RNA–Protein interactions for RNA: ENST00000599560.5

NUP62-216, Transcript of nucleoporin 62, humanhuman

TSL 2

Gene NUP62, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP62-216ENST00000599560 ARHGEF12Q9NZN5 1544 aa21.04■□□□□ 0.96
NUP62-216ENST00000599560 CFAP74Q9C0B2 1584 aa21.04■□□□□ 0.96
NUP62-216ENST00000599560 MAGI2Q86UL8 1455 aa20.98■□□□□ 0.95
NUP62-216ENST00000599560 LTBP4Q8N2S1 1624 aa20.97■□□□□ 0.95
NUP62-216ENST00000599560 FAM9AQ8IZU1 332 aaPredicted RBP20.97■□□□□ 0.95
NUP62-216ENST00000599560 PLEKHD1A6NEE1 506 aa20.94■□□□□ 0.94
NUP62-216ENST00000599560 SCAPERQ9BY12 1400 aa20.94■□□□□ 0.94
NUP62-216ENST00000599560 ATP10AO60312 1499 aa20.94■□□□□ 0.94
NUP62-216ENST00000599560 SETD1BQ9UPS6 1966 aaKnown RBP20.94■□□□□ 0.94
NUP62-216ENST00000599560 RANGAP1P46060 587 aaPredicted RBP20.91■□□□□ 0.94
NUP62-216ENST00000599560 C9orf84Q5VXU9 1444 aa20.91■□□□□ 0.94
NUP62-216ENST00000599560 DMRT2Q9Y5R5 561 aa20.91■□□□□ 0.94
NUP62-216ENST00000599560 UHRF1BP1Q6BDS2 1440 aa20.89■□□□□ 0.94
NUP62-216ENST00000599560 C3P01024 1663 aa20.89■□□□□ 0.93
NUP62-216ENST00000599560 PTPRTO14522 1441 aa20.88■□□□□ 0.93
NUP62-216ENST00000599560 CDK13Q14004 1512 aaKnown RBP20.88■□□□□ 0.93
NUP62-216ENST00000599560 PLCH2O75038 1416 aa20.86■□□□□ 0.93
NUP62-216ENST00000599560 MYO5CQ9NQX4 1742 aa20.81■□□□□ 0.92
NUP62-216ENST00000599560 IQSEC2Q5JU85 1478 aa20.8■□□□□ 0.92
NUP62-216ENST00000599560 DIP2CQ9Y2E4 1556 aa20.8■□□□□ 0.92
NUP62-216ENST00000599560 KDM5CP41229 1560 aa20.78■□□□□ 0.92
NUP62-216ENST00000599560 NCOA1Q15788 1441 aa20.78■□□□□ 0.92
NUP62-216ENST00000599560 ABCA6Q8N139 1617 aa20.77■□□□□ 0.92
NUP62-216ENST00000599560 KIF14Q15058 1648 aa20.76■□□□□ 0.91
NUP62-216ENST00000599560 AFAP1Q8N556 730 aa20.76■□□□□ 0.91
NUP62-216ENST00000599560 CSRNP3Q8WYN3 585 aa20.75■□□□□ 0.91
NUP62-216ENST00000599560 ZNF518AQ6AHZ1 1483 aa20.73■□□□□ 0.91
NUP62-216ENST00000599560 REREQ9P2R6 1566 aa20.72■□□□□ 0.91
NUP62-216ENST00000599560 CAMSAP1Q5T5Y3 1602 aa20.71■□□□□ 0.91
NUP62-216ENST00000599560 EFCAB2Q5VUJ9 269 aa20.71■□□□□ 0.91
NUP62-216ENST00000599560 ZNF335Q9H4Z2 1342 aaPredicted RBP20.71■□□□□ 0.91
NUP62-216ENST00000599560 TRAPPC8Q9Y2L5 1435 aa20.7■□□□□ 0.9
NUP62-216ENST00000599560 UBAP1LF5GYI3 381 aa20.68■□□□□ 0.9
NUP62-216ENST00000599560 NCKAP5LQ9HCH0 1330 aa20.67■□□□□ 0.9
NUP62-216ENST00000599560 CDC42BPBQ9Y5S2 1711 aa20.67■□□□□ 0.9
NUP62-216ENST00000599560 ARHGAP5Q13017 1502 aa20.66■□□□□ 0.9
NUP62-216ENST00000599560 MED1Q15648 1581 aaPredicted RBP20.65■□□□□ 0.9
NUP62-216ENST00000599560 AGLP35573 1532 aa20.65■□□□□ 0.9
NUP62-216ENST00000599560 MYT1LQ9UL68 1186 aa20.64■□□□□ 0.89
NUP62-216ENST00000599560 LRRIQ1Q96JM4 1722 aa20.64■□□□□ 0.89
NUP62-216ENST00000599560 MLH3Q9UHC1 1453 aa20.62■□□□□ 0.89
NUP62-216ENST00000599560 KIDINS220Q9ULH0 1771 aa20.62■□□□□ 0.89
NUP62-216ENST00000599560 ITSN2Q9NZM3 1697 aa20.59■□□□□ 0.89
NUP62-216ENST00000599560 SUPT6HQ7KZ85 1726 aaKnown RBP20.58■□□□□ 0.89
NUP62-216ENST00000599560 ATP1B4Q9UN42 357 aaPredicted RBP20.58■□□□□ 0.89
NUP62-216ENST00000599560 MROH2AA6NES4 1674 aa20.58■□□□□ 0.88
NUP62-216ENST00000599560 HSPA1LP34931 641 aa20.57■□□□□ 0.88
NUP62-216ENST00000599560 ABCC1P33527 1531 aa20.57■□□□□ 0.88
NUP62-216ENST00000599560 ESF1Q9H501 851 aaKnown RBP20.56■□□□□ 0.88
NUP62-216ENST00000599560 ZNF142P52746 1687 aaPredicted RBP20.56■□□□□ 0.88
NUP62-216ENST00000599560 MYO3AQ8NEV4 1616 aa20.56■□□□□ 0.88
NUP62-216ENST00000599560 TROQ12816 1431 aaPredicted RBP20.55■□□□□ 0.88
NUP62-216ENST00000599560 NPATQ14207 1427 aa20.54■□□□□ 0.88
NUP62-216ENST00000599560 CNTLNQ9NXG0 1405 aa20.54■□□□□ 0.88
NUP62-216ENST00000599560 PREX2Q70Z35 1606 aa20.53■□□□□ 0.88
NUP62-216ENST00000599560 TCOF1Q13428 1488 aaKnown RBP20.53■□□□□ 0.88
NUP62-216ENST00000599560 CLTCQ00610 1675 aaKnown RBP20.53■□□□□ 0.88
NUP62-216ENST00000599560 ZMYM3Q14202 1370 aa20.52■□□□□ 0.88
NUP62-216ENST00000599560 CEP170BQ9Y4F5 1589 aaPredicted RBP20.51■□□□□ 0.87
NUP62-216ENST00000599560 PLA2R1Q13018 1463 aa20.5■□□□□ 0.87
NUP62-216ENST00000599560 PIP4K2BP78356 416 aa20.49■□□□□ 0.87
NUP62-216ENST00000599560 ARHGAP35Q9NRY4 1499 aa20.48■□□□□ 0.87
NUP62-216ENST00000599560 SCAF1Q9H7N4 1312 aaKnown RBP20.48■□□□□ 0.87
NUP62-216ENST00000599560 CDC42BPAQ5VT25 1732 aa20.47■□□□□ 0.87
NUP62-216ENST00000599560 SAMD9LQ8IVG5 1584 aa20.46■□□□□ 0.87
NUP62-216ENST00000599560 PKD2Q13563 968 aa20.46■□□□□ 0.87
NUP62-216ENST00000599560 ALKQ9UM73 1620 aa20.45■□□□□ 0.87
NUP62-216ENST00000599560 PTPRKQ15262 1439 aa20.45■□□□□ 0.86
NUP62-216ENST00000599560 FMN1Q68DA7 1419 aa20.45■□□□□ 0.86
NUP62-216ENST00000599560 CDK11AQ9UQ88 783 aaPredicted RBP20.45■□□□□ 0.86
NUP62-216ENST00000599560 CLIP1P30622 1438 aa20.44■□□□□ 0.86
NUP62-216ENST00000599560 EEA1Q15075 1411 aa20.44■□□□□ 0.86
NUP62-216ENST00000599560 EHMT2Q96KQ7 1210 aa20.43■□□□□ 0.86
NUP62-216ENST00000599560 PPP6R1Q9UPN7 881 aa20.43■□□□□ 0.86
NUP62-216ENST00000599560 NEURL4Q96JN8 1562 aa20.41■□□□□ 0.86
NUP62-216ENST00000599560 DNMT1P26358 1616 aaKnown RBP20.4■□□□□ 0.86
NUP62-216ENST00000599560 POLR1AO95602 1720 aaPredicted RBP20.39■□□□□ 0.86
NUP62-216ENST00000599560 PLXNC1O60486 1568 aa20.39■□□□□ 0.85
NUP62-216ENST00000599560 SYCP2Q9BX26 1530 aa20.37■□□□□ 0.85
NUP62-216ENST00000599560 PHF23Q9BUL5 403 aaPredicted RBP20.35■□□□□ 0.85
NUP62-216ENST00000599560 SHANK2Q9UPX8 1470 aa20.35■□□□□ 0.85
NUP62-216ENST00000599560 CPS1P31327 1500 aa20.34■□□□□ 0.85
NUP62-216ENST00000599560 ATP7AQ04656 1500 aa20.34■□□□□ 0.85
NUP62-216ENST00000599560 TOM1O60784 492 aa20.34■□□□□ 0.85
NUP62-216ENST00000599560 A2ML1A8K2U0 1454 aa20.34■□□□□ 0.85
NUP62-216ENST00000599560 INO80Q9ULG1 1556 aaPredicted RBP20.34■□□□□ 0.85
NUP62-216ENST00000599560 SENP3Q9H4L4 574 aaPredicted RBP20.33■□□□□ 0.85
NUP62-216ENST00000599560 VWDEQ8N2E2 1590 aa20.33■□□□□ 0.84
NUP62-216ENST00000599560 HNRNPMP52272 730 aaKnown RBP eCLIP20.32■□□□□ 0.844e-7■■■■□ 26.7
NUP62-216ENST00000599560 ZNF777Q9ULD5 760 aaPredicted RBP20.32■□□□□ 0.84
NUP62-216ENST00000599560 SPAG9O60271 1321 aaKnown RBP20.31■□□□□ 0.84
NUP62-216ENST00000599560 GGT6Q6P531 493 aa20.31■□□□□ 0.84
NUP62-216ENST00000599560 STRCP1A6NGW2 1772 aa20.31■□□□□ 0.84
NUP62-216ENST00000599560 A2MP01023 1474 aa20.3■□□□□ 0.84
NUP62-216ENST00000599560 RGS17Q9UGC6 210 aaPredicted RBP20.3■□□□□ 0.84
NUP62-216ENST00000599560 UBTFP17480 764 aaKnown RBP20.29■□□□□ 0.84
NUP62-216ENST00000599560 GPATCH8Q9UKJ3 1502 aaKnown RBP20.26■□□□□ 0.83
NUP62-216ENST00000599560 FBXO31Q5XUX0 539 aaPredicted RBP20.25■□□□□ 0.83
NUP62-216ENST00000599560 ADGBQ8N7X0 1667 aa20.23■□□□□ 0.83
NUP62-216ENST00000599560 CCDC18Q5T9S5 1454 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms