RNA–Protein interactions for RNA: ENST00000602837.1

UBE2E3-211, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-211ENST00000602837 BCANQ96GW7 911 aa12.23□□□□□ -0.45
UBE2E3-211ENST00000602837 TOP2BQ02880 1626 aa12.22□□□□□ -0.45
UBE2E3-211ENST00000602837 AQRO60306 1485 aaKnown RBP eCLIP12.22□□□□□ -0.45
UBE2E3-211ENST00000602837 TDRD9Q8NDG6 1382 aaKnown RBP12.22□□□□□ -0.45
UBE2E3-211ENST00000602837 RYDENQ9NUL5 291 aaKnown RBP12.22□□□□□ -0.45
UBE2E3-211ENST00000602837 TARBP1Q13395 1621 aaKnown RBP12.22□□□□□ -0.45
UBE2E3-211ENST00000602837 MFRPQ9BY79 579 aa12.21□□□□□ -0.45
UBE2E3-211ENST00000602837 CABP2Q9NPB3 220 aa12.21□□□□□ -0.45
UBE2E3-211ENST00000602837 BIVM-ERCC5R4GMW8 1640 aa12.21□□□□□ -0.46
UBE2E3-211ENST00000602837 EFCAB3Q8N7B9 438 aa12.19□□□□□ -0.46
UBE2E3-211ENST00000602837 TRPC6Q9Y210 931 aa12.18□□□□□ -0.46
UBE2E3-211ENST00000602837 MS4A3Q96HJ5 214 aa12.17□□□□□ -0.46
UBE2E3-211ENST00000602837 EIF4G3O43432 1585 aaKnown RBP12.17□□□□□ -0.46
UBE2E3-211ENST00000602837 ABCA10Q8WWZ4 1543 aa12.14□□□□□ -0.47
UBE2E3-211ENST00000602837 PHF8Q9UPP1 1060 aa12.13□□□□□ -0.47
UBE2E3-211ENST00000602837 CADPS2Q86UW7 1296 aa12.12□□□□□ -0.47
UBE2E3-211ENST00000602837 TMEM106CQ9BVX2 250 aa12.12□□□□□ -0.47
UBE2E3-211ENST00000602837 GAPVD1Q14C86 1478 aa12.12□□□□□ -0.47
UBE2E3-211ENST00000602837 WDR97A6NE52 1622 aa12.11□□□□□ -0.47
UBE2E3-211ENST00000602837 PPP1R37O75864 691 aa12.11□□□□□ -0.47
UBE2E3-211ENST00000602837 FBXO22Q8NEZ5 403 aa12.11□□□□□ -0.47
UBE2E3-211ENST00000602837 GRIN2BQ13224 1484 aa12.1□□□□□ -0.47
UBE2E3-211ENST00000602837 EVX2Q03828 476 aa12.09□□□□□ -0.47
UBE2E3-211ENST00000602837 SNAPC4Q5SXM2 1469 aa12.08□□□□□ -0.47
UBE2E3-211ENST00000602837 HAX1O00165 279 aa12.08□□□□□ -0.48
UBE2E3-211ENST00000602837 SOX12O15370 315 aa12.08□□□□□ -0.48
UBE2E3-211ENST00000602837 NLRP6P59044 892 aa12.07□□□□□ -0.48
UBE2E3-211ENST00000602837 CHMP7Q8WUX9 453 aaPredicted RBP12.07□□□□□ -0.48
UBE2E3-211ENST00000602837 ABCA5Q8WWZ7 1642 aa12.07□□□□□ -0.48
UBE2E3-211ENST00000602837 PBRM1Q86U86 1689 aa12.06□□□□□ -0.48
UBE2E3-211ENST00000602837 GALR2O43603 387 aaPredicted RBP12.04□□□□□ -0.48
UBE2E3-211ENST00000602837 KIF27Q86VH2 1401 aa12.03□□□□□ -0.48
UBE2E3-211ENST00000602837 MAGI1Q96QZ7 1491 aaPredicted RBP12.03□□□□□ -0.48
UBE2E3-211ENST00000602837 GOLGA2Q08379 1002 aa12.02□□□□□ -0.49
UBE2E3-211ENST00000602837 MS4A4AQ96JQ5 239 aa12.02□□□□□ -0.49
UBE2E3-211ENST00000602837 CHD1O14646 1710 aa12.01□□□□□ -0.49
UBE2E3-211ENST00000602837 TTLL13PA6NNM8 815 aa12.01□□□□□ -0.49
UBE2E3-211ENST00000602837 PRKCSHP14314 528 aaPredicted RBP12.01□□□□□ -0.49
UBE2E3-211ENST00000602837 BMP2KQ9NSY1 1161 aaPredicted RBP12□□□□□ -0.49
UBE2E3-211ENST00000602837 IGF1RP08069 1367 aa12□□□□□ -0.49
UBE2E3-211ENST00000602837 SYNJ2O15056 1496 aa12□□□□□ -0.49
UBE2E3-211ENST00000602837 TIE1P35590 1138 aa11.99□□□□□ -0.49
UBE2E3-211ENST00000602837 ERICH3Q5RHP9 1530 aa11.99□□□□□ -0.49
UBE2E3-211ENST00000602837 RUSC2Q8N2Y8 1516 aa11.99□□□□□ -0.49
UBE2E3-211ENST00000602837 FHAD1B1AJZ9 1412 aa11.97□□□□□ -0.49
UBE2E3-211ENST00000602837 MKRN3Q13064 507 aaKnown RBP11.97□□□□□ -0.49
UBE2E3-211ENST00000602837 NBR1Q14596 966 aa11.97□□□□□ -0.49
UBE2E3-211ENST00000602837 ADAMTS12P58397 1594 aa11.96□□□□□ -0.49
UBE2E3-211ENST00000602837 FAM9AQ8IZU1 332 aaPredicted RBP11.96□□□□□ -0.49
UBE2E3-211ENST00000602837 CARMIL1Q5VZK9 1371 aa11.94□□□□□ -0.5
UBE2E3-211ENST00000602837 WDR70Q9NW82 654 aa11.93□□□□□ -0.5
UBE2E3-211ENST00000602837 TRIM35Q9UPQ4 493 aa11.93□□□□□ -0.5
UBE2E3-211ENST00000602837 GRIN2AQ12879 1464 aa11.93□□□□□ -0.5
UBE2E3-211ENST00000602837 TPRNQ4KMQ1 711 aa11.9□□□□□ -0.5
UBE2E3-211ENST00000602837 KCNV2Q8TDN2 545 aa11.89□□□□□ -0.51
UBE2E3-211ENST00000602837 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.89□□□□□ -0.51
UBE2E3-211ENST00000602837 CUL7Q14999 1698 aa11.89□□□□□ -0.51
UBE2E3-211ENST00000602837 ATN1P54259 1190 aaPredicted RBP11.88□□□□□ -0.51
UBE2E3-211ENST00000602837 NCKAP5LQ9HCH0 1330 aa11.87□□□□□ -0.51
UBE2E3-211ENST00000602837 CEP170Q5SW79 1584 aa11.87□□□□□ -0.51
UBE2E3-211ENST00000602837 NUP160Q12769 1436 aa11.86□□□□□ -0.51
UBE2E3-211ENST00000602837 ILDR1Q86SU0 546 aaPredicted RBP11.86□□□□□ -0.51
UBE2E3-211ENST00000602837 CLASP1Q7Z460 1538 aa11.86□□□□□ -0.51
UBE2E3-211ENST00000602837 RAPGEF2Q9Y4G8 1499 aa11.85□□□□□ -0.51
UBE2E3-211ENST00000602837 DPY19L2Q6NUT2 758 aa11.85□□□□□ -0.51
UBE2E3-211ENST00000602837 P3H3Q8IVL6 736 aa11.85□□□□□ -0.51
UBE2E3-211ENST00000602837 ATMINO43313 823 aaPredicted RBP11.84□□□□□ -0.51
UBE2E3-211ENST00000602837 CLCN6P51797 869 aa11.84□□□□□ -0.51
UBE2E3-211ENST00000602837 EEA1Q15075 1411 aa11.83□□□□□ -0.52
UBE2E3-211ENST00000602837 ARHGEF11O15085 1522 aa11.82□□□□□ -0.52
UBE2E3-211ENST00000602837 JPH4Q96JJ6 628 aa11.82□□□□□ -0.52
UBE2E3-211ENST00000602837 LARP6Q9BRS8 491 aaKnown RBP11.82□□□□□ -0.52
UBE2E3-211ENST00000602837 RIMBP3CA6NJZ7 1639 aa11.82□□□□□ -0.52
UBE2E3-211ENST00000602837 RIMBP3BA6NNM3 1639 aa11.82□□□□□ -0.52
UBE2E3-211ENST00000602837 RIMBP3Q9UFD9 1639 aa11.82□□□□□ -0.52
UBE2E3-211ENST00000602837 GABBR2O75899 941 aa11.81□□□□□ -0.52
UBE2E3-211ENST00000602837 CYB5RLQ6IPT4 315 aa11.81□□□□□ -0.52
UBE2E3-211ENST00000602837 ASTLQ6HA08 431 aaPredicted RBP11.8□□□□□ -0.52
UBE2E3-211ENST00000602837 PRXQ9BXM0 1461 aa11.8□□□□□ -0.52
UBE2E3-211ENST00000602837 PDE4AP27815 886 aa11.79□□□□□ -0.52
UBE2E3-211ENST00000602837 POTEHQ6S545 545 aa11.79□□□□□ -0.52
UBE2E3-211ENST00000602837 PDCD7Q8N8D1 485 aaKnown RBP11.79□□□□□ -0.52
UBE2E3-211ENST00000602837 CRISPLD2Q9H0B8 497 aa11.79□□□□□ -0.52
UBE2E3-211ENST00000602837 KIAA0586Q9BVV6 1533 aa11.79□□□□□ -0.52
UBE2E3-211ENST00000602837 E2F4Q16254 413 aa11.78□□□□□ -0.52
UBE2E3-211ENST00000602837 PRG4Q92954 1404 aaPredicted RBP11.77□□□□□ -0.52
UBE2E3-211ENST00000602837 ERCC6L2Q5T890 1561 aa11.76□□□□□ -0.53
UBE2E3-211ENST00000602837 IRX5P78411 483 aaPredicted RBP11.76□□□□□ -0.53
UBE2E3-211ENST00000602837 TTBK1Q5TCY1 1321 aaPredicted RBP11.76□□□□□ -0.53
UBE2E3-211ENST00000602837 RANGAP1P46060 587 aaPredicted RBP11.75□□□□□ -0.53
UBE2E3-211ENST00000602837 MFSD10Q14728 455 aa11.75□□□□□ -0.53
UBE2E3-211ENST00000602837 ARAP1Q96P48 1450 aa11.75□□□□□ -0.53
UBE2E3-211ENST00000602837 UBTFP17480 764 aaKnown RBP11.74□□□□□ -0.53
UBE2E3-211ENST00000602837 DDX27Q96GQ7 796 aaKnown RBP11.74□□□□□ -0.53
UBE2E3-211ENST00000602837 SHROOM2Q13796 1616 aa11.73□□□□□ -0.53
UBE2E3-211ENST00000602837 PELP1Q8IZL8 1130 aaKnown RBP11.73□□□□□ -0.53
UBE2E3-211ENST00000602837 IQGAP2Q13576 1575 aa11.72□□□□□ -0.53
UBE2E3-211ENST00000602837 MICALL2Q8IY33 904 aa11.72□□□□□ -0.53
UBE2E3-211ENST00000602837 IER5LQ5T953 404 aa11.71□□□□□ -0.53
UBE2E3-211ENST00000602837 ARHGEF1Q92888 912 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms