCFL-214ENST00000608108 HRCP23327 699 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms