RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 ITSN2Q9NZM3 1697 aa18.89■□□□□ 0.61
TGFB1-204ENST00000600196 MYO5CQ9NQX4 1742 aa18.89■□□□□ 0.61
TGFB1-204ENST00000600196 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.89■□□□□ 0.61
TGFB1-204ENST00000600196 KIAA1107Q9UPP5 1409 aa18.88■□□□□ 0.61
TGFB1-204ENST00000600196 CFAP74Q9C0B2 1584 aa18.88■□□□□ 0.61
TGFB1-204ENST00000600196 FANCAO15360 1455 aa18.87■□□□□ 0.61
TGFB1-204ENST00000600196 PREX2Q70Z35 1606 aa18.87■□□□□ 0.61
TGFB1-204ENST00000600196 CDC42BPAQ5VT25 1732 aa18.85■□□□□ 0.61
TGFB1-204ENST00000600196 ARHGAP5Q13017 1502 aa18.84■□□□□ 0.61
TGFB1-204ENST00000600196 FGD6Q6ZV73 1430 aa18.83■□□□□ 0.61
TGFB1-204ENST00000600196 AKNAQ7Z591 1439 aa18.83■□□□□ 0.61
TGFB1-204ENST00000600196 CDC42BPBQ9Y5S2 1711 aa18.83■□□□□ 0.6
TGFB1-204ENST00000600196 TCOF1Q13428 1488 aaKnown RBP18.81■□□□□ 0.6
TGFB1-204ENST00000600196 RRBP1Q9P2E9 1410 aaKnown RBP18.81■□□□□ 0.6
TGFB1-204ENST00000600196 PPRC1Q5VV67 1664 aaKnown RBP18.8■□□□□ 0.6
TGFB1-204ENST00000600196 ADGRL1O94910 1474 aa18.77■□□□□ 0.59
TGFB1-204ENST00000600196 PPARGC1BQ86YN6 1023 aaKnown RBP18.76■□□□□ 0.59
TGFB1-204ENST00000600196 SCAPERQ9BY12 1400 aa18.75■□□□□ 0.59
TGFB1-204ENST00000600196 ZNF777Q9ULD5 760 aaPredicted RBP18.75■□□□□ 0.59
TGFB1-204ENST00000600196 DENND4BO75064 1496 aaPredicted RBP18.75■□□□□ 0.59
TGFB1-204ENST00000600196 PTPN23Q9H3S7 1636 aa18.74■□□□□ 0.59
TGFB1-204ENST00000600196 ABCC1P33527 1531 aa18.74■□□□□ 0.59
TGFB1-204ENST00000600196 SAMD9LQ8IVG5 1584 aa18.73■□□□□ 0.59
TGFB1-204ENST00000600196 CAMSAP2Q08AD1 1489 aa18.73■□□□□ 0.59
TGFB1-204ENST00000600196 MBD5Q9P267 1494 aa18.73■□□□□ 0.59
TGFB1-204ENST00000600196 TSPOAP1O95153 1857 aa18.73■□□□□ 0.59
TGFB1-204ENST00000600196 ARHGEF5Q12774 1597 aa18.72■□□□□ 0.59
TGFB1-204ENST00000600196 ZNF518AQ6AHZ1 1483 aa18.71■□□□□ 0.59
TGFB1-204ENST00000600196 TSPY4P0CV99 314 aa18.71■□□□□ 0.59
TGFB1-204ENST00000600196 TSPY10P0CW01 314 aa18.71■□□□□ 0.59
TGFB1-204ENST00000600196 ZNF644Q9H582 1327 aaPredicted RBP18.71■□□□□ 0.59
TGFB1-204ENST00000600196 MAGI2Q86UL8 1455 aa18.7■□□□□ 0.58
TGFB1-204ENST00000600196 RTEL1-TNFRSF6BF6WH68 1400 aa18.69■□□□□ 0.58
TGFB1-204ENST00000600196 POGZQ7Z3K3 1410 aa18.69■□□□□ 0.58
TGFB1-204ENST00000600196 HNRNPMP52272 730 aaKnown RBP eCLIP18.68■□□□□ 0.58
TGFB1-204ENST00000600196 CCDC141Q6ZP82 1450 aa18.68■□□□□ 0.58
TGFB1-204ENST00000600196 ARHGEF12Q9NZN5 1544 aa18.68■□□□□ 0.58
TGFB1-204ENST00000600196 FAM50AQ14320 339 aaKnown RBP18.67■□□□□ 0.58
TGFB1-204ENST00000600196 MLH3Q9UHC1 1453 aa18.66■□□□□ 0.58
TGFB1-204ENST00000600196 SHANK2Q9UPX8 1470 aa18.66■□□□□ 0.58
TGFB1-204ENST00000600196 SYCP2Q9BX26 1530 aa18.65■□□□□ 0.58
TGFB1-204ENST00000600196 KDM5CP41229 1560 aa18.65■□□□□ 0.58
TGFB1-204ENST00000600196 TRAPPC8Q9Y2L5 1435 aa18.65■□□□□ 0.58
TGFB1-204ENST00000600196 ABCC5O15440 1437 aa18.64■□□□□ 0.57
TGFB1-204ENST00000600196 COL17A1Q9UMD9 1497 aaPredicted RBP18.64■□□□□ 0.57
TGFB1-204ENST00000600196 ZMYM4Q5VZL5 1548 aa18.64■□□□□ 0.57
TGFB1-204ENST00000600196 AFAP1Q8N556 730 aa18.63■□□□□ 0.57
TGFB1-204ENST00000600196 SPAG9O60271 1321 aaKnown RBP18.63■□□□□ 0.57
TGFB1-204ENST00000600196 DAPK1P53355 1430 aa18.63■□□□□ 0.57
TGFB1-204ENST00000600196 KDM6BO15054 1643 aa18.63■□□□□ 0.57
TGFB1-204ENST00000600196 DNMT1P26358 1616 aaKnown RBP18.63■□□□□ 0.57
TGFB1-204ENST00000600196 RAPGEF3O95398 923 aa18.62■□□□□ 0.57
TGFB1-204ENST00000600196 ROCK1Q13464 1354 aa18.62■□□□□ 0.57
TGFB1-204ENST00000600196 MAST1Q9Y2H9 1570 aa18.62■□□□□ 0.57
TGFB1-204ENST00000600196 ACIN1Q9UKV3 1341 aaKnown RBP18.61■□□□□ 0.57
TGFB1-204ENST00000600196 TRIM26Q12899 539 aaPredicted RBP18.61■□□□□ 0.57
TGFB1-204ENST00000600196 RICTORQ6R327 1708 aa18.6■□□□□ 0.57
TGFB1-204ENST00000600196 ADGRL2O95490 1459 aa18.58■□□□□ 0.56
TGFB1-204ENST00000600196 ANKRD30AQ9BXX3 1397 aa18.57■□□□□ 0.56
TGFB1-204ENST00000600196 C9orf84Q5VXU9 1444 aa18.57■□□□□ 0.56
TGFB1-204ENST00000600196 FRMPD1Q5SYB0 1578 aa18.56■□□□□ 0.56
TGFB1-204ENST00000600196 NCOA1Q15788 1441 aa18.55■□□□□ 0.56
TGFB1-204ENST00000600196 HECW2Q9P2P5 1572 aa18.54■□□□□ 0.56
TGFB1-204ENST00000600196 INO80Q9ULG1 1556 aaPredicted RBP18.53■□□□□ 0.56
TGFB1-204ENST00000600196 ATP7AQ04656 1500 aa18.53■□□□□ 0.56
TGFB1-204ENST00000600196 CROCC2H7BZ55 1655 aa18.52■□□□□ 0.56
TGFB1-204ENST00000600196 ZFYVE16Q7Z3T8 1539 aa18.52■□□□□ 0.56
TGFB1-204ENST00000600196 ATP10AO60312 1499 aa18.52■□□□□ 0.55
TGFB1-204ENST00000600196 PLXNC1O60486 1568 aa18.51■□□□□ 0.55
TGFB1-204ENST00000600196 REREQ9P2R6 1566 aa18.51■□□□□ 0.55
TGFB1-204ENST00000600196 PTPRKQ15262 1439 aa18.5■□□□□ 0.55
TGFB1-204ENST00000600196 HRCP23327 699 aa18.5■□□□□ 0.55
TGFB1-204ENST00000600196 MYT1LQ9UL68 1186 aa18.5■□□□□ 0.55
TGFB1-204ENST00000600196 DHX29Q7Z478 1369 aaKnown RBP18.5■□□□□ 0.55
TGFB1-204ENST00000600196 KIDINS220Q9ULH0 1771 aa18.5■□□□□ 0.55
TGFB1-204ENST00000600196 PPP6R1Q9UPN7 881 aa18.47■□□□□ 0.55
TGFB1-204ENST00000600196 DUOX2Q9NRD8 1548 aa18.47■□□□□ 0.55
TGFB1-204ENST00000600196 HFM1A2PYH4 1435 aa18.47■□□□□ 0.55
TGFB1-204ENST00000600196 KIF15Q9NS87 1388 aa18.46■□□□□ 0.55
TGFB1-204ENST00000600196 ARHGEF40Q8TER5 1519 aa18.46■□□□□ 0.55
TGFB1-204ENST00000600196 A2MP01023 1474 aa18.46■□□□□ 0.54
TGFB1-204ENST00000600196 AGLP35573 1532 aa18.45■□□□□ 0.54
TGFB1-204ENST00000600196 ADGBQ8N7X0 1667 aa18.45■□□□□ 0.54
TGFB1-204ENST00000600196 ITGAEP38570 1179 aa18.45■□□□□ 0.54
TGFB1-204ENST00000600196 CHIC2Q9UKJ5 165 aa18.45■□□□□ 0.54
TGFB1-204ENST00000600196 ERBINQ96RT1 1412 aa18.45■□□□□ 0.54
TGFB1-204ENST00000600196 YEATS2Q9ULM3 1422 aa18.44■□□□□ 0.54
TGFB1-204ENST00000600196 DIP2CQ9Y2E4 1556 aa18.43■□□□□ 0.54
TGFB1-204ENST00000600196 RRP7BPQ9NSQ0 103 aa18.43■□□□□ 0.54
TGFB1-204ENST00000600196 ANKRD50Q9ULJ7 1429 aa18.41■□□□□ 0.54
TGFB1-204ENST00000600196 NAIPQ13075 1403 aa18.4■□□□□ 0.54
TGFB1-204ENST00000600196 ABCA6Q8N139 1617 aa18.4■□□□□ 0.54
TGFB1-204ENST00000600196 EIF2AK4Q9P2K8 1649 aaKnown RBP18.38■□□□□ 0.53
TGFB1-204ENST00000600196 BCORL1Q5H9F3 1711 aa18.38■□□□□ 0.53
TGFB1-204ENST00000600196 SETD5Q9C0A6 1442 aa18.38■□□□□ 0.53
TGFB1-204ENST00000600196 FAM135AQ9P2D6 1515 aa18.36■□□□□ 0.53
TGFB1-204ENST00000600196 KIF3BO15066 747 aa18.33■□□□□ 0.52
TGFB1-204ENST00000600196 GCC2Q8IWJ2 1684 aa18.33■□□□□ 0.52
TGFB1-204ENST00000600196 KANK1Q14678 1352 aa18.3■□□□□ 0.52
TGFB1-204ENST00000600196 ARID4BQ4LE39 1312 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms