RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 NCOA2Q15596 1464 aa24.35■■□□□ 1.49
CDCA3-211ENST00000603043 PHLDB1Q86UU1 1377 aa24.34■■□□□ 1.49
CDCA3-211ENST00000603043 CCNB3Q8WWL7 1395 aa24.34■■□□□ 1.49
CDCA3-211ENST00000603043 GPATCH8Q9UKJ3 1502 aaKnown RBP24.33■■□□□ 1.49
CDCA3-211ENST00000603043 ITSN2Q9NZM3 1697 aa24.32■■□□□ 1.48
CDCA3-211ENST00000603043 AKNAQ7Z591 1439 aa24.31■■□□□ 1.48
CDCA3-211ENST00000603043 EFCAB2Q5VUJ9 269 aa24.31■■□□□ 1.48
CDCA3-211ENST00000603043 COL17A1Q9UMD9 1497 aaPredicted RBP24.3■■□□□ 1.48
CDCA3-211ENST00000603043 ADGRL1O94910 1474 aa24.26■■□□□ 1.47
CDCA3-211ENST00000603043 CFDP1Q9UEE9 299 aaPredicted RBP24.24■■□□□ 1.47
CDCA3-211ENST00000603043 SAMD9LQ8IVG5 1584 aa24.22■■□□□ 1.47
CDCA3-211ENST00000603043 ZNF777Q9ULD5 760 aaPredicted RBP24.21■■□□□ 1.47
CDCA3-211ENST00000603043 DENND4BO75064 1496 aaPredicted RBP24.21■■□□□ 1.47
CDCA3-211ENST00000603043 ABCC1P33527 1531 aa24.21■■□□□ 1.47
CDCA3-211ENST00000603043 RICTORQ6R327 1708 aa24.21■■□□□ 1.47
CDCA3-211ENST00000603043 SCAPERQ9BY12 1400 aa24.2■■□□□ 1.46
CDCA3-211ENST00000603043 FRMPD1Q5SYB0 1578 aa24.19■■□□□ 1.46
CDCA3-211ENST00000603043 MYOM3Q5VTT5 1437 aa24.18■■□□□ 1.46
CDCA3-211ENST00000603043 RAPGEF3O95398 923 aa24.18■■□□□ 1.46
CDCA3-211ENST00000603043 POGZQ7Z3K3 1410 aa24.16■■□□□ 1.46
CDCA3-211ENST00000603043 PLEKHH2Q8IVE3 1493 aa24.15■■□□□ 1.46
CDCA3-211ENST00000603043 PPARGC1BQ86YN6 1023 aaKnown RBP24.14■■□□□ 1.46
CDCA3-211ENST00000603043 SYCP2Q9BX26 1530 aa24.14■■□□□ 1.46
CDCA3-211ENST00000603043 ARHGEF12Q9NZN5 1544 aa24.14■■□□□ 1.45
CDCA3-211ENST00000603043 MIA2Q96PC5 1412 aa24.12■■□□□ 1.45
CDCA3-211ENST00000603043 CAMSAP2Q08AD1 1489 aa24.12■■□□□ 1.45
CDCA3-211ENST00000603043 ZNF518AQ6AHZ1 1483 aa24.12■■□□□ 1.45
CDCA3-211ENST00000603043 KIAA1107Q9UPP5 1409 aa24.12■■□□□ 1.45
CDCA3-211ENST00000603043 ZNF644Q9H582 1327 aaPredicted RBP24.12■■□□□ 1.45
CDCA3-211ENST00000603043 ZMYM4Q5VZL5 1548 aa24.1■■□□□ 1.45
CDCA3-211ENST00000603043 TRAPPC8Q9Y2L5 1435 aa24.09■■□□□ 1.45
CDCA3-211ENST00000603043 KDM5CP41229 1560 aa24.08■■□□□ 1.45
CDCA3-211ENST00000603043 FGD6Q6ZV73 1430 aa24.07■■□□□ 1.44
CDCA3-211ENST00000603043 HNRNPMP52272 730 aaKnown RBP eCLIP24.07■■□□□ 1.44
CDCA3-211ENST00000603043 PTPN23Q9H3S7 1636 aa24.06■■□□□ 1.44
CDCA3-211ENST00000603043 AFAP1Q8N556 730 aa24.06■■□□□ 1.44
CDCA3-211ENST00000603043 MBD5Q9P267 1494 aa24.04■■□□□ 1.44
CDCA3-211ENST00000603043 HECW2Q9P2P5 1572 aa24.03■■□□□ 1.44
CDCA3-211ENST00000603043 MAGI2Q86UL8 1455 aa24.02■■□□□ 1.44
CDCA3-211ENST00000603043 ZFYVE16Q7Z3T8 1539 aa24.01■■□□□ 1.43
CDCA3-211ENST00000603043 ARHGEF40Q8TER5 1519 aa24.01■■□□□ 1.43
CDCA3-211ENST00000603043 ARHGEF5Q12774 1597 aa24■■□□□ 1.43
CDCA3-211ENST00000603043 TCOF1Q13428 1488 aaKnown RBP24■■□□□ 1.43
CDCA3-211ENST00000603043 CCDC141Q6ZP82 1450 aa23.99■■□□□ 1.43
CDCA3-211ENST00000603043 MLH3Q9UHC1 1453 aa23.98■■□□□ 1.43
CDCA3-211ENST00000603043 YEATS2Q9ULM3 1422 aa23.97■■□□□ 1.43
CDCA3-211ENST00000603043 MYT1LQ9UL68 1186 aa23.97■■□□□ 1.43
CDCA3-211ENST00000603043 KIDINS220Q9ULH0 1771 aa23.97■■□□□ 1.43
CDCA3-211ENST00000603043 RSPH4AQ5TD94 716 aa23.96■■□□□ 1.43
CDCA3-211ENST00000603043 INO80Q9ULG1 1556 aaPredicted RBP23.95■■□□□ 1.42
CDCA3-211ENST00000603043 SPAG9O60271 1321 aaKnown RBP23.95■■□□□ 1.42
CDCA3-211ENST00000603043 ATP7AQ04656 1500 aa23.94■■□□□ 1.42
CDCA3-211ENST00000603043 ABCA6Q8N139 1617 aa23.93■■□□□ 1.42
CDCA3-211ENST00000603043 DIP2CQ9Y2E4 1556 aa23.91■■□□□ 1.42
CDCA3-211ENST00000603043 DNMT1P26358 1616 aaKnown RBP23.91■■□□□ 1.42
CDCA3-211ENST00000603043 CROCC2H7BZ55 1655 aa23.91■■□□□ 1.42
CDCA3-211ENST00000603043 FAM50AQ14320 339 aaKnown RBP23.91■■□□□ 1.42
CDCA3-211ENST00000603043 TSPY4P0CV99 314 aa23.89■■□□□ 1.41
CDCA3-211ENST00000603043 TSPY10P0CW01 314 aa23.89■■□□□ 1.41
CDCA3-211ENST00000603043 ATP10AO60312 1499 aa23.88■■□□□ 1.41
CDCA3-211ENST00000603043 RTEL1-TNFRSF6BF6WH68 1400 aa23.88■■□□□ 1.41
CDCA3-211ENST00000603043 MAST1Q9Y2H9 1570 aa23.87■■□□□ 1.41
CDCA3-211ENST00000603043 DAPK1P53355 1430 aa23.87■■□□□ 1.41
CDCA3-211ENST00000603043 C9orf84Q5VXU9 1444 aa23.87■■□□□ 1.41
CDCA3-211ENST00000603043 ABCC5O15440 1437 aa23.86■■□□□ 1.41
CDCA3-211ENST00000603043 RRBP1Q9P2E9 1410 aaKnown RBP23.86■■□□□ 1.41
CDCA3-211ENST00000603043 SIGLEC1Q9BZZ2 1709 aa23.85■■□□□ 1.41
CDCA3-211ENST00000603043 SHANK2Q9UPX8 1470 aa23.84■■□□□ 1.41
CDCA3-211ENST00000603043 ADGBQ8N7X0 1667 aa23.84■■□□□ 1.41
CDCA3-211ENST00000603043 REREQ9P2R6 1566 aa23.84■■□□□ 1.41
CDCA3-211ENST00000603043 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.83■■□□□ 1.4
CDCA3-211ENST00000603043 ARID4BQ4LE39 1312 aaPredicted RBP23.8■■□□□ 1.4
CDCA3-211ENST00000603043 PLXNC1O60486 1568 aa23.79■■□□□ 1.4
CDCA3-211ENST00000603043 A2MP01023 1474 aa23.78■■□□□ 1.4
CDCA3-211ENST00000603043 BCORL1Q5H9F3 1711 aa23.75■■□□□ 1.39
CDCA3-211ENST00000603043 AGLP35573 1532 aa23.75■■□□□ 1.39
CDCA3-211ENST00000603043 CHIC2Q9UKJ5 165 aa23.74■■□□□ 1.39
CDCA3-211ENST00000603043 PTPRKQ15262 1439 aa23.72■■□□□ 1.39
CDCA3-211ENST00000603043 ITGAEP38570 1179 aa23.71■■□□□ 1.39
CDCA3-211ENST00000603043 DHX29Q7Z478 1369 aaKnown RBP23.71■■□□□ 1.39
CDCA3-211ENST00000603043 ANKRD30AQ9BXX3 1397 aa23.71■■□□□ 1.39
CDCA3-211ENST00000603043 ADGRL2O95490 1459 aa23.71■■□□□ 1.39
CDCA3-211ENST00000603043 KIF15Q9NS87 1388 aa23.7■■□□□ 1.38
CDCA3-211ENST00000603043 NCOA1Q15788 1441 aa23.69■■□□□ 1.38
CDCA3-211ENST00000603043 ADAMTSL3P82987 1691 aa23.69■■□□□ 1.38
CDCA3-211ENST00000603043 DUOX2Q9NRD8 1548 aa23.68■■□□□ 1.38
CDCA3-211ENST00000603043 RRP7BPQ9NSQ0 103 aa23.68■■□□□ 1.38
CDCA3-211ENST00000603043 KDM4FA0A1W2PPD8 638 aa23.67■■□□□ 1.38
CDCA3-211ENST00000603043 MLECQ14165 292 aa23.67■■□□□ 1.38
CDCA3-211ENST00000603043 MADDQ8WXG6 1647 aa23.64■■□□□ 1.37
CDCA3-211ENST00000603043 EIF2AK4Q9P2K8 1649 aaKnown RBP23.64■■□□□ 1.37
CDCA3-211ENST00000603043 FER1L4A9Z1Z3 1794 aa23.64■■□□□ 1.37
CDCA3-211ENST00000603043 ROCK1Q13464 1354 aa23.63■■□□□ 1.37
CDCA3-211ENST00000603043 ERBINQ96RT1 1412 aa23.62■■□□□ 1.37
CDCA3-211ENST00000603043 KIF3BO15066 747 aa23.61■■□□□ 1.37
CDCA3-211ENST00000603043 RIMS1Q86UR5 1692 aaKnown RBP23.59■■□□□ 1.37
CDCA3-211ENST00000603043 GGT6Q6P531 493 aa23.58■■□□□ 1.36
CDCA3-211ENST00000603043 RNF17Q9BXT8 1623 aaKnown RBP23.57■■□□□ 1.36
CDCA3-211ENST00000603043 ANKRD50Q9ULJ7 1429 aa23.56■■□□□ 1.36
CDCA3-211ENST00000603043 ESF1Q9H501 851 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms