RNA–Protein interactions for RNA: ENST00000598485.6

C19orf54-209, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 5 BASIC

Gene C19orf54, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-209ENST00000598485 LRRIQ1Q96JM4 1722 aa17.99■□□□□ 0.47
C19orf54-209ENST00000598485 PLPPR3Q6T4P5 718 aa17.99■□□□□ 0.47
C19orf54-209ENST00000598485 MLECQ14165 292 aa17.98■□□□□ 0.47
C19orf54-209ENST00000598485 ZFYVE16Q7Z3T8 1539 aa17.96■□□□□ 0.47
C19orf54-209ENST00000598485 ARHGEF40Q8TER5 1519 aa17.95■□□□□ 0.46
C19orf54-209ENST00000598485 POGZQ7Z3K3 1410 aa17.95■□□□□ 0.46
C19orf54-209ENST00000598485 FYCO1Q9BQS8 1478 aa17.95■□□□□ 0.46
C19orf54-209ENST00000598485 ZNF777Q9ULD5 760 aaPredicted RBP17.94■□□□□ 0.46
C19orf54-209ENST00000598485 YEATS2Q9ULM3 1422 aa17.94■□□□□ 0.46
C19orf54-209ENST00000598485 HECW2Q9P2P5 1572 aa17.94■□□□□ 0.46
C19orf54-209ENST00000598485 BCORL1Q5H9F3 1711 aa17.93■□□□□ 0.46
C19orf54-209ENST00000598485 AFAP1Q8N556 730 aa17.93■□□□□ 0.46
C19orf54-209ENST00000598485 PTPRMP28827 1452 aa17.93■□□□□ 0.46
C19orf54-209ENST00000598485 MAGI2Q86UL8 1455 aa17.93■□□□□ 0.46
C19orf54-209ENST00000598485 ADAMTSL3P82987 1691 aa17.93■□□□□ 0.46
C19orf54-209ENST00000598485 ZMYM4Q5VZL5 1548 aa17.92■□□□□ 0.46
C19orf54-209ENST00000598485 MADDQ8WXG6 1647 aa17.9■□□□□ 0.46
C19orf54-209ENST00000598485 ZNF518AQ6AHZ1 1483 aa17.88■□□□□ 0.45
C19orf54-209ENST00000598485 CDC42BPBQ9Y5S2 1711 aa17.88■□□□□ 0.45
C19orf54-209ENST00000598485 ATP10AO60312 1499 aa17.88■□□□□ 0.45
C19orf54-209ENST00000598485 MTUS2Q5JR59 1369 aa17.87■□□□□ 0.45
C19orf54-209ENST00000598485 RIMS1Q86UR5 1692 aaKnown RBP17.87■□□□□ 0.45
C19orf54-209ENST00000598485 PREX2Q70Z35 1606 aa17.84■□□□□ 0.45
C19orf54-209ENST00000598485 C9orf84Q5VXU9 1444 aa17.84■□□□□ 0.45
C19orf54-209ENST00000598485 CFDP1Q9UEE9 299 aaPredicted RBP17.83■□□□□ 0.44
C19orf54-209ENST00000598485 VPS8Q8N3P4 1428 aa17.82■□□□□ 0.44
C19orf54-209ENST00000598485 CCNB3Q8WWL7 1395 aa17.82■□□□□ 0.44
C19orf54-209ENST00000598485 CDC42BPAQ5VT25 1732 aa17.81■□□□□ 0.44
C19orf54-209ENST00000598485 ESF1Q9H501 851 aaKnown RBP17.81■□□□□ 0.44
C19orf54-209ENST00000598485 TRAPPC8Q9Y2L5 1435 aa17.81■□□□□ 0.44
C19orf54-209ENST00000598485 HNRNPMP52272 730 aaKnown RBP eCLIP17.8■□□□□ 0.44
C19orf54-209ENST00000598485 SIGLEC1Q9BZZ2 1709 aa17.8■□□□□ 0.44
C19orf54-209ENST00000598485 FER1L4A9Z1Z3 1794 aa17.78■□□□□ 0.44
C19orf54-209ENST00000598485 KDM5CP41229 1560 aa17.78■□□□□ 0.44
C19orf54-209ENST00000598485 ABCC1P33527 1531 aa17.77■□□□□ 0.44
C19orf54-209ENST00000598485 GPATCH8Q9UKJ3 1502 aaKnown RBP17.77■□□□□ 0.44
C19orf54-209ENST00000598485 ARHGEF12Q9NZN5 1544 aa17.77■□□□□ 0.43
C19orf54-209ENST00000598485 ITSN2Q9NZM3 1697 aa17.77■□□□□ 0.43
C19orf54-209ENST00000598485 SPAG9O60271 1321 aaKnown RBP17.76■□□□□ 0.43
C19orf54-209ENST00000598485 MLH3Q9UHC1 1453 aa17.75■□□□□ 0.43
C19orf54-209ENST00000598485 CEBPAP49715 358 aaPredicted RBP17.75■□□□□ 0.43
C19orf54-209ENST00000598485 HSPA2P54652 639 aa17.74■□□□□ 0.43
C19orf54-209ENST00000598485 DIP2CQ9Y2E4 1556 aa17.74■□□□□ 0.43
C19orf54-209ENST00000598485 ILDR1Q86SU0 546 aaPredicted RBP17.73■□□□□ 0.43
C19orf54-209ENST00000598485 SYCP2Q9BX26 1530 aa17.72■□□□□ 0.43
C19orf54-209ENST00000598485 SAMD9LQ8IVG5 1584 aa17.72■□□□□ 0.43
C19orf54-209ENST00000598485 PLEKHH2Q8IVE3 1493 aa17.72■□□□□ 0.43
C19orf54-209ENST00000598485 ABCA6Q8N139 1617 aa17.72■□□□□ 0.43
C19orf54-209ENST00000598485 EHBP1L1Q8N3D4 1523 aa17.71■□□□□ 0.43
C19orf54-209ENST00000598485 LMTK3Q96Q04 1460 aa17.69■□□□□ 0.42
C19orf54-209ENST00000598485 ZNF644Q9H582 1327 aaPredicted RBP17.69■□□□□ 0.42
C19orf54-209ENST00000598485 KIDINS220Q9ULH0 1771 aa17.68■□□□□ 0.42
C19orf54-209ENST00000598485 KIAA1107Q9UPP5 1409 aa17.68■□□□□ 0.42
C19orf54-209ENST00000598485 REREQ9P2R6 1566 aa17.66■□□□□ 0.42
C19orf54-209ENST00000598485 APLP2Q06481 763 aa17.65■□□□□ 0.42
C19orf54-209ENST00000598485 MAP3K1Q13233 1512 aa17.65■□□□□ 0.42
C19orf54-209ENST00000598485 TIAM1Q13009 1591 aa17.65■□□□□ 0.42
C19orf54-209ENST00000598485 AGLP35573 1532 aa17.64■□□□□ 0.41
C19orf54-209ENST00000598485 SUPT6HQ7KZ85 1726 aaKnown RBP17.64■□□□□ 0.41
C19orf54-209ENST00000598485 ATP7AQ04656 1500 aa17.63■□□□□ 0.41
C19orf54-209ENST00000598485 GGT6Q6P531 493 aa17.63■□□□□ 0.41
C19orf54-209ENST00000598485 NCOA2Q15596 1464 aa17.62■□□□□ 0.41
C19orf54-209ENST00000598485 UHRF1BP1Q6BDS2 1440 aa17.6■□□□□ 0.41
C19orf54-209ENST00000598485 A2MP01023 1474 aa17.6■□□□□ 0.41
C19orf54-209ENST00000598485 PREX1Q8TCU6 1659 aa17.59■□□□□ 0.41
C19orf54-209ENST00000598485 SETD1BQ9UPS6 1966 aaKnown RBP17.59■□□□□ 0.41
C19orf54-209ENST00000598485 CNTLNQ9NXG0 1405 aa17.58■□□□□ 0.41
C19orf54-209ENST00000598485 TSPY4P0CV99 314 aa17.58■□□□□ 0.4
C19orf54-209ENST00000598485 TSPY10P0CW01 314 aa17.58■□□□□ 0.4
C19orf54-209ENST00000598485 RSPH4AQ5TD94 716 aa17.58■□□□□ 0.4
C19orf54-209ENST00000598485 C3P01024 1663 aa17.57■□□□□ 0.4
C19orf54-209ENST00000598485 INO80Q9ULG1 1556 aaPredicted RBP17.57■□□□□ 0.4
C19orf54-209ENST00000598485 KANK4Q5T7N3 995 aaPredicted RBP17.56■□□□□ 0.4
C19orf54-209ENST00000598485 LRRC9Q6ZRR7 1453 aa17.56■□□□□ 0.4
C19orf54-209ENST00000598485 CAMSAP2Q08AD1 1489 aa17.55■□□□□ 0.4
C19orf54-209ENST00000598485 MBD5Q9P267 1494 aa17.55■□□□□ 0.4
C19orf54-209ENST00000598485 ZMYM3Q14202 1370 aa17.54■□□□□ 0.4
C19orf54-209ENST00000598485 DMRT2Q9Y5R5 561 aa17.54■□□□□ 0.4
C19orf54-209ENST00000598485 ADGBQ8N7X0 1667 aa17.54■□□□□ 0.4
C19orf54-209ENST00000598485 CCDC141Q6ZP82 1450 aa17.53■□□□□ 0.4
C19orf54-209ENST00000598485 KIF3BO15066 747 aa17.53■□□□□ 0.4
C19orf54-209ENST00000598485 FBXO41Q8TF61 875 aa17.53■□□□□ 0.4
C19orf54-209ENST00000598485 RTEL1-TNFRSF6BF6WH68 1400 aa17.53■□□□□ 0.4
C19orf54-209ENST00000598485 PPP6R1Q9UPN7 881 aa17.51■□□□□ 0.39
C19orf54-209ENST00000598485 DHX29Q7Z478 1369 aaKnown RBP17.51■□□□□ 0.39
C19orf54-209ENST00000598485 CLTCQ00610 1675 aaKnown RBP17.5■□□□□ 0.39
C19orf54-209ENST00000598485 PLXNC1O60486 1568 aa17.49■□□□□ 0.39
C19orf54-209ENST00000598485 MROH2AA6NES4 1674 aa17.48■□□□□ 0.39
C19orf54-209ENST00000598485 CERKQ8TCT0 537 aa17.46■□□□□ 0.39
C19orf54-209ENST00000598485 NPATQ14207 1427 aa17.46■□□□□ 0.39
C19orf54-209ENST00000598485 WASHC2CQ9Y4E1 1318 aa17.46■□□□□ 0.38
C19orf54-209ENST00000598485 MYOM3Q5VTT5 1437 aa17.45■□□□□ 0.38
C19orf54-209ENST00000598485 ARHGEF5Q12774 1597 aa17.44■□□□□ 0.38
C19orf54-209ENST00000598485 MIA2Q96PC5 1412 aa17.42■□□□□ 0.38
C19orf54-209ENST00000598485 STRCQ7RTU9 1775 aa17.42■□□□□ 0.38
C19orf54-209ENST00000598485 PTPRKQ15262 1439 aa17.4■□□□□ 0.38
C19orf54-209ENST00000598485 NCKAP5LQ9HCH0 1330 aa17.39■□□□□ 0.37
C19orf54-209ENST00000598485 FBXO31Q5XUX0 539 aaPredicted RBP17.38■□□□□ 0.37
C19orf54-209ENST00000598485 CAMSAP1Q5T5Y3 1602 aa17.38■□□□□ 0.37
C19orf54-209ENST00000598485 PTPRTO14522 1441 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms