RNA–Protein interactions for RNA: ENST00000604860.3

UBE3A-206, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-206ENST00000604860 TSHZ2Q9NRE2 1034 aa11.66□□□□□ -0.54
UBE3A-206ENST00000604860 SLAIN1Q8ND83 568 aa11.65□□□□□ -0.54
UBE3A-206ENST00000604860 NCKAP5LQ9HCH0 1330 aa11.61□□□□□ -0.55
UBE3A-206ENST00000604860 C2orf72A6NCS6 295 aa11.61□□□□□ -0.55
UBE3A-206ENST00000604860 KIF3CO14782 793 aa11.59□□□□□ -0.55
UBE3A-206ENST00000604860 CRISPLD2Q9H0B8 497 aa11.57□□□□□ -0.56
UBE3A-206ENST00000604860 HAP1P54257 671 aaPredicted RBP11.56□□□□□ -0.56
UBE3A-206ENST00000604860 TMC2Q8TDI7 906 aa11.54□□□□□ -0.56
UBE3A-206ENST00000604860 GPHNQ9NQX3 736 aaPredicted RBP11.54□□□□□ -0.56
UBE3A-206ENST00000604860 DSG2Q14126 1118 aa11.52□□□□□ -0.57
UBE3A-206ENST00000604860 LARP6Q9BRS8 491 aaKnown RBP11.51□□□□□ -0.57
UBE3A-206ENST00000604860 PDE4AP27815 886 aa11.49□□□□□ -0.57
UBE3A-206ENST00000604860 HOXB3P14651 431 aaPredicted RBP11.47□□□□□ -0.57
UBE3A-206ENST00000604860 FOXK1P85037 733 aa11.47□□□□□ -0.57
UBE3A-206ENST00000604860 MFSD10Q14728 455 aa11.47□□□□□ -0.57
UBE3A-206ENST00000604860 PLPP6Q8IY26 295 aa11.47□□□□□ -0.57
UBE3A-206ENST00000604860 PPP1R15BQ5SWA1 713 aa11.46□□□□□ -0.57
UBE3A-206ENST00000604860 DDX27Q96GQ7 796 aaKnown RBP11.45□□□□□ -0.58
UBE3A-206ENST00000604860 KDM2AQ9Y2K7 1162 aa11.44□□□□□ -0.58
UBE3A-206ENST00000604860 LCE2DQ5TA82 110 aaPredicted RBP11.42□□□□□ -0.58
UBE3A-206ENST00000604860 FAM163AQ96GL9 167 aaPredicted RBP11.39□□□□□ -0.59
UBE3A-206ENST00000604860 ST18O60284 1047 aa11.37□□□□□ -0.59
UBE3A-206ENST00000604860 KHSRPQ92945 711 aaKnown RBP eCLIP11.36□□□□□ -0.593e-6■□□□□ 10.9
UBE3A-206ENST00000604860 EMILIN3Q9NT22 766 aa11.36□□□□□ -0.59
UBE3A-206ENST00000604860 SNPHO15079 494 aa11.35□□□□□ -0.59
UBE3A-206ENST00000604860 DOK7Q18PE1 504 aa11.35□□□□□ -0.59
UBE3A-206ENST00000604860 UPF1Q92900 1129 aaKnown RBP eCLIP11.34□□□□□ -0.59
UBE3A-206ENST00000604860 CAMK2BQ13554 666 aa11.33□□□□□ -0.6
UBE3A-206ENST00000604860 WDR70Q9NW82 654 aa11.33□□□□□ -0.6
UBE3A-206ENST00000604860 SLC34A2O95436 690 aa11.32□□□□□ -0.6
UBE3A-206ENST00000604860 ARSIQ5FYB1 569 aa11.32□□□□□ -0.6
UBE3A-206ENST00000604860 GPR153Q6NV75 609 aa11.31□□□□□ -0.6
UBE3A-206ENST00000604860 ZNF710Q8N1W2 664 aa11.31□□□□□ -0.6
UBE3A-206ENST00000604860 PCDHGA4Q9Y5G9 962 aa11.31□□□□□ -0.6
UBE3A-206ENST00000604860 VSIG10Q8N0Z9 540 aa11.3□□□□□ -0.6
UBE3A-206ENST00000604860 OXER1Q8TDS5 423 aa11.3□□□□□ -0.6
UBE3A-206ENST00000604860 PTCD2Q8WV60 388 aaKnown RBP11.3□□□□□ -0.6
UBE3A-206ENST00000604860 E2F4Q16254 413 aa11.29□□□□□ -0.6
UBE3A-206ENST00000604860 MARVELD3Q96A59 401 aa11.29□□□□□ -0.6
UBE3A-206ENST00000604860 HOXB1P14653 301 aaPredicted RBP11.27□□□□□ -0.61
UBE3A-206ENST00000604860 KCNV2Q8TDN2 545 aa11.27□□□□□ -0.61
UBE3A-206ENST00000604860 RIMBP2O15034 1052 aa11.26□□□□□ -0.61
UBE3A-206ENST00000604860 NUDT7P0C024 238 aa11.26□□□□□ -0.61
UBE3A-206ENST00000604860 DPYSL4O14531 572 aa11.25□□□□□ -0.61
UBE3A-206ENST00000604860 ZSWIM6Q9HCJ5 1215 aa11.25□□□□□ -0.61
UBE3A-206ENST00000604860 SLC24A1O60721 1099 aa11.24□□□□□ -0.61
UBE3A-206ENST00000604860 KDM4FA0A1W2PPD8 638 aa11.23□□□□□ -0.61
UBE3A-206ENST00000604860 MAP3K9P80192 1104 aa11.21□□□□□ -0.61
UBE3A-206ENST00000604860 POTEB3A0JP26 581 aa11.19□□□□□ -0.62
UBE3A-206ENST00000604860 EMP3P54852 163 aa11.19□□□□□ -0.62
UBE3A-206ENST00000604860 POTEBQ6S5H4 581 aa11.19□□□□□ -0.62
UBE3A-206ENST00000604860 EVI5O60447 810 aa11.18□□□□□ -0.62
UBE3A-206ENST00000604860 TBC1D12O60347 775 aa11.17□□□□□ -0.62
UBE3A-206ENST00000604860 LHX6Q9UPM6 363 aa11.17□□□□□ -0.62
UBE3A-206ENST00000604860 ARIH1Q9Y4X5 557 aaPredicted RBP11.16□□□□□ -0.62
UBE3A-206ENST00000604860 FAM205CA6NFA0 338 aa11.15□□□□□ -0.62
UBE3A-206ENST00000604860 POTEGQ6S5H5 508 aa11.15□□□□□ -0.62
UBE3A-206ENST00000604860 ZNF316A6NFI3 1004 aaPredicted RBP11.13□□□□□ -0.63
UBE3A-206ENST00000604860 POTEMA6NI47 508 aa11.13□□□□□ -0.63
UBE3A-206ENST00000604860 PDIA6Q15084 440 aa11.13□□□□□ -0.63
UBE3A-206ENST00000604860 ARHGEF1Q92888 912 aaKnown RBP11.13□□□□□ -0.63
UBE3A-206ENST00000604860 HS3ST6Q96QI5 342 aa11.12□□□□□ -0.63
UBE3A-206ENST00000604860 ANO8Q9HCE9 1232 aaPredicted RBP11.12□□□□□ -0.63
UBE3A-206ENST00000604860 ERBB3P21860 1342 aa11.11□□□□□ -0.63
UBE3A-206ENST00000604860 VARS2Q5ST30 1063 aaKnown RBP11.11□□□□□ -0.63
UBE3A-206ENST00000604860 P3H3Q8IVL6 736 aa11.11□□□□□ -0.63
UBE3A-206ENST00000604860 DDX12PQ92771 950 aa11.07□□□□□ -0.64
UBE3A-206ENST00000604860 SPDYE16A6NNV3 312 aaPredicted RBP11.06□□□□□ -0.64
UBE3A-206ENST00000604860 SEMA3EO15041 775 aa11.05□□□□□ -0.64
UBE3A-206ENST00000604860 MLLT3P42568 568 aaPredicted RBP11.05□□□□□ -0.64
UBE3A-206ENST00000604860 ZNF454Q8N9F8 522 aa11.05□□□□□ -0.64
UBE3A-206ENST00000604860 FOSBP53539 338 aa11.04□□□□□ -0.64
UBE3A-206ENST00000604860 PCDHGA10Q9Y5H3 936 aa11.04□□□□□ -0.64
UBE3A-206ENST00000604860 GRXCR2A6NFK2 248 aa11.02□□□□□ -0.65
UBE3A-206ENST00000604860 PTGER2P43116 358 aa11.02□□□□□ -0.65
UBE3A-206ENST00000604860 PRIM1P49642 420 aaKnown RBP11.02□□□□□ -0.65
UBE3A-206ENST00000604860 POTEEQ6S8J3 1075 aa11.02□□□□□ -0.65
UBE3A-206ENST00000604860 JPH4Q96JJ6 628 aa11.01□□□□□ -0.65
UBE3A-206ENST00000604860 PPP4R3BQ5MIZ7 849 aa10.98□□□□□ -0.65
UBE3A-206ENST00000604860 CDAN1Q8IWY9 1227 aa10.98□□□□□ -0.65
UBE3A-206ENST00000604860 ZNF687Q8N1G0 1237 aa10.98□□□□□ -0.65
UBE3A-206ENST00000604860 ADAM33Q9BZ11 813 aa10.98□□□□□ -0.65
UBE3A-206ENST00000604860 AXIN2Q9Y2T1 843 aa10.98□□□□□ -0.65
UBE3A-206ENST00000604860 PHF14O94880 888 aa10.97□□□□□ -0.65
UBE3A-206ENST00000604860 NBR1Q14596 966 aa10.97□□□□□ -0.65
UBE3A-206ENST00000604860 PSDA5PKW4 1024 aaPredicted RBP10.96□□□□□ -0.65
UBE3A-206ENST00000604860 OSBPP22059 807 aa10.96□□□□□ -0.65
UBE3A-206ENST00000604860 ZDHHC16Q969W1 377 aa10.96□□□□□ -0.65
UBE3A-206ENST00000604860 RBM33Q96EV2 1170 aaKnown RBP10.96□□□□□ -0.65
UBE3A-206ENST00000604860 TESPA1A2RU30 521 aaPredicted RBP10.95□□□□□ -0.66
UBE3A-206ENST00000604860 TYW1BQ6NUM6 668 aa10.95□□□□□ -0.66
UBE3A-206ENST00000604860 KRTAP3-3Q9BYR6 98 aa10.95□□□□□ -0.66
UBE3A-206ENST00000604860 KRTAP3-2Q9BYR7 98 aa10.95□□□□□ -0.66
UBE3A-206ENST00000604860 PSEN2P49810 448 aa10.94□□□□□ -0.66
UBE3A-206ENST00000604860 TSR1Q2NL82 804 aaKnown RBP10.92□□□□□ -0.66
UBE3A-206ENST00000604860 EPAS1Q99814 870 aa10.92□□□□□ -0.66
UBE3A-206ENST00000604860 EN1Q05925 392 aaPredicted RBP10.91□□□□□ -0.66
UBE3A-206ENST00000604860 DMRTA1Q5VZB9 504 aa10.91□□□□□ -0.66
UBE3A-206ENST00000604860 KCNK17Q96T54 332 aa10.91□□□□□ -0.66
UBE3A-206ENST00000604860 BCL2L12Q9HB09 334 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms