RNA–Protein interactions for RNA: ENST00000602550.5

HCG18-245, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 559 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-245ENST00000602550 SIGLEC1Q9BZZ2 1709 aa23.86■■□□□ 1.41
HCG18-245ENST00000602550 PLCH2O75038 1416 aa23.85■■□□□ 1.41
HCG18-245ENST00000602550 ATP10AO60312 1499 aa23.83■■□□□ 1.41
HCG18-245ENST00000602550 DMRT2Q9Y5R5 561 aa23.82■■□□□ 1.4
HCG18-245ENST00000602550 EFCAB2Q5VUJ9 269 aa23.81■■□□□ 1.4
HCG18-245ENST00000602550 C9orf84Q5VXU9 1444 aa23.79■■□□□ 1.4
HCG18-245ENST00000602550 ARHGEF12Q9NZN5 1544 aa23.79■■□□□ 1.4
HCG18-245ENST00000602550 SETD1BQ9UPS6 1966 aaKnown RBP23.78■■□□□ 1.4
HCG18-245ENST00000602550 PREX1Q8TCU6 1659 aa23.78■■□□□ 1.4
HCG18-245ENST00000602550 CDK13Q14004 1512 aaKnown RBP23.77■■□□□ 1.4
HCG18-245ENST00000602550 CDK11AQ9UQ88 783 aaPredicted RBP23.76■■□□□ 1.39
HCG18-245ENST00000602550 CEBPAP49715 358 aaPredicted RBP23.74■■□□□ 1.39
HCG18-245ENST00000602550 MYO5CQ9NQX4 1742 aa23.73■■□□□ 1.39
HCG18-245ENST00000602550 ATP1B4Q9UN42 357 aaPredicted RBP23.72■■□□□ 1.39
HCG18-245ENST00000602550 ZNF518AQ6AHZ1 1483 aa23.69■■□□□ 1.38
HCG18-245ENST00000602550 FMN1Q68DA7 1419 aa23.69■■□□□ 1.38
HCG18-245ENST00000602550 DISP3Q9P2K9 1392 aa23.69■■□□□ 1.38
HCG18-245ENST00000602550 UHRF1BP1Q6BDS2 1440 aa23.68■■□□□ 1.38
HCG18-245ENST00000602550 MYT1LQ9UL68 1186 aa23.68■■□□□ 1.38
HCG18-245ENST00000602550 STRCQ7RTU9 1775 aa23.68■■□□□ 1.38
HCG18-245ENST00000602550 AFAP1Q8N556 730 aa23.66■■□□□ 1.38
HCG18-245ENST00000602550 KDM5CP41229 1560 aa23.62■■□□□ 1.37
HCG18-245ENST00000602550 SOCS7O14512 581 aa23.62■■□□□ 1.37
HCG18-245ENST00000602550 UBTFP17480 764 aaKnown RBP23.62■■□□□ 1.37
HCG18-245ENST00000602550 ESF1Q9H501 851 aaKnown RBP23.62■■□□□ 1.37
HCG18-245ENST00000602550 ARHGAP5Q13017 1502 aa23.62■■□□□ 1.37
HCG18-245ENST00000602550 KIF14Q15058 1648 aa23.62■■□□□ 1.37
HCG18-245ENST00000602550 ILDR2Q71H61 639 aa23.61■■□□□ 1.37
HCG18-245ENST00000602550 PTPRTO14522 1441 aa23.6■■□□□ 1.37
HCG18-245ENST00000602550 CLIP1P30622 1438 aa23.6■■□□□ 1.37
HCG18-245ENST00000602550 TROQ12816 1431 aaPredicted RBP23.6■■□□□ 1.37
HCG18-245ENST00000602550 REREQ9P2R6 1566 aa23.59■■□□□ 1.37
HCG18-245ENST00000602550 DIP2CQ9Y2E4 1556 aa23.57■■□□□ 1.36
HCG18-245ENST00000602550 MLH3Q9UHC1 1453 aa23.56■■□□□ 1.36
HCG18-245ENST00000602550 TRAPPC8Q9Y2L5 1435 aa23.54■■□□□ 1.36
HCG18-245ENST00000602550 ARHGAP35Q9NRY4 1499 aa23.54■■□□□ 1.36
HCG18-245ENST00000602550 C3P01024 1663 aa23.54■■□□□ 1.36
HCG18-245ENST00000602550 AGLP35573 1532 aa23.53■■□□□ 1.36
HCG18-245ENST00000602550 CDC42BPBQ9Y5S2 1711 aa23.5■■□□□ 1.35
HCG18-245ENST00000602550 EHMT2Q96KQ7 1210 aa23.5■■□□□ 1.35
HCG18-245ENST00000602550 ABCA6Q8N139 1617 aa23.5■■□□□ 1.35
HCG18-245ENST00000602550 CNTLNQ9NXG0 1405 aa23.49■■□□□ 1.35
HCG18-245ENST00000602550 IQSEC2Q5JU85 1478 aa23.49■■□□□ 1.35
HCG18-245ENST00000602550 SPATA31D1Q6ZQQ2 1576 aa23.46■■□□□ 1.35
HCG18-245ENST00000602550 LTBP4Q8N2S1 1624 aa23.46■■□□□ 1.35
HCG18-245ENST00000602550 NCOA1Q15788 1441 aa23.44■■□□□ 1.34
HCG18-245ENST00000602550 ABCC1P33527 1531 aa23.43■■□□□ 1.34
HCG18-245ENST00000602550 PREX2Q70Z35 1606 aa23.43■■□□□ 1.34
HCG18-245ENST00000602550 LRRIQ1Q96JM4 1722 aa23.42■■□□□ 1.34
HCG18-245ENST00000602550 ITSN2Q9NZM3 1697 aa23.41■■□□□ 1.34
HCG18-245ENST00000602550 KIDINS220Q9ULH0 1771 aa23.4■■□□□ 1.34
HCG18-245ENST00000602550 NPATQ14207 1427 aa23.4■■□□□ 1.34
HCG18-245ENST00000602550 CCDC18Q5T9S5 1454 aa23.38■■□□□ 1.33
HCG18-245ENST00000602550 CAMSAP1Q5T5Y3 1602 aa23.37■■□□□ 1.33
HCG18-245ENST00000602550 MROH2AA6NES4 1674 aa23.36■■□□□ 1.33
HCG18-245ENST00000602550 ZMYM3Q14202 1370 aa23.36■■□□□ 1.33
HCG18-245ENST00000602550 CASKIN1Q8WXD9 1431 aa23.34■■□□□ 1.33
HCG18-245ENST00000602550 CDC42BPAQ5VT25 1732 aa23.33■■□□□ 1.33
HCG18-245ENST00000602550 SPAG9O60271 1321 aaKnown RBP23.33■■□□□ 1.32
HCG18-245ENST00000602550 PKD2Q13563 968 aa23.32■■□□□ 1.32
HCG18-245ENST00000602550 ZNF777Q9ULD5 760 aaPredicted RBP23.32■■□□□ 1.32
HCG18-245ENST00000602550 NCKAP5LQ9HCH0 1330 aa23.32■■□□□ 1.32
HCG18-245ENST00000602550 SAMD9LQ8IVG5 1584 aa23.31■■□□□ 1.32
HCG18-245ENST00000602550 UBAP1LF5GYI3 381 aa23.3■■□□□ 1.32
HCG18-245ENST00000602550 ZNF335Q9H4Z2 1342 aaPredicted RBP23.28■■□□□ 1.32
HCG18-245ENST00000602550 SUPT6HQ7KZ85 1726 aaKnown RBP23.27■■□□□ 1.32
HCG18-245ENST00000602550 PLA2R1Q13018 1463 aa23.26■■□□□ 1.31
HCG18-245ENST00000602550 HNRNPMP52272 730 aaKnown RBP eCLIP23.26■■□□□ 1.312e-7■□□□□ 10.1
HCG18-245ENST00000602550 SYCP2Q9BX26 1530 aa23.24■■□□□ 1.31
HCG18-245ENST00000602550 PPP6R1Q9UPN7 881 aa23.24■■□□□ 1.31
HCG18-245ENST00000602550 CLTCQ00610 1675 aaKnown RBP23.23■■□□□ 1.31
HCG18-245ENST00000602550 KIAA1107Q9UPP5 1409 aa23.23■■□□□ 1.31
HCG18-245ENST00000602550 GPATCH8Q9UKJ3 1502 aaKnown RBP23.23■■□□□ 1.31
HCG18-245ENST00000602550 ZNF142P52746 1687 aaPredicted RBP23.22■■□□□ 1.31
HCG18-245ENST00000602550 GGT6Q6P531 493 aa23.22■■□□□ 1.31
HCG18-245ENST00000602550 PLEKHH2Q8IVE3 1493 aa23.22■■□□□ 1.31
HCG18-245ENST00000602550 ATP7AQ04656 1500 aa23.22■■□□□ 1.31
HCG18-245ENST00000602550 CFDP1Q9UEE9 299 aaPredicted RBP23.21■■□□□ 1.31
HCG18-245ENST00000602550 PTPRKQ15262 1439 aa23.21■■□□□ 1.31
HCG18-245ENST00000602550 A2MP01023 1474 aa23.21■■□□□ 1.31
HCG18-245ENST00000602550 FYCO1Q9BQS8 1478 aa23.21■■□□□ 1.31
HCG18-245ENST00000602550 MYO3AQ8NEV4 1616 aa23.2■■□□□ 1.3
HCG18-245ENST00000602550 CEP170BQ9Y4F5 1589 aaPredicted RBP23.2■■□□□ 1.3
HCG18-245ENST00000602550 TCOF1Q13428 1488 aaKnown RBP23.2■■□□□ 1.3
HCG18-245ENST00000602550 PLXNC1O60486 1568 aa23.18■■□□□ 1.3
HCG18-245ENST00000602550 CHIC1Q5VXU3 224 aa23.17■■□□□ 1.3
HCG18-245ENST00000602550 INO80Q9ULG1 1556 aaPredicted RBP23.16■■□□□ 1.3
HCG18-245ENST00000602550 CCNB3Q8WWL7 1395 aa23.14■■□□□ 1.3
HCG18-245ENST00000602550 A2ML1A8K2U0 1454 aa23.11■■□□□ 1.29
HCG18-245ENST00000602550 ADGBQ8N7X0 1667 aa23.11■■□□□ 1.29
HCG18-245ENST00000602550 TOM1O60784 492 aa23.1■■□□□ 1.29
HCG18-245ENST00000602550 DNMT1P26358 1616 aaKnown RBP23.08■■□□□ 1.28
HCG18-245ENST00000602550 SCAF1Q9H7N4 1312 aaKnown RBP23.08■■□□□ 1.28
HCG18-245ENST00000602550 MTUS2Q5JR59 1369 aa23.06■■□□□ 1.28
HCG18-245ENST00000602550 CPS1P31327 1500 aa23.05■■□□□ 1.28
HCG18-245ENST00000602550 HSPA1LP34931 641 aa23.05■■□□□ 1.28
HCG18-245ENST00000602550 PIP4K2BP78356 416 aa23.04■■□□□ 1.28
HCG18-245ENST00000602550 RTEL1-TNFRSF6BF6WH68 1400 aa23.04■■□□□ 1.28
HCG18-245ENST00000602550 DHX29Q7Z478 1369 aaKnown RBP23.03■■□□□ 1.28
HCG18-245ENST00000602550 TNRQ92752 1358 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms