RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 SIGLEC1Q9BZZ2 1709 aa30.71■■■□□ 2.51
SRSF4-206ENST00000605204 PLCH2O75038 1416 aa30.71■■■□□ 2.51
SRSF4-206ENST00000605204 ZMYM4Q5VZL5 1548 aa30.68■■■□□ 2.5
SRSF4-206ENST00000605204 DENND4BO75064 1496 aaPredicted RBP30.66■■■□□ 2.5
SRSF4-206ENST00000605204 AKNAQ7Z591 1439 aa30.65■■■□□ 2.5
SRSF4-206ENST00000605204 RIMS1Q86UR5 1692 aaKnown RBP30.65■■■□□ 2.5
SRSF4-206ENST00000605204 MYO5CQ9NQX4 1742 aa30.61■■■□□ 2.49
SRSF4-206ENST00000605204 EFCAB2Q5VUJ9 269 aa30.6■■■□□ 2.49
SRSF4-206ENST00000605204 VPS8Q8N3P4 1428 aa30.6■■■□□ 2.49
SRSF4-206ENST00000605204 ZFYVE16Q7Z3T8 1539 aa30.58■■■□□ 2.49
SRSF4-206ENST00000605204 YEATS2Q9ULM3 1422 aa30.56■■■□□ 2.48
SRSF4-206ENST00000605204 MTUS2Q5JR59 1369 aa30.56■■■□□ 2.48
SRSF4-206ENST00000605204 LMTK3Q96Q04 1460 aa30.54■■■□□ 2.48
SRSF4-206ENST00000605204 ARHGAP5Q13017 1502 aa30.54■■■□□ 2.48
SRSF4-206ENST00000605204 ARID4BQ4LE39 1312 aaPredicted RBP30.52■■■□□ 2.48
SRSF4-206ENST00000605204 POGZQ7Z3K3 1410 aa30.51■■■□□ 2.47
SRSF4-206ENST00000605204 EHBP1L1Q8N3D4 1523 aa30.51■■■□□ 2.47
SRSF4-206ENST00000605204 PREX2Q70Z35 1606 aa30.49■■■□□ 2.47
SRSF4-206ENST00000605204 SCAPERQ9BY12 1400 aa30.48■■■□□ 2.47
SRSF4-206ENST00000605204 MAGI2Q86UL8 1455 aa30.46■■■□□ 2.47
SRSF4-206ENST00000605204 FER1L4A9Z1Z3 1794 aa30.45■■■□□ 2.47
SRSF4-206ENST00000605204 ZNF518AQ6AHZ1 1483 aa30.41■■■□□ 2.46
SRSF4-206ENST00000605204 TIAM1Q13009 1591 aa30.41■■■□□ 2.46
SRSF4-206ENST00000605204 MAP3K1Q13233 1512 aa30.41■■■□□ 2.46
SRSF4-206ENST00000605204 GPATCH8Q9UKJ3 1502 aaKnown RBP30.4■■■□□ 2.46
SRSF4-206ENST00000605204 CDC42BPBQ9Y5S2 1711 aa30.4■■■□□ 2.46
SRSF4-206ENST00000605204 CCNB3Q8WWL7 1395 aa30.4■■■□□ 2.46
SRSF4-206ENST00000605204 CDC42BPAQ5VT25 1732 aa30.37■■■□□ 2.45
SRSF4-206ENST00000605204 ABCC1P33527 1531 aa30.36■■■□□ 2.45
SRSF4-206ENST00000605204 KDM5CP41229 1560 aa30.34■■■□□ 2.45
SRSF4-206ENST00000605204 ARHGEF12Q9NZN5 1544 aa30.33■■■□□ 2.45
SRSF4-206ENST00000605204 PLEKHH2Q8IVE3 1493 aa30.32■■■□□ 2.44
SRSF4-206ENST00000605204 CFDP1Q9UEE9 299 aaPredicted RBP30.3■■■□□ 2.44
SRSF4-206ENST00000605204 C9orf84Q5VXU9 1444 aa30.3■■■□□ 2.44
SRSF4-206ENST00000605204 LRRC9Q6ZRR7 1453 aa30.3■■■□□ 2.44
SRSF4-206ENST00000605204 SUPT6HQ7KZ85 1726 aaKnown RBP30.29■■■□□ 2.44
SRSF4-206ENST00000605204 ITSN2Q9NZM3 1697 aa30.28■■■□□ 2.44
SRSF4-206ENST00000605204 KIAA1107Q9UPP5 1409 aa30.27■■■□□ 2.44
SRSF4-206ENST00000605204 ATP10AO60312 1499 aa30.27■■■□□ 2.44
SRSF4-206ENST00000605204 NCOA2Q15596 1464 aa30.27■■■□□ 2.44
SRSF4-206ENST00000605204 DIP2CQ9Y2E4 1556 aa30.27■■■□□ 2.44
SRSF4-206ENST00000605204 ABCA6Q8N139 1617 aa30.26■■■□□ 2.43
SRSF4-206ENST00000605204 PLPPR3Q6T4P5 718 aa30.26■■■□□ 2.43
SRSF4-206ENST00000605204 SAMD9LQ8IVG5 1584 aa30.24■■■□□ 2.43
SRSF4-206ENST00000605204 MLH3Q9UHC1 1453 aa30.24■■■□□ 2.43
SRSF4-206ENST00000605204 APLP2Q06481 763 aa30.24■■■□□ 2.43
SRSF4-206ENST00000605204 MLECQ14165 292 aa30.24■■■□□ 2.43
SRSF4-206ENST00000605204 HSPA2P54652 639 aa30.23■■■□□ 2.43
SRSF4-206ENST00000605204 AFAP1Q8N556 730 aa30.23■■■□□ 2.43
SRSF4-206ENST00000605204 ZNF777Q9ULD5 760 aaPredicted RBP30.23■■■□□ 2.43
SRSF4-206ENST00000605204 TRAPPC8Q9Y2L5 1435 aa30.21■■■□□ 2.43
SRSF4-206ENST00000605204 PREX1Q8TCU6 1659 aa30.2■■■□□ 2.42
SRSF4-206ENST00000605204 FBXO41Q8TF61 875 aa30.19■■■□□ 2.42
SRSF4-206ENST00000605204 SYCP2Q9BX26 1530 aa30.19■■■□□ 2.42
SRSF4-206ENST00000605204 REREQ9P2R6 1566 aa30.18■■■□□ 2.42
SRSF4-206ENST00000605204 MYT1LQ9UL68 1186 aa30.13■■■□□ 2.41
SRSF4-206ENST00000605204 KANK4Q5T7N3 995 aaPredicted RBP30.11■■■□□ 2.41
SRSF4-206ENST00000605204 HNRNPMP52272 730 aaKnown RBP eCLIP30.09■■■□□ 2.413e-9■■■■□ 23.4
SRSF4-206ENST00000605204 SPAG9O60271 1321 aaKnown RBP30.09■■■□□ 2.41
SRSF4-206ENST00000605204 KIDINS220Q9ULH0 1771 aa30.08■■■□□ 2.41
SRSF4-206ENST00000605204 RSPH4AQ5TD94 716 aa30.06■■■□□ 2.4
SRSF4-206ENST00000605204 C3P01024 1663 aa30.06■■■□□ 2.4
SRSF4-206ENST00000605204 MBD5Q9P267 1494 aa30.06■■■□□ 2.4
SRSF4-206ENST00000605204 MIA2Q96PC5 1412 aa30.05■■■□□ 2.4
SRSF4-206ENST00000605204 CAMSAP2Q08AD1 1489 aa30.05■■■□□ 2.4
SRSF4-206ENST00000605204 MYOM3Q5VTT5 1437 aa30.04■■■□□ 2.4
SRSF4-206ENST00000605204 ZNF644Q9H582 1327 aaPredicted RBP30.03■■■□□ 2.4
SRSF4-206ENST00000605204 STRCQ7RTU9 1775 aa30.03■■■□□ 2.4
SRSF4-206ENST00000605204 CEBPAP49715 358 aaPredicted RBP30.03■■■□□ 2.4
SRSF4-206ENST00000605204 AGLP35573 1532 aa30.02■■■□□ 2.4
SRSF4-206ENST00000605204 ATP7AQ04656 1500 aa30.02■■■□□ 2.4
SRSF4-206ENST00000605204 INO80Q9ULG1 1556 aaPredicted RBP30.01■■■□□ 2.39
SRSF4-206ENST00000605204 CCDC141Q6ZP82 1450 aa30■■■□□ 2.39
SRSF4-206ENST00000605204 RTEL1-TNFRSF6BF6WH68 1400 aa29.99■■■□□ 2.39
SRSF4-206ENST00000605204 ARHGEF5Q12774 1597 aa29.96■■■□□ 2.39
SRSF4-206ENST00000605204 UHRF1BP1Q6BDS2 1440 aa29.93■■■□□ 2.38
SRSF4-206ENST00000605204 A2MP01023 1474 aa29.89■■■□□ 2.38
SRSF4-206ENST00000605204 PLXNC1O60486 1568 aa29.88■■■□□ 2.37
SRSF4-206ENST00000605204 TSPY4P0CV99 314 aa29.87■■■□□ 2.37
SRSF4-206ENST00000605204 TSPY10P0CW01 314 aa29.87■■■□□ 2.37
SRSF4-206ENST00000605204 SETD1BQ9UPS6 1966 aaKnown RBP29.86■■■□□ 2.37
SRSF4-206ENST00000605204 MROH2AA6NES4 1674 aa29.85■■■□□ 2.37
SRSF4-206ENST00000605204 ADGBQ8N7X0 1667 aa29.85■■■□□ 2.37
SRSF4-206ENST00000605204 FGD6Q6ZV73 1430 aa29.83■■■□□ 2.37
SRSF4-206ENST00000605204 CERKQ8TCT0 537 aa29.83■■■□□ 2.37
SRSF4-206ENST00000605204 CNTLNQ9NXG0 1405 aa29.8■■■□□ 2.36
SRSF4-206ENST00000605204 MAST1Q9Y2H9 1570 aa29.8■■■□□ 2.36
SRSF4-206ENST00000605204 TCOF1Q13428 1488 aaKnown RBP29.79■■■□□ 2.36
SRSF4-206ENST00000605204 PTPN23Q9H3S7 1636 aa29.79■■■□□ 2.36
SRSF4-206ENST00000605204 DHX29Q7Z478 1369 aaKnown RBP29.78■■■□□ 2.36
SRSF4-206ENST00000605204 ESF1Q9H501 851 aaKnown RBP29.78■■■□□ 2.36
SRSF4-206ENST00000605204 CLTCQ00610 1675 aaKnown RBP29.78■■■□□ 2.36
SRSF4-206ENST00000605204 SHANK2Q9UPX8 1470 aa29.76■■■□□ 2.35
SRSF4-206ENST00000605204 PPP6R1Q9UPN7 881 aa29.75■■■□□ 2.35
SRSF4-206ENST00000605204 MYO3AQ8NEV4 1616 aa29.73■■■□□ 2.35
SRSF4-206ENST00000605204 NCOA1Q15788 1441 aa29.72■■■□□ 2.35
SRSF4-206ENST00000605204 ZNF142P52746 1687 aaPredicted RBP29.71■■■□□ 2.35
SRSF4-206ENST00000605204 PTPRTO14522 1441 aa29.69■■■□□ 2.34
SRSF4-206ENST00000605204 NPATQ14207 1427 aa29.69■■■□□ 2.34
SRSF4-206ENST00000605204 ABCC5O15440 1437 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms