RNA–Protein interactions for RNA: ENST00000600474.1

COLGALT1-205, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

TSL 4

Gene COLGALT1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-205ENST00000600474 TROQ12816 1431 aaPredicted RBP12.89□□□□□ -0.35
COLGALT1-205ENST00000600474 NCOA2Q15596 1464 aa12.89□□□□□ -0.35
COLGALT1-205ENST00000600474 KDM5BQ9UGL1 1544 aa12.88□□□□□ -0.35
COLGALT1-205ENST00000600474 ZCCHC11Q5TAX3 1644 aaKnown RBP12.88□□□□□ -0.35
COLGALT1-205ENST00000600474 KIF14Q15058 1648 aa12.88□□□□□ -0.35
COLGALT1-205ENST00000600474 PLEKHD1A6NEE1 506 aa12.87□□□□□ -0.35
COLGALT1-205ENST00000600474 BCORL1Q5H9F3 1711 aa12.87□□□□□ -0.35
COLGALT1-205ENST00000600474 RRBP1Q9P2E9 1410 aaKnown RBP12.87□□□□□ -0.35
COLGALT1-205ENST00000600474 ITSN2Q9NZM3 1697 aa12.86□□□□□ -0.35
COLGALT1-205ENST00000600474 CCNB3Q8WWL7 1395 aa12.85□□□□□ -0.35
COLGALT1-205ENST00000600474 PHLDB1Q86UU1 1377 aa12.84□□□□□ -0.35
COLGALT1-205ENST00000600474 MYOM3Q5VTT5 1437 aa12.84□□□□□ -0.35
COLGALT1-205ENST00000600474 FGD6Q6ZV73 1430 aa12.82□□□□□ -0.36
COLGALT1-205ENST00000600474 HSPA2P54652 639 aa12.81□□□□□ -0.36
COLGALT1-205ENST00000600474 PTPN23Q9H3S7 1636 aa12.8□□□□□ -0.36
COLGALT1-205ENST00000600474 CDC42BPAQ5VT25 1732 aa12.79□□□□□ -0.36
COLGALT1-205ENST00000600474 FAM50AQ14320 339 aaKnown RBP12.79□□□□□ -0.36
COLGALT1-205ENST00000600474 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.79□□□□□ -0.36
COLGALT1-205ENST00000600474 MIA2Q96PC5 1412 aa12.79□□□□□ -0.36
COLGALT1-205ENST00000600474 WDR7Q9Y4E6 1490 aa12.78□□□□□ -0.36
COLGALT1-205ENST00000600474 RIMS1Q86UR5 1692 aaKnown RBP12.78□□□□□ -0.36
COLGALT1-205ENST00000600474 MYO5CQ9NQX4 1742 aa12.78□□□□□ -0.36
COLGALT1-205ENST00000600474 ARAP3Q8WWN8 1544 aa12.78□□□□□ -0.36
COLGALT1-205ENST00000600474 FRMPD1Q5SYB0 1578 aa12.77□□□□□ -0.36
COLGALT1-205ENST00000600474 TCOF1Q13428 1488 aaKnown RBP12.75□□□□□ -0.37
COLGALT1-205ENST00000600474 PREX2Q70Z35 1606 aa12.75□□□□□ -0.37
COLGALT1-205ENST00000600474 SIGLEC1Q9BZZ2 1709 aa12.74□□□□□ -0.37
COLGALT1-205ENST00000600474 STRCQ7RTU9 1775 aa12.74□□□□□ -0.37
COLGALT1-205ENST00000600474 GPATCH8Q9UKJ3 1502 aaKnown RBP12.73□□□□□ -0.37
COLGALT1-205ENST00000600474 TTC37Q6PGP7 1564 aa12.73□□□□□ -0.37
COLGALT1-205ENST00000600474 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.72□□□□□ -0.371e-6■■■■■ 29.5
COLGALT1-205ENST00000600474 CD109Q6YHK3 1445 aa12.72□□□□□ -0.37
COLGALT1-205ENST00000600474 CDC42BPBQ9Y5S2 1711 aa12.72□□□□□ -0.37
COLGALT1-205ENST00000600474 ITGAEP38570 1179 aa12.72□□□□□ -0.37
COLGALT1-205ENST00000600474 CFDP1Q9UEE9 299 aaPredicted RBP12.72□□□□□ -0.37
COLGALT1-205ENST00000600474 KCNH8Q96L42 1107 aa12.71□□□□□ -0.37
COLGALT1-205ENST00000600474 LTBP4Q8N2S1 1624 aa12.7□□□□□ -0.38
COLGALT1-205ENST00000600474 CAMSAP2Q08AD1 1489 aa12.7□□□□□ -0.38
COLGALT1-205ENST00000600474 ABCA9Q8IUA7 1624 aa12.7□□□□□ -0.38
COLGALT1-205ENST00000600474 ARHGAP5Q13017 1502 aa12.69□□□□□ -0.38
COLGALT1-205ENST00000600474 DNMT1P26358 1616 aaKnown RBP12.69□□□□□ -0.38
COLGALT1-205ENST00000600474 ARHGEF40Q8TER5 1519 aa12.67□□□□□ -0.38
COLGALT1-205ENST00000600474 ZNF777Q9ULD5 760 aaPredicted RBP12.67□□□□□ -0.38
COLGALT1-205ENST00000600474 CROCC2H7BZ55 1655 aa12.67□□□□□ -0.38
COLGALT1-205ENST00000600474 ADGBQ8N7X0 1667 aa12.67□□□□□ -0.38
COLGALT1-205ENST00000600474 PLEKHH2Q8IVE3 1493 aa12.66□□□□□ -0.38
COLGALT1-205ENST00000600474 CFAP74Q9C0B2 1584 aa12.64□□□□□ -0.39
COLGALT1-205ENST00000600474 PLCH2O75038 1416 aa12.64□□□□□ -0.39
COLGALT1-205ENST00000600474 ARHGEF5Q12774 1597 aa12.64□□□□□ -0.39
COLGALT1-205ENST00000600474 MED1Q15648 1581 aaPredicted RBP12.64□□□□□ -0.39
COLGALT1-205ENST00000600474 SAMD9LQ8IVG5 1584 aa12.64□□□□□ -0.39
COLGALT1-205ENST00000600474 DAPK1P53355 1430 aa12.63□□□□□ -0.39
COLGALT1-205ENST00000600474 EFCAB2Q5VUJ9 269 aa12.63□□□□□ -0.39
COLGALT1-205ENST00000600474 GCC2Q8IWJ2 1684 aa12.63□□□□□ -0.39
COLGALT1-205ENST00000600474 IQSEC2Q5JU85 1478 aa12.62□□□□□ -0.39
COLGALT1-205ENST00000600474 SETD5Q9C0A6 1442 aa12.62□□□□□ -0.39
COLGALT1-205ENST00000600474 ZNF644Q9H582 1327 aaPredicted RBP12.62□□□□□ -0.39
COLGALT1-205ENST00000600474 PREX1Q8TCU6 1659 aa12.61□□□□□ -0.39
COLGALT1-205ENST00000600474 AKNAQ7Z591 1439 aa12.61□□□□□ -0.39
COLGALT1-205ENST00000600474 ABCC5O15440 1437 aa12.6□□□□□ -0.39
COLGALT1-205ENST00000600474 YEATS2Q9ULM3 1422 aa12.6□□□□□ -0.39
COLGALT1-205ENST00000600474 SHANK2Q9UPX8 1470 aa12.59□□□□□ -0.39
COLGALT1-205ENST00000600474 SYCP2Q9BX26 1530 aa12.59□□□□□ -0.39
COLGALT1-205ENST00000600474 RSPH4AQ5TD94 716 aa12.59□□□□□ -0.39
COLGALT1-205ENST00000600474 KIAA1107Q9UPP5 1409 aa12.59□□□□□ -0.39
COLGALT1-205ENST00000600474 CCDC141Q6ZP82 1450 aa12.59□□□□□ -0.39
COLGALT1-205ENST00000600474 ABCC1P33527 1531 aa12.58□□□□□ -0.4
COLGALT1-205ENST00000600474 HFM1A2PYH4 1435 aa12.58□□□□□ -0.4
COLGALT1-205ENST00000600474 PTPRKQ15262 1439 aa12.58□□□□□ -0.4
COLGALT1-205ENST00000600474 CCER1Q8TC90 406 aaPredicted RBP12.58□□□□□ -0.4
COLGALT1-205ENST00000600474 FANCAO15360 1455 aa12.58□□□□□ -0.4
COLGALT1-205ENST00000600474 ROCK1Q13464 1354 aa12.57□□□□□ -0.4
COLGALT1-205ENST00000600474 TSPY4P0CV99 314 aa12.57□□□□□ -0.4
COLGALT1-205ENST00000600474 TSPY10P0CW01 314 aa12.57□□□□□ -0.4
COLGALT1-205ENST00000600474 CHIC2Q9UKJ5 165 aa12.57□□□□□ -0.4
COLGALT1-205ENST00000600474 RAB3GAP2Q9H2M9 1393 aa12.56□□□□□ -0.4
COLGALT1-205ENST00000600474 RAPGEF3O95398 923 aa12.56□□□□□ -0.4
COLGALT1-205ENST00000600474 ADGRL2O95490 1459 aa12.56□□□□□ -0.4
COLGALT1-205ENST00000600474 RICTORQ6R327 1708 aa12.56□□□□□ -0.4
COLGALT1-205ENST00000600474 ACIN1Q9UKV3 1341 aaKnown RBP12.56□□□□□ -0.4
COLGALT1-205ENST00000600474 FER1L4A9Z1Z3 1794 aa12.56□□□□□ -0.4
COLGALT1-205ENST00000600474 MAST1Q9Y2H9 1570 aa12.56□□□□□ -0.4
COLGALT1-205ENST00000600474 ANKRD30AQ9BXX3 1397 aa12.56□□□□□ -0.4
COLGALT1-205ENST00000600474 C9orf84Q5VXU9 1444 aa12.55□□□□□ -0.4
COLGALT1-205ENST00000600474 HNRNPMP52272 730 aaKnown RBP eCLIP12.55□□□□□ -0.4
COLGALT1-205ENST00000600474 NAIPQ13075 1403 aa12.54□□□□□ -0.4
COLGALT1-205ENST00000600474 MBD5Q9P267 1494 aa12.54□□□□□ -0.4
COLGALT1-205ENST00000600474 SRCAPQ6ZRS2 3230 aa12.54□□□□□ -0.4
COLGALT1-205ENST00000600474 RRP7BPQ9NSQ0 103 aa12.53□□□□□ -0.4
COLGALT1-205ENST00000600474 PTPRTO14522 1441 aa12.53□□□□□ -0.4
COLGALT1-205ENST00000600474 NEO1Q92859 1461 aa12.53□□□□□ -0.4
COLGALT1-205ENST00000600474 ARHGEF12Q9NZN5 1544 aa12.51□□□□□ -0.41
COLGALT1-205ENST00000600474 PLXNC1O60486 1568 aa12.51□□□□□ -0.41
COLGALT1-205ENST00000600474 NCOA1Q15788 1441 aa12.5□□□□□ -0.41
COLGALT1-205ENST00000600474 ZMYM4Q5VZL5 1548 aa12.5□□□□□ -0.41
COLGALT1-205ENST00000600474 SCAPERQ9BY12 1400 aa12.49□□□□□ -0.41
COLGALT1-205ENST00000600474 TRAPPC8Q9Y2L5 1435 aa12.47□□□□□ -0.41
COLGALT1-205ENST00000600474 KIF15Q9NS87 1388 aa12.47□□□□□ -0.41
COLGALT1-205ENST00000600474 SPAG9O60271 1321 aaKnown RBP12.47□□□□□ -0.41
COLGALT1-205ENST00000600474 ARID4BQ4LE39 1312 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms