RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 CHIC2Q9UKJ5 165 aa31.98■■■□□ 2.71
USP6NL-204ENST00000606752 NPM1P06748 294 aaKnown RBP eCLIP31.97■■■□□ 2.71
USP6NL-204ENST00000606752 DNMT1P26358 1616 aaKnown RBP31.97■■■□□ 2.71
USP6NL-204ENST00000606752 NAIPQ13075 1403 aa31.95■■■□□ 2.7
USP6NL-204ENST00000606752 CLSPNQ9HAW4 1339 aa31.95■■■□□ 2.7
USP6NL-204ENST00000606752 AKNAQ7Z591 1439 aa31.94■■■□□ 2.7
USP6NL-204ENST00000606752 WDR7Q9Y4E6 1490 aa31.94■■■□□ 2.7
USP6NL-204ENST00000606752 TTC37Q6PGP7 1564 aa31.94■■■□□ 2.7
USP6NL-204ENST00000606752 PREX2Q70Z35 1606 aa31.91■■■□□ 2.7
USP6NL-204ENST00000606752 RRP7BPQ9NSQ0 103 aa31.91■■■□□ 2.7
USP6NL-204ENST00000606752 ROCK1Q13464 1354 aa31.91■■■□□ 2.7
USP6NL-204ENST00000606752 ASXL2Q76L83 1435 aa31.88■■■□□ 2.69
USP6NL-204ENST00000606752 CDC42BPBQ9Y5S2 1711 aa31.88■■■□□ 2.69
USP6NL-204ENST00000606752 PLCH2O75038 1416 aa31.85■■■□□ 2.69
USP6NL-204ENST00000606752 ARHGAP5Q13017 1502 aa31.84■■■□□ 2.69
USP6NL-204ENST00000606752 MYO5CQ9NQX4 1742 aa31.82■■■□□ 2.69
USP6NL-204ENST00000606752 RIMBP3CA6NJZ7 1639 aa31.81■■■□□ 2.68
USP6NL-204ENST00000606752 RIMBP3BA6NNM3 1639 aa31.81■■■□□ 2.68
USP6NL-204ENST00000606752 RIMBP3Q9UFD9 1639 aa31.81■■■□□ 2.68
USP6NL-204ENST00000606752 CYB5RLQ6IPT4 315 aa31.81■■■□□ 2.68
USP6NL-204ENST00000606752 HNRNPMP52272 730 aaKnown RBP eCLIP31.8■■■□□ 2.683e-7■■■■■ 27.8
USP6NL-204ENST00000606752 RSPH4AQ5TD94 716 aa31.8■■■□□ 2.68
USP6NL-204ENST00000606752 SAMD9LQ8IVG5 1584 aa31.8■■■□□ 2.68
USP6NL-204ENST00000606752 MBD5Q9P267 1494 aa31.79■■■□□ 2.68
USP6NL-204ENST00000606752 EFCAB2Q5VUJ9 269 aa31.79■■■□□ 2.68
USP6NL-204ENST00000606752 GCC2Q8IWJ2 1684 aa31.77■■■□□ 2.68
USP6NL-204ENST00000606752 ARHGEF5Q12774 1597 aa31.76■■■□□ 2.68
USP6NL-204ENST00000606752 TSPY4P0CV99 314 aa31.76■■■□□ 2.67
USP6NL-204ENST00000606752 TSPY10P0CW01 314 aa31.76■■■□□ 2.67
USP6NL-204ENST00000606752 NCOA1Q15788 1441 aa31.75■■■□□ 2.67
USP6NL-204ENST00000606752 PLEKHH2Q8IVE3 1493 aa31.75■■■□□ 2.67
USP6NL-204ENST00000606752 ADGRL2O95490 1459 aa31.75■■■□□ 2.67
USP6NL-204ENST00000606752 SHANK2Q9UPX8 1470 aa31.75■■■□□ 2.67
USP6NL-204ENST00000606752 KIAA1107Q9UPP5 1409 aa31.74■■■□□ 2.67
USP6NL-204ENST00000606752 CROCC2H7BZ55 1655 aa31.74■■■□□ 2.67
USP6NL-204ENST00000606752 ARAP3Q8WWN8 1544 aa31.73■■■□□ 2.67
USP6NL-204ENST00000606752 ANKRD30AQ9BXX3 1397 aa31.72■■■□□ 2.67
USP6NL-204ENST00000606752 ABCA9Q8IUA7 1624 aa31.71■■■□□ 2.67
USP6NL-204ENST00000606752 ACIN1Q9UKV3 1341 aaKnown RBP31.71■■■□□ 2.67
USP6NL-204ENST00000606752 CCDC141Q6ZP82 1450 aa31.7■■■□□ 2.67
USP6NL-204ENST00000606752 C9orf84Q5VXU9 1444 aa31.7■■■□□ 2.66
USP6NL-204ENST00000606752 ADGBQ8N7X0 1667 aa31.67■■■□□ 2.66
USP6NL-204ENST00000606752 MAPKBP1O60336 1514 aa31.67■■■□□ 2.66
USP6NL-204ENST00000606752 SYCP2Q9BX26 1530 aa31.67■■■□□ 2.66
USP6NL-204ENST00000606752 KDM6BO15054 1643 aa31.64■■■□□ 2.66
USP6NL-204ENST00000606752 ARHGEF12Q9NZN5 1544 aa31.6■■■□□ 2.65
USP6NL-204ENST00000606752 TRIM52Q96A61 297 aa31.6■■■□□ 2.65
USP6NL-204ENST00000606752 FANCAO15360 1455 aa31.58■■■□□ 2.65
USP6NL-204ENST00000606752 ABCC1P33527 1531 aa31.58■■■□□ 2.65
USP6NL-204ENST00000606752 ANKRD50Q9ULJ7 1429 aa31.54■■■□□ 2.64
USP6NL-204ENST00000606752 MAST1Q9Y2H9 1570 aa31.54■■■□□ 2.64
USP6NL-204ENST00000606752 CD109Q6YHK3 1445 aa31.53■■■□□ 2.64
USP6NL-204ENST00000606752 KIF15Q9NS87 1388 aa31.52■■■□□ 2.64
USP6NL-204ENST00000606752 TRAPPC8Q9Y2L5 1435 aa31.5■■■□□ 2.63
USP6NL-204ENST00000606752 MPHOSPH9Q99550 1183 aa31.49■■■□□ 2.63
USP6NL-204ENST00000606752 SIN3AQ96ST3 1273 aa31.44■■■□□ 2.62
USP6NL-204ENST00000606752 ADGRL1O94910 1474 aa31.43■■■□□ 2.62
USP6NL-204ENST00000606752 AFAP1Q8N556 730 aa31.43■■■□□ 2.62
USP6NL-204ENST00000606752 SCAPERQ9BY12 1400 aa31.42■■■□□ 2.62
USP6NL-204ENST00000606752 DENND4BO75064 1496 aaPredicted RBP31.41■■■□□ 2.62
USP6NL-204ENST00000606752 SPAG9O60271 1321 aaKnown RBP31.4■■■□□ 2.62
USP6NL-204ENST00000606752 PLXNC1O60486 1568 aa31.4■■■□□ 2.62
USP6NL-204ENST00000606752 RTEL1-TNFRSF6BF6WH68 1400 aa31.4■■■□□ 2.62
USP6NL-204ENST00000606752 NEUROD1Q13562 356 aa31.39■■■□□ 2.62
USP6NL-204ENST00000606752 TIMELESSQ9UNS1 1208 aa31.38■■■□□ 2.61
USP6NL-204ENST00000606752 SLC4A1APQ9BWU0 796 aaKnown RBP31.38■■■□□ 2.61
USP6NL-204ENST00000606752 GLI2P10070 1586 aa31.36■■■□□ 2.61
USP6NL-204ENST00000606752 CFAP74Q9C0B2 1584 aa31.35■■■□□ 2.61
USP6NL-204ENST00000606752 PZPP20742 1482 aa31.33■■■□□ 2.61
USP6NL-204ENST00000606752 DUOX2Q9NRD8 1548 aa31.33■■■□□ 2.61
USP6NL-204ENST00000606752 NUP155O75694 1391 aa31.31■■■□□ 2.6
USP6NL-204ENST00000606752 NEO1Q92859 1461 aa31.31■■■□□ 2.6
USP6NL-204ENST00000606752 FAM69CQ0P6D2 419 aa31.3■■■□□ 2.6
USP6NL-204ENST00000606752 MAP3K4Q9Y6R4 1608 aa31.29■■■□□ 2.6
USP6NL-204ENST00000606752 ZFYVE16Q7Z3T8 1539 aa31.28■■■□□ 2.6
USP6NL-204ENST00000606752 ERBINQ96RT1 1412 aa31.27■■■□□ 2.6
USP6NL-204ENST00000606752 ZNF518AQ6AHZ1 1483 aa31.26■■■□□ 2.6
USP6NL-204ENST00000606752 FOXD1Q16676 465 aa31.26■■■□□ 2.59
USP6NL-204ENST00000606752 KDM5DQ9BY66 1539 aa31.26■■■□□ 2.59
USP6NL-204ENST00000606752 DIP2BQ9P265 1576 aa31.24■■■□□ 2.59
USP6NL-204ENST00000606752 ANKRD30BQ9BXX2 1392 aa31.24■■■□□ 2.59
USP6NL-204ENST00000606752 ATP7AQ04656 1500 aa31.23■■■□□ 2.59
USP6NL-204ENST00000606752 INO80Q9ULG1 1556 aaPredicted RBP31.22■■■□□ 2.59
USP6NL-204ENST00000606752 POGZQ7Z3K3 1410 aa31.21■■■□□ 2.59
USP6NL-204ENST00000606752 MYT1LQ9UL68 1186 aa31.21■■■□□ 2.59
USP6NL-204ENST00000606752 PKD2Q13563 968 aa31.2■■■□□ 2.59
USP6NL-204ENST00000606752 TONSLQ96HA7 1378 aa31.19■■■□□ 2.58
USP6NL-204ENST00000606752 UNC13BO14795 1591 aa31.15■■■□□ 2.58
USP6NL-204ENST00000606752 KDM5CP41229 1560 aa31.15■■■□□ 2.58
USP6NL-204ENST00000606752 PPP1R15AO75807 674 aaPredicted RBP31.13■■■□□ 2.57
USP6NL-204ENST00000606752 MLH3Q9UHC1 1453 aa31.13■■■□□ 2.57
USP6NL-204ENST00000606752 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.12■■■□□ 2.57
USP6NL-204ENST00000606752 FAM135AQ9P2D6 1515 aa31.12■■■□□ 2.57
USP6NL-204ENST00000606752 DHX29Q7Z478 1369 aaKnown RBP31.11■■■□□ 2.57
USP6NL-204ENST00000606752 ZNF316A6NFI3 1004 aaPredicted RBP31.1■■■□□ 2.57
USP6NL-204ENST00000606752 KIDINS220Q9ULH0 1771 aa31.1■■■□□ 2.57
USP6NL-204ENST00000606752 RAPGEF3O95398 923 aa31.1■■■□□ 2.57
USP6NL-204ENST00000606752 MAGI2Q86UL8 1455 aa31.09■■■□□ 2.57
USP6NL-204ENST00000606752 RPRD2Q5VT52 1461 aaKnown RBP31.07■■■□□ 2.56
USP6NL-204ENST00000606752 TEX14Q8IWB6 1497 aa31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms