RNA–Protein interactions for RNA: ENST00000599389.1

CEACAM1-213, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene CEACAM1, Length 1,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-213ENST00000599389 SAMD9Q5K651 1589 aa12.49□□□□□ -0.41
CEACAM1-213ENST00000599389 PTPRTO14522 1441 aa12.48□□□□□ -0.41
CEACAM1-213ENST00000599389 HECW1Q76N89 1606 aa12.48□□□□□ -0.41
CEACAM1-213ENST00000599389 PRXQ9BXM0 1461 aa12.48□□□□□ -0.41
CEACAM1-213ENST00000599389 NUP153P49790 1475 aaKnown RBP12.47□□□□□ -0.41
CEACAM1-213ENST00000599389 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.45□□□□□ -0.42
CEACAM1-213ENST00000599389 ARID3CA6NKF2 412 aa12.45□□□□□ -0.42
CEACAM1-213ENST00000599389 DMRT2Q9Y5R5 561 aa12.45□□□□□ -0.42
CEACAM1-213ENST00000599389 UHRF1BP1Q6BDS2 1440 aa12.43□□□□□ -0.42
CEACAM1-213ENST00000599389 PLPPR3Q6T4P5 718 aa12.43□□□□□ -0.42
CEACAM1-213ENST00000599389 C9orf84Q5VXU9 1444 aa12.42□□□□□ -0.42
CEACAM1-213ENST00000599389 ATP10AO60312 1499 aa12.41□□□□□ -0.42
CEACAM1-213ENST00000599389 C3P01024 1663 aa12.41□□□□□ -0.42
CEACAM1-213ENST00000599389 NCOA1Q15788 1441 aa12.39□□□□□ -0.43
CEACAM1-213ENST00000599389 MLECQ14165 292 aa12.38□□□□□ -0.43
CEACAM1-213ENST00000599389 REREQ9P2R6 1566 aa12.38□□□□□ -0.43
CEACAM1-213ENST00000599389 CEBPAP49715 358 aaPredicted RBP12.37□□□□□ -0.43
CEACAM1-213ENST00000599389 KDM5CP41229 1560 aa12.36□□□□□ -0.43
CEACAM1-213ENST00000599389 MED1Q15648 1581 aaPredicted RBP12.36□□□□□ -0.43
CEACAM1-213ENST00000599389 SCAPERQ9BY12 1400 aa12.35□□□□□ -0.43
CEACAM1-213ENST00000599389 DIP2CQ9Y2E4 1556 aa12.34□□□□□ -0.43
CEACAM1-213ENST00000599389 P3H3Q8IVL6 736 aa12.34□□□□□ -0.43
CEACAM1-213ENST00000599389 PLCH2O75038 1416 aa12.33□□□□□ -0.44
CEACAM1-213ENST00000599389 FAM9AQ8IZU1 332 aaPredicted RBP12.32□□□□□ -0.44
CEACAM1-213ENST00000599389 MYO5CQ9NQX4 1742 aa12.31□□□□□ -0.44
CEACAM1-213ENST00000599389 AGLP35573 1532 aa12.31□□□□□ -0.44
CEACAM1-213ENST00000599389 ABCA6Q8N139 1617 aa12.31□□□□□ -0.44
CEACAM1-213ENST00000599389 ZNF518AQ6AHZ1 1483 aa12.3□□□□□ -0.44
CEACAM1-213ENST00000599389 CAMSAP1Q5T5Y3 1602 aa12.3□□□□□ -0.44
CEACAM1-213ENST00000599389 TRAPPC8Q9Y2L5 1435 aa12.29□□□□□ -0.44
CEACAM1-213ENST00000599389 ZNF142P52746 1687 aaPredicted RBP12.29□□□□□ -0.44
CEACAM1-213ENST00000599389 PLEKHD1A6NEE1 506 aa12.29□□□□□ -0.44
CEACAM1-213ENST00000599389 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.29□□□□□ -0.44
CEACAM1-213ENST00000599389 HNRNPUL2Q1KMD3 747 aaKnown RBP12.29□□□□□ -0.44
CEACAM1-213ENST00000599389 PIAS4Q8N2W9 510 aaPredicted RBP12.29□□□□□ -0.44
CEACAM1-213ENST00000599389 MROH2AA6NES4 1674 aa12.28□□□□□ -0.44
CEACAM1-213ENST00000599389 CDK13Q14004 1512 aaKnown RBP12.27□□□□□ -0.45
CEACAM1-213ENST00000599389 PLA2R1Q13018 1463 aa12.25□□□□□ -0.45
CEACAM1-213ENST00000599389 NPATQ14207 1427 aa12.25□□□□□ -0.45
CEACAM1-213ENST00000599389 ZNF335Q9H4Z2 1342 aaPredicted RBP12.25□□□□□ -0.45
CEACAM1-213ENST00000599389 TCOF1Q13428 1488 aaKnown RBP12.24□□□□□ -0.45
CEACAM1-213ENST00000599389 MLH3Q9UHC1 1453 aa12.24□□□□□ -0.45
CEACAM1-213ENST00000599389 UBAP1LF5GYI3 381 aa12.24□□□□□ -0.45
CEACAM1-213ENST00000599389 CNTLNQ9NXG0 1405 aa12.23□□□□□ -0.45
CEACAM1-213ENST00000599389 KIF14Q15058 1648 aa12.23□□□□□ -0.45
CEACAM1-213ENST00000599389 MYO3AQ8NEV4 1616 aa12.23□□□□□ -0.45
CEACAM1-213ENST00000599389 KIDINS220Q9ULH0 1771 aa12.21□□□□□ -0.46
CEACAM1-213ENST00000599389 ALKQ9UM73 1620 aa12.2□□□□□ -0.46
CEACAM1-213ENST00000599389 CEP170BQ9Y4F5 1589 aaPredicted RBP12.2□□□□□ -0.46
CEACAM1-213ENST00000599389 SUPT6HQ7KZ85 1726 aaKnown RBP12.2□□□□□ -0.46
CEACAM1-213ENST00000599389 HSPA1LP34931 641 aa12.19□□□□□ -0.46
CEACAM1-213ENST00000599389 EFCAB2Q5VUJ9 269 aa12.19□□□□□ -0.46
CEACAM1-213ENST00000599389 CDC42BPBQ9Y5S2 1711 aa12.19□□□□□ -0.46
CEACAM1-213ENST00000599389 ABCC1P33527 1531 aa12.19□□□□□ -0.46
CEACAM1-213ENST00000599389 ITSN2Q9NZM3 1697 aa12.19□□□□□ -0.46
CEACAM1-213ENST00000599389 AFAP1Q8N556 730 aa12.18□□□□□ -0.46
CEACAM1-213ENST00000599389 ARHGAP5Q13017 1502 aa12.18□□□□□ -0.46
CEACAM1-213ENST00000599389 NCKAP5LQ9HCH0 1330 aa12.16□□□□□ -0.46
CEACAM1-213ENST00000599389 CPS1P31327 1500 aa12.16□□□□□ -0.46
CEACAM1-213ENST00000599389 PREX2Q70Z35 1606 aa12.16□□□□□ -0.46
CEACAM1-213ENST00000599389 POLR1AO95602 1720 aaPredicted RBP12.15□□□□□ -0.46
CEACAM1-213ENST00000599389 NEURL4Q96JN8 1562 aa12.14□□□□□ -0.47
CEACAM1-213ENST00000599389 PKD2Q13563 968 aa12.14□□□□□ -0.47
CEACAM1-213ENST00000599389 SRCAPQ6ZRS2 3230 aa12.14□□□□□ -0.47
CEACAM1-213ENST00000599389 CLTCQ00610 1675 aaKnown RBP12.13□□□□□ -0.47
CEACAM1-213ENST00000599389 PLXNC1O60486 1568 aa12.13□□□□□ -0.47
CEACAM1-213ENST00000599389 TROQ12816 1431 aaPredicted RBP12.12□□□□□ -0.47
CEACAM1-213ENST00000599389 PTPRKQ15262 1439 aa12.12□□□□□ -0.47
CEACAM1-213ENST00000599389 LRRIQ1Q96JM4 1722 aa12.12□□□□□ -0.47
CEACAM1-213ENST00000599389 ZMYM3Q14202 1370 aa12.12□□□□□ -0.47
CEACAM1-213ENST00000599389 DNMT1P26358 1616 aaKnown RBP12.11□□□□□ -0.47
CEACAM1-213ENST00000599389 VWDEQ8N2E2 1590 aa12.11□□□□□ -0.47
CEACAM1-213ENST00000599389 SAMD9LQ8IVG5 1584 aa12.1□□□□□ -0.47
CEACAM1-213ENST00000599389 ESF1Q9H501 851 aaKnown RBP12.1□□□□□ -0.47
CEACAM1-213ENST00000599389 SHANK2Q9UPX8 1470 aa12.09□□□□□ -0.47
CEACAM1-213ENST00000599389 CSRNP3Q8WYN3 585 aa12.09□□□□□ -0.47
CEACAM1-213ENST00000599389 PPP6R1Q9UPN7 881 aa12.09□□□□□ -0.47
CEACAM1-213ENST00000599389 A2ML1A8K2U0 1454 aa12.09□□□□□ -0.47
CEACAM1-213ENST00000599389 CDC42BPAQ5VT25 1732 aa12.08□□□□□ -0.48
CEACAM1-213ENST00000599389 TOM1O60784 492 aa12.07□□□□□ -0.48
CEACAM1-213ENST00000599389 PIP4K2BP78356 416 aa12.07□□□□□ -0.48
CEACAM1-213ENST00000599389 INO80Q9ULG1 1556 aaPredicted RBP12.07□□□□□ -0.48
CEACAM1-213ENST00000599389 RGS17Q9UGC6 210 aaPredicted RBP12.06□□□□□ -0.48
CEACAM1-213ENST00000599389 CLIP1P30622 1438 aa12.05□□□□□ -0.48
CEACAM1-213ENST00000599389 FMN1Q68DA7 1419 aa12.05□□□□□ -0.48
CEACAM1-213ENST00000599389 RNF17Q9BXT8 1623 aaKnown RBP12.05□□□□□ -0.48
CEACAM1-213ENST00000599389 SCAF1Q9H7N4 1312 aaKnown RBP12.05□□□□□ -0.48
CEACAM1-213ENST00000599389 STRCP1A6NGW2 1772 aa12.04□□□□□ -0.48
CEACAM1-213ENST00000599389 RANGAP1P46060 587 aaPredicted RBP12.03□□□□□ -0.48
CEACAM1-213ENST00000599389 MYT1LQ9UL68 1186 aa12.03□□□□□ -0.48
CEACAM1-213ENST00000599389 EEA1Q15075 1411 aa12.03□□□□□ -0.48
CEACAM1-213ENST00000599389 ATP7AQ04656 1500 aa12.03□□□□□ -0.48
CEACAM1-213ENST00000599389 SYNMO15061 1565 aa12.03□□□□□ -0.48
CEACAM1-213ENST00000599389 DEPDC5O75140 1603 aa12.03□□□□□ -0.48
CEACAM1-213ENST00000599389 SYCP2Q9BX26 1530 aa12.02□□□□□ -0.49
CEACAM1-213ENST00000599389 CDK11AQ9UQ88 783 aaPredicted RBP12.02□□□□□ -0.49
CEACAM1-213ENST00000599389 MED14O60244 1454 aa12.01□□□□□ -0.49
CEACAM1-213ENST00000599389 ARHGAP35Q9NRY4 1499 aa12.01□□□□□ -0.49
CEACAM1-213ENST00000599389 A2MP01023 1474 aa11.99□□□□□ -0.49
CEACAM1-213ENST00000599389 ADGBQ8N7X0 1667 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms