RNA–Protein interactions for RNA: ENST00000603784.1

AC004004.1-201, humanhuman

BASIC

Gene AC004004.1, Length 250 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004004.1-201ENST00000603784 CD109Q6YHK3 1445 aa16.11■□□□□ 0.17
AC004004.1-201ENST00000603784 CDK13Q14004 1512 aaKnown RBP16.1■□□□□ 0.17
AC004004.1-201ENST00000603784 ABCA9Q8IUA7 1624 aa16.09■□□□□ 0.17
AC004004.1-201ENST00000603784 COL17A1Q9UMD9 1497 aaPredicted RBP16.09■□□□□ 0.17
AC004004.1-201ENST00000603784 ATP1B4Q9UN42 357 aaPredicted RBP16.08■□□□□ 0.16
AC004004.1-201ENST00000603784 HECW1Q76N89 1606 aa16.08■□□□□ 0.16
AC004004.1-201ENST00000603784 LRRIQ1Q96JM4 1722 aa16.08■□□□□ 0.16
AC004004.1-201ENST00000603784 FMN1Q68DA7 1419 aa16.07■□□□□ 0.16
AC004004.1-201ENST00000603784 MAGI3Q5TCQ9 1506 aa16.07■□□□□ 0.16
AC004004.1-201ENST00000603784 POLA2Q14181 598 aa16.05■□□□□ 0.16
AC004004.1-201ENST00000603784 PCF11O94913 1555 aaKnown RBP16.03■□□□□ 0.16
AC004004.1-201ENST00000603784 PLEKHD1A6NEE1 506 aa16.02■□□□□ 0.16
AC004004.1-201ENST00000603784 TTC37Q6PGP7 1564 aa16■□□□□ 0.15
AC004004.1-201ENST00000603784 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.99■□□□□ 0.15
AC004004.1-201ENST00000603784 CLIP1P30622 1438 aa15.99■□□□□ 0.15
AC004004.1-201ENST00000603784 KIF14Q15058 1648 aa15.97■□□□□ 0.15
AC004004.1-201ENST00000603784 ARAP3Q8WWN8 1544 aa15.94■□□□□ 0.14
AC004004.1-201ENST00000603784 CASKIN1Q8WXD9 1431 aa15.94■□□□□ 0.14
AC004004.1-201ENST00000603784 MYO5CQ9NQX4 1742 aa15.93■□□□□ 0.14
AC004004.1-201ENST00000603784 NEO1Q92859 1461 aa15.92■□□□□ 0.14
AC004004.1-201ENST00000603784 CFAP74Q9C0B2 1584 aa15.92■□□□□ 0.14
AC004004.1-201ENST00000603784 FRMPD1Q5SYB0 1578 aa15.91■□□□□ 0.14
AC004004.1-201ENST00000603784 FYCO1Q9BQS8 1478 aa15.91■□□□□ 0.14
AC004004.1-201ENST00000603784 KDM4FA0A1W2PPD8 638 aa15.9■□□□□ 0.14
AC004004.1-201ENST00000603784 LOC105371045A0A1W2PR82 267 aa15.9■□□□□ 0.14
AC004004.1-201ENST00000603784 CEP162Q5TB80 1403 aa15.9■□□□□ 0.14
AC004004.1-201ENST00000603784 FANCAO15360 1455 aa15.9■□□□□ 0.14
AC004004.1-201ENST00000603784 CCDC18Q5T9S5 1454 aa15.9■□□□□ 0.14
AC004004.1-201ENST00000603784 TROQ12816 1431 aaPredicted RBP15.89■□□□□ 0.13
AC004004.1-201ENST00000603784 RAPGEF3O95398 923 aa15.89■□□□□ 0.13
AC004004.1-201ENST00000603784 CDK11AQ9UQ88 783 aaPredicted RBP15.89■□□□□ 0.13
AC004004.1-201ENST00000603784 RICTORQ6R327 1708 aa15.88■□□□□ 0.13
AC004004.1-201ENST00000603784 ADGRL1O94910 1474 aa15.88■□□□□ 0.13
AC004004.1-201ENST00000603784 PHLDB1Q86UU1 1377 aa15.87■□□□□ 0.13
AC004004.1-201ENST00000603784 AKNAQ7Z591 1439 aa15.87■□□□□ 0.13
AC004004.1-201ENST00000603784 ZBTB12Q9Y330 459 aaPredicted RBP15.86■□□□□ 0.13
AC004004.1-201ENST00000603784 PLCH2O75038 1416 aa15.85■□□□□ 0.13
AC004004.1-201ENST00000603784 CDC42BPBQ9Y5S2 1711 aa15.84■□□□□ 0.13
AC004004.1-201ENST00000603784 DENND4BO75064 1496 aaPredicted RBP15.83■□□□□ 0.12
AC004004.1-201ENST00000603784 ARHGAP5Q13017 1502 aa15.83■□□□□ 0.12
AC004004.1-201ENST00000603784 CDC42BPAQ5VT25 1732 aa15.82■□□□□ 0.12
AC004004.1-201ENST00000603784 PREX2Q70Z35 1606 aa15.81■□□□□ 0.12
AC004004.1-201ENST00000603784 ARHGEF40Q8TER5 1519 aa15.78■□□□□ 0.12
AC004004.1-201ENST00000603784 SCAPERQ9BY12 1400 aa15.78■□□□□ 0.12
AC004004.1-201ENST00000603784 EFCAB2Q5VUJ9 269 aa15.77■□□□□ 0.12
AC004004.1-201ENST00000603784 ZMYM4Q5VZL5 1548 aa15.77■□□□□ 0.11
AC004004.1-201ENST00000603784 POGZQ7Z3K3 1410 aa15.76■□□□□ 0.11
AC004004.1-201ENST00000603784 SIGLEC1Q9BZZ2 1709 aa15.74■□□□□ 0.11
AC004004.1-201ENST00000603784 ZFYVE16Q7Z3T8 1539 aa15.74■□□□□ 0.11
AC004004.1-201ENST00000603784 ITSN2Q9NZM3 1697 aa15.74■□□□□ 0.11
AC004004.1-201ENST00000603784 YEATS2Q9ULM3 1422 aa15.74■□□□□ 0.11
AC004004.1-201ENST00000603784 BCORL1Q5H9F3 1711 aa15.73■□□□□ 0.11
AC004004.1-201ENST00000603784 MTUS2Q5JR59 1369 aa15.73■□□□□ 0.11
AC004004.1-201ENST00000603784 ABCC1P33527 1531 aa15.72■□□□□ 0.11
AC004004.1-201ENST00000603784 EHBP1L1Q8N3D4 1523 aa15.72■□□□□ 0.11
AC004004.1-201ENST00000603784 SAMD9LQ8IVG5 1584 aa15.7■□□□□ 0.1
AC004004.1-201ENST00000603784 ARID4BQ4LE39 1312 aaPredicted RBP15.7■□□□□ 0.1
AC004004.1-201ENST00000603784 ADAMTSL3P82987 1691 aa15.7■□□□□ 0.1
AC004004.1-201ENST00000603784 VPS8Q8N3P4 1428 aa15.69■□□□□ 0.1
AC004004.1-201ENST00000603784 ARHGEF12Q9NZN5 1544 aa15.69■□□□□ 0.1
AC004004.1-201ENST00000603784 GPATCH8Q9UKJ3 1502 aaKnown RBP15.69■□□□□ 0.1
AC004004.1-201ENST00000603784 ZNF777Q9ULD5 760 aaPredicted RBP15.69■□□□□ 0.1
AC004004.1-201ENST00000603784 ZNF518AQ6AHZ1 1483 aa15.69■□□□□ 0.1
AC004004.1-201ENST00000603784 TIAM1Q13009 1591 aa15.69■□□□□ 0.1
AC004004.1-201ENST00000603784 MADDQ8WXG6 1647 aa15.68■□□□□ 0.1
AC004004.1-201ENST00000603784 KDM5CP41229 1560 aa15.68■□□□□ 0.1
AC004004.1-201ENST00000603784 MAGI2Q86UL8 1455 aa15.68■□□□□ 0.1
AC004004.1-201ENST00000603784 AFAP1Q8N556 730 aa15.68■□□□□ 0.1
AC004004.1-201ENST00000603784 HECW2Q9P2P5 1572 aa15.67■□□□□ 0.1
AC004004.1-201ENST00000603784 MKRN4PQ13434 485 aaPredicted RBP15.67■□□□□ 0.1
AC004004.1-201ENST00000603784 TRAPPC8Q9Y2L5 1435 aa15.67■□□□□ 0.1
AC004004.1-201ENST00000603784 SUPT6HQ7KZ85 1726 aaKnown RBP15.66■□□□□ 0.1
AC004004.1-201ENST00000603784 CCNB3Q8WWL7 1395 aa15.66■□□□□ 0.1
AC004004.1-201ENST00000603784 MYT1LQ9UL68 1186 aa15.66■□□□□ 0.1
AC004004.1-201ENST00000603784 SYCP2Q9BX26 1530 aa15.66■□□□□ 0.1
AC004004.1-201ENST00000603784 RIMS1Q86UR5 1692 aaKnown RBP15.66■□□□□ 0.1
AC004004.1-201ENST00000603784 ABCA6Q8N139 1617 aa15.65■□□□□ 0.1
AC004004.1-201ENST00000603784 RBM42Q9BTD8 480 aaKnown RBP15.65■□□□□ 0.1
AC004004.1-201ENST00000603784 DIP2CQ9Y2E4 1556 aa15.64■□□□□ 0.09
AC004004.1-201ENST00000603784 KIDINS220Q9ULH0 1771 aa15.62■□□□□ 0.09
AC004004.1-201ENST00000603784 C9orf84Q5VXU9 1444 aa15.62■□□□□ 0.09
AC004004.1-201ENST00000603784 MLECQ14165 292 aa15.62■□□□□ 0.09
AC004004.1-201ENST00000603784 CFDP1Q9UEE9 299 aaPredicted RBP15.62■□□□□ 0.09
AC004004.1-201ENST00000603784 ATP10AO60312 1499 aa15.62■□□□□ 0.09
AC004004.1-201ENST00000603784 FER1L4A9Z1Z3 1794 aa15.62■□□□□ 0.09
AC004004.1-201ENST00000603784 PTPRMP28827 1452 aa15.61■□□□□ 0.09
AC004004.1-201ENST00000603784 NCOA2Q15596 1464 aa15.61■□□□□ 0.09
AC004004.1-201ENST00000603784 HNRNPMP52272 730 aaKnown RBP eCLIP15.61■□□□□ 0.09
AC004004.1-201ENST00000603784 LRRC9Q6ZRR7 1453 aa15.59■□□□□ 0.09
AC004004.1-201ENST00000603784 MLH3Q9UHC1 1453 aa15.59■□□□□ 0.09
AC004004.1-201ENST00000603784 ZNF644Q9H582 1327 aaPredicted RBP15.58■□□□□ 0.08
AC004004.1-201ENST00000603784 KANK4Q5T7N3 995 aaPredicted RBP15.56■□□□□ 0.08
AC004004.1-201ENST00000603784 PLEKHH2Q8IVE3 1493 aa15.56■□□□□ 0.08
AC004004.1-201ENST00000603784 REREQ9P2R6 1566 aa15.55■□□□□ 0.08
AC004004.1-201ENST00000603784 INO80Q9ULG1 1556 aaPredicted RBP15.55■□□□□ 0.08
AC004004.1-201ENST00000603784 ATP7AQ04656 1500 aa15.54■□□□□ 0.08
AC004004.1-201ENST00000603784 MAP3K1Q13233 1512 aa15.54■□□□□ 0.08
AC004004.1-201ENST00000603784 KIAA1107Q9UPP5 1409 aa15.54■□□□□ 0.08
AC004004.1-201ENST00000603784 SPAG9O60271 1321 aaKnown RBP15.54■□□□□ 0.08
AC004004.1-201ENST00000603784 CAMSAP2Q08AD1 1489 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms