RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 AKNAQ7Z591 1439 aa19.03■□□□□ 0.64
ARHGEF1-216ENST00000598587 COL17A1Q9UMD9 1497 aaPredicted RBP19.03■□□□□ 0.64
ARHGEF1-216ENST00000598587 ADGRL1O94910 1474 aa19.01■□□□□ 0.63
ARHGEF1-216ENST00000598587 FRMPD1Q5SYB0 1578 aa19■□□□□ 0.63
ARHGEF1-216ENST00000598587 DENND4BO75064 1496 aaPredicted RBP18.99■□□□□ 0.63
ARHGEF1-216ENST00000598587 APLP2Q06481 763 aa18.99■□□□□ 0.63
ARHGEF1-216ENST00000598587 EFCAB2Q5VUJ9 269 aa18.99■□□□□ 0.63
ARHGEF1-216ENST00000598587 LRRC9Q6ZRR7 1453 aa18.97■□□□□ 0.63
ARHGEF1-216ENST00000598587 CCNB3Q8WWL7 1395 aa18.97■□□□□ 0.63
ARHGEF1-216ENST00000598587 ABCC1P33527 1531 aa18.95■□□□□ 0.62
ARHGEF1-216ENST00000598587 ZMYM4Q5VZL5 1548 aa18.95■□□□□ 0.62
ARHGEF1-216ENST00000598587 GPATCH8Q9UKJ3 1502 aaKnown RBP18.94■□□□□ 0.62
ARHGEF1-216ENST00000598587 POGZQ7Z3K3 1410 aa18.93■□□□□ 0.62
ARHGEF1-216ENST00000598587 NCOA2Q15596 1464 aa18.93■□□□□ 0.62
ARHGEF1-216ENST00000598587 SCAPERQ9BY12 1400 aa18.92■□□□□ 0.62
ARHGEF1-216ENST00000598587 ZNF518AQ6AHZ1 1483 aa18.92■□□□□ 0.62
ARHGEF1-216ENST00000598587 SAMD9LQ8IVG5 1584 aa18.92■□□□□ 0.62
ARHGEF1-216ENST00000598587 ARHGEF40Q8TER5 1519 aa18.91■□□□□ 0.62
ARHGEF1-216ENST00000598587 PLEKHH2Q8IVE3 1493 aa18.9■□□□□ 0.62
ARHGEF1-216ENST00000598587 RAPGEF3O95398 923 aa18.89■□□□□ 0.61
ARHGEF1-216ENST00000598587 MAGI2Q86UL8 1455 aa18.89■□□□□ 0.61
ARHGEF1-216ENST00000598587 KDM5CP41229 1560 aa18.89■□□□□ 0.61
ARHGEF1-216ENST00000598587 ZFYVE16Q7Z3T8 1539 aa18.88■□□□□ 0.61
ARHGEF1-216ENST00000598587 HECW2Q9P2P5 1572 aa18.88■□□□□ 0.61
ARHGEF1-216ENST00000598587 SYCP2Q9BX26 1530 aa18.87■□□□□ 0.61
ARHGEF1-216ENST00000598587 CFDP1Q9UEE9 299 aaPredicted RBP18.87■□□□□ 0.61
ARHGEF1-216ENST00000598587 ZNF777Q9ULD5 760 aaPredicted RBP18.84■□□□□ 0.61
ARHGEF1-216ENST00000598587 KIAA1107Q9UPP5 1409 aa18.83■□□□□ 0.6
ARHGEF1-216ENST00000598587 KANK4Q5T7N3 995 aaPredicted RBP18.81■□□□□ 0.6
ARHGEF1-216ENST00000598587 CAMSAP2Q08AD1 1489 aa18.81■□□□□ 0.6
ARHGEF1-216ENST00000598587 MYOM3Q5VTT5 1437 aa18.8■□□□□ 0.6
ARHGEF1-216ENST00000598587 ARHGEF12Q9NZN5 1544 aa18.79■□□□□ 0.6
ARHGEF1-216ENST00000598587 KIDINS220Q9ULH0 1771 aa18.78■□□□□ 0.6
ARHGEF1-216ENST00000598587 MLH3Q9UHC1 1453 aa18.77■□□□□ 0.6
ARHGEF1-216ENST00000598587 MIA2Q96PC5 1412 aa18.77■□□□□ 0.6
ARHGEF1-216ENST00000598587 TRAPPC8Q9Y2L5 1435 aa18.77■□□□□ 0.6
ARHGEF1-216ENST00000598587 ABCA6Q8N139 1617 aa18.77■□□□□ 0.6
ARHGEF1-216ENST00000598587 INO80Q9ULG1 1556 aaPredicted RBP18.76■□□□□ 0.59
ARHGEF1-216ENST00000598587 DIP2CQ9Y2E4 1556 aa18.76■□□□□ 0.59
ARHGEF1-216ENST00000598587 MYT1LQ9UL68 1186 aa18.76■□□□□ 0.59
ARHGEF1-216ENST00000598587 ARHGEF5Q12774 1597 aa18.76■□□□□ 0.59
ARHGEF1-216ENST00000598587 YEATS2Q9ULM3 1422 aa18.75■□□□□ 0.59
ARHGEF1-216ENST00000598587 ATP7AQ04656 1500 aa18.75■□□□□ 0.59
ARHGEF1-216ENST00000598587 BCORL1Q5H9F3 1711 aa18.75■□□□□ 0.59
ARHGEF1-216ENST00000598587 C9orf84Q5VXU9 1444 aa18.74■□□□□ 0.59
ARHGEF1-216ENST00000598587 ADGBQ8N7X0 1667 aa18.74■□□□□ 0.59
ARHGEF1-216ENST00000598587 REREQ9P2R6 1566 aa18.74■□□□□ 0.59
ARHGEF1-216ENST00000598587 ATP10AO60312 1499 aa18.74■□□□□ 0.59
ARHGEF1-216ENST00000598587 AFAP1Q8N556 730 aa18.74■□□□□ 0.59
ARHGEF1-216ENST00000598587 PTPN23Q9H3S7 1636 aa18.74■□□□□ 0.59
ARHGEF1-216ENST00000598587 CCDC141Q6ZP82 1450 aa18.73■□□□□ 0.59
ARHGEF1-216ENST00000598587 HNRNPMP52272 730 aaKnown RBP eCLIP18.72■□□□□ 0.59
ARHGEF1-216ENST00000598587 CROCC2H7BZ55 1655 aa18.71■□□□□ 0.59
ARHGEF1-216ENST00000598587 SPAG9O60271 1321 aaKnown RBP18.71■□□□□ 0.59
ARHGEF1-216ENST00000598587 MBD5Q9P267 1494 aa18.71■□□□□ 0.59
ARHGEF1-216ENST00000598587 SIGLEC1Q9BZZ2 1709 aa18.7■□□□□ 0.58
ARHGEF1-216ENST00000598587 ARID4BQ4LE39 1312 aaPredicted RBP18.7■□□□□ 0.58
ARHGEF1-216ENST00000598587 ZNF644Q9H582 1327 aaPredicted RBP18.7■□□□□ 0.58
ARHGEF1-216ENST00000598587 RSPH4AQ5TD94 716 aa18.69■□□□□ 0.58
ARHGEF1-216ENST00000598587 ADAMTSL3P82987 1691 aa18.69■□□□□ 0.58
ARHGEF1-216ENST00000598587 FGD6Q6ZV73 1430 aa18.68■□□□□ 0.58
ARHGEF1-216ENST00000598587 AEBP2Q6ZN18 517 aaPredicted RBP18.68■□□□□ 0.58
ARHGEF1-216ENST00000598587 FER1L4A9Z1Z3 1794 aa18.68■□□□□ 0.58
ARHGEF1-216ENST00000598587 MAST1Q9Y2H9 1570 aa18.66■□□□□ 0.58
ARHGEF1-216ENST00000598587 RTEL1-TNFRSF6BF6WH68 1400 aa18.66■□□□□ 0.58
ARHGEF1-216ENST00000598587 DNMT1P26358 1616 aaKnown RBP18.65■□□□□ 0.58
ARHGEF1-216ENST00000598587 TCOF1Q13428 1488 aaKnown RBP18.65■□□□□ 0.58
ARHGEF1-216ENST00000598587 MADDQ8WXG6 1647 aa18.64■□□□□ 0.57
ARHGEF1-216ENST00000598587 AGLP35573 1532 aa18.64■□□□□ 0.57
ARHGEF1-216ENST00000598587 KDM4FA0A1W2PPD8 638 aa18.63■□□□□ 0.57
ARHGEF1-216ENST00000598587 PLXNC1O60486 1568 aa18.63■□□□□ 0.57
ARHGEF1-216ENST00000598587 RIMS1Q86UR5 1692 aaKnown RBP18.63■□□□□ 0.57
ARHGEF1-216ENST00000598587 TSPY4P0CV99 314 aa18.61■□□□□ 0.57
ARHGEF1-216ENST00000598587 TSPY10P0CW01 314 aa18.61■□□□□ 0.57
ARHGEF1-216ENST00000598587 A2MP01023 1474 aa18.6■□□□□ 0.57
ARHGEF1-216ENST00000598587 SHANK2Q9UPX8 1470 aa18.6■□□□□ 0.57
ARHGEF1-216ENST00000598587 DAPK1P53355 1430 aa18.56■□□□□ 0.56
ARHGEF1-216ENST00000598587 EIF2AK4Q9P2K8 1649 aaKnown RBP18.55■□□□□ 0.56
ARHGEF1-216ENST00000598587 PTPRMP28827 1452 aa18.52■□□□□ 0.56
ARHGEF1-216ENST00000598587 ABCC5O15440 1437 aa18.52■□□□□ 0.56
ARHGEF1-216ENST00000598587 MLECQ14165 292 aa18.52■□□□□ 0.56
ARHGEF1-216ENST00000598587 FAM50AQ14320 339 aaKnown RBP18.52■□□□□ 0.56
ARHGEF1-216ENST00000598587 MROH2AA6NES4 1674 aa18.52■□□□□ 0.56
ARHGEF1-216ENST00000598587 DHX29Q7Z478 1369 aaKnown RBP18.51■□□□□ 0.55
ARHGEF1-216ENST00000598587 DUOX2Q9NRD8 1548 aa18.5■□□□□ 0.55
ARHGEF1-216ENST00000598587 PPARGC1BQ86YN6 1023 aaKnown RBP18.5■□□□□ 0.55
ARHGEF1-216ENST00000598587 ESF1Q9H501 851 aaKnown RBP18.49■□□□□ 0.55
ARHGEF1-216ENST00000598587 FAM135AQ9P2D6 1515 aa18.49■□□□□ 0.55
ARHGEF1-216ENST00000598587 CLTCQ00610 1675 aaKnown RBP18.48■□□□□ 0.55
ARHGEF1-216ENST00000598587 RNF17Q9BXT8 1623 aaKnown RBP18.48■□□□□ 0.55
ARHGEF1-216ENST00000598587 CNTLNQ9NXG0 1405 aa18.48■□□□□ 0.55
ARHGEF1-216ENST00000598587 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.47■□□□□ 0.55
ARHGEF1-216ENST00000598587 C3P01024 1663 aa18.47■□□□□ 0.55
ARHGEF1-216ENST00000598587 ANKRD30AQ9BXX3 1397 aa18.46■□□□□ 0.55
ARHGEF1-216ENST00000598587 ZC3H13Q5T200 1668 aaKnown RBP18.46■□□□□ 0.55
ARHGEF1-216ENST00000598587 ADGRL2O95490 1459 aa18.46■□□□□ 0.54
ARHGEF1-216ENST00000598587 ERBINQ96RT1 1412 aa18.45■□□□□ 0.54
ARHGEF1-216ENST00000598587 KIF15Q9NS87 1388 aa18.44■□□□□ 0.54
ARHGEF1-216ENST00000598587 RRBP1Q9P2E9 1410 aaKnown RBP18.44■□□□□ 0.54
ARHGEF1-216ENST00000598587 PREX1Q8TCU6 1659 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms