RNA–Protein interactions for RNA: ENST00000593609.1

ARHGEF1-205, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-205ENST00000593609 CFDP1Q9UEE9 299 aaPredicted RBP29.05■■■□□ 2.24
ARHGEF1-205ENST00000593609 ARHGAP5Q13017 1502 aa29.04■■■□□ 2.24
ARHGEF1-205ENST00000593609 EFCAB2Q5VUJ9 269 aa29.04■■■□□ 2.24
ARHGEF1-205ENST00000593609 FGD6Q6ZV73 1430 aa29.03■■■□□ 2.24
ARHGEF1-205ENST00000593609 CDC42BPBQ9Y5S2 1711 aa29.02■■■□□ 2.24
ARHGEF1-205ENST00000593609 FANCAO15360 1455 aa29.02■■■□□ 2.24
ARHGEF1-205ENST00000593609 NEO1Q92859 1461 aa29.02■■■□□ 2.24
ARHGEF1-205ENST00000593609 CFAP74Q9C0B2 1584 aa29.01■■■□□ 2.23
ARHGEF1-205ENST00000593609 PPRC1Q5VV67 1664 aaKnown RBP28.99■■■□□ 2.23
ARHGEF1-205ENST00000593609 PLEKHH2Q8IVE3 1493 aa28.95■■■□□ 2.22
ARHGEF1-205ENST00000593609 RRBP1Q9P2E9 1410 aaKnown RBP28.94■■■□□ 2.22
ARHGEF1-205ENST00000593609 TCOF1Q13428 1488 aaKnown RBP28.93■■■□□ 2.22
ARHGEF1-205ENST00000593609 AKNAQ7Z591 1439 aa28.93■■■□□ 2.22
ARHGEF1-205ENST00000593609 TSPOAP1O95153 1857 aa28.92■■■□□ 2.22
ARHGEF1-205ENST00000593609 KIAA1107Q9UPP5 1409 aa28.92■■■□□ 2.22
ARHGEF1-205ENST00000593609 SAMD9LQ8IVG5 1584 aa28.91■■■□□ 2.22
ARHGEF1-205ENST00000593609 PTPN23Q9H3S7 1636 aa28.91■■■□□ 2.22
ARHGEF1-205ENST00000593609 ZNF777Q9ULD5 760 aaPredicted RBP28.9■■■□□ 2.22
ARHGEF1-205ENST00000593609 CAMSAP2Q08AD1 1489 aa28.9■■■□□ 2.22
ARHGEF1-205ENST00000593609 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.89■■■□□ 2.22
ARHGEF1-205ENST00000593609 ABCC1P33527 1531 aa28.88■■■□□ 2.21
ARHGEF1-205ENST00000593609 ADGRL1O94910 1474 aa28.87■■■□□ 2.21
ARHGEF1-205ENST00000593609 ZNF644Q9H582 1327 aaPredicted RBP28.86■■■□□ 2.21
ARHGEF1-205ENST00000593609 SCAPERQ9BY12 1400 aa28.83■■■□□ 2.21
ARHGEF1-205ENST00000593609 SYCP2Q9BX26 1530 aa28.81■■■□□ 2.2
ARHGEF1-205ENST00000593609 MBD5Q9P267 1494 aa28.8■■■□□ 2.2
ARHGEF1-205ENST00000593609 RSPH4AQ5TD94 716 aa28.8■■■□□ 2.2
ARHGEF1-205ENST00000593609 ARHGEF5Q12774 1597 aa28.79■■■□□ 2.2
ARHGEF1-205ENST00000593609 ARHGEF12Q9NZN5 1544 aa28.79■■■□□ 2.2
ARHGEF1-205ENST00000593609 DENND4BO75064 1496 aaPredicted RBP28.79■■■□□ 2.2
ARHGEF1-205ENST00000593609 FAM50AQ14320 339 aaKnown RBP28.79■■■□□ 2.2
ARHGEF1-205ENST00000593609 POGZQ7Z3K3 1410 aa28.76■■■□□ 2.19
ARHGEF1-205ENST00000593609 ZNF518AQ6AHZ1 1483 aa28.75■■■□□ 2.19
ARHGEF1-205ENST00000593609 HNRNPMP52272 730 aaKnown RBP eCLIP28.75■■■□□ 2.19
ARHGEF1-205ENST00000593609 CCDC141Q6ZP82 1450 aa28.74■■■□□ 2.19
ARHGEF1-205ENST00000593609 DNMT1P26358 1616 aaKnown RBP28.72■■■□□ 2.19
ARHGEF1-205ENST00000593609 TRAPPC8Q9Y2L5 1435 aa28.72■■■□□ 2.19
ARHGEF1-205ENST00000593609 COL17A1Q9UMD9 1497 aaPredicted RBP28.7■■■□□ 2.18
ARHGEF1-205ENST00000593609 DAPK1P53355 1430 aa28.69■■■□□ 2.18
ARHGEF1-205ENST00000593609 ABCC5O15440 1437 aa28.69■■■□□ 2.18
ARHGEF1-205ENST00000593609 KDM5CP41229 1560 aa28.68■■■□□ 2.18
ARHGEF1-205ENST00000593609 SHANK2Q9UPX8 1470 aa28.68■■■□□ 2.18
ARHGEF1-205ENST00000593609 KDM6BO15054 1643 aa28.68■■■□□ 2.18
ARHGEF1-205ENST00000593609 RICTORQ6R327 1708 aa28.67■■■□□ 2.18
ARHGEF1-205ENST00000593609 AFAP1Q8N556 730 aa28.66■■■□□ 2.18
ARHGEF1-205ENST00000593609 FRMPD1Q5SYB0 1578 aa28.66■■■□□ 2.18
ARHGEF1-205ENST00000593609 ZMYM4Q5VZL5 1548 aa28.65■■■□□ 2.18
ARHGEF1-205ENST00000593609 RAPGEF3O95398 923 aa28.65■■■□□ 2.18
ARHGEF1-205ENST00000593609 TSPY4P0CV99 314 aa28.64■■■□□ 2.18
ARHGEF1-205ENST00000593609 TSPY10P0CW01 314 aa28.64■■■□□ 2.18
ARHGEF1-205ENST00000593609 MAST1Q9Y2H9 1570 aa28.62■■■□□ 2.17
ARHGEF1-205ENST00000593609 RTEL1-TNFRSF6BF6WH68 1400 aa28.62■■■□□ 2.17
ARHGEF1-205ENST00000593609 CROCC2H7BZ55 1655 aa28.62■■■□□ 2.17
ARHGEF1-205ENST00000593609 MLH3Q9UHC1 1453 aa28.62■■■□□ 2.17
ARHGEF1-205ENST00000593609 TRIM26Q12899 539 aaPredicted RBP28.62■■■□□ 2.17
ARHGEF1-205ENST00000593609 SPAG9O60271 1321 aaKnown RBP28.61■■■□□ 2.17
ARHGEF1-205ENST00000593609 C9orf84Q5VXU9 1444 aa28.6■■■□□ 2.17
ARHGEF1-205ENST00000593609 MAGI2Q86UL8 1455 aa28.6■■■□□ 2.17
ARHGEF1-205ENST00000593609 HECW2Q9P2P5 1572 aa28.58■■■□□ 2.17
ARHGEF1-205ENST00000593609 INO80Q9ULG1 1556 aaPredicted RBP28.58■■■□□ 2.17
ARHGEF1-205ENST00000593609 PTPRKQ15262 1439 aa28.57■■■□□ 2.16
ARHGEF1-205ENST00000593609 ZFYVE16Q7Z3T8 1539 aa28.57■■■□□ 2.16
ARHGEF1-205ENST00000593609 ATP7AQ04656 1500 aa28.55■■■□□ 2.16
ARHGEF1-205ENST00000593609 ADGRL2O95490 1459 aa28.55■■■□□ 2.16
ARHGEF1-205ENST00000593609 ROCK1Q13464 1354 aa28.54■■■□□ 2.16
ARHGEF1-205ENST00000593609 ITGAEP38570 1179 aa28.53■■■□□ 2.16
ARHGEF1-205ENST00000593609 ANKRD30AQ9BXX3 1397 aa28.51■■■□□ 2.16
ARHGEF1-205ENST00000593609 PLXNC1O60486 1568 aa28.5■■■□□ 2.15
ARHGEF1-205ENST00000593609 KIDINS220Q9ULH0 1771 aa28.5■■■□□ 2.15
ARHGEF1-205ENST00000593609 ADGBQ8N7X0 1667 aa28.49■■■□□ 2.15
ARHGEF1-205ENST00000593609 NCOA1Q15788 1441 aa28.49■■■□□ 2.15
ARHGEF1-205ENST00000593609 CHIC2Q9UKJ5 165 aa28.47■■■□□ 2.15
ARHGEF1-205ENST00000593609 MYT1LQ9UL68 1186 aa28.46■■■□□ 2.15
ARHGEF1-205ENST00000593609 ARHGEF40Q8TER5 1519 aa28.45■■■□□ 2.15
ARHGEF1-205ENST00000593609 YEATS2Q9ULM3 1422 aa28.44■■■□□ 2.14
ARHGEF1-205ENST00000593609 DIP2CQ9Y2E4 1556 aa28.43■■■□□ 2.14
ARHGEF1-205ENST00000593609 KIF15Q9NS87 1388 aa28.42■■■□□ 2.14
ARHGEF1-205ENST00000593609 ABCA6Q8N139 1617 aa28.42■■■□□ 2.14
ARHGEF1-205ENST00000593609 ATP10AO60312 1499 aa28.4■■■□□ 2.14
ARHGEF1-205ENST00000593609 HFM1A2PYH4 1435 aa28.4■■■□□ 2.14
ARHGEF1-205ENST00000593609 DUOX2Q9NRD8 1548 aa28.39■■■□□ 2.14
ARHGEF1-205ENST00000593609 REREQ9P2R6 1566 aa28.39■■■□□ 2.14
ARHGEF1-205ENST00000593609 RRP7BPQ9NSQ0 103 aa28.37■■■□□ 2.13
ARHGEF1-205ENST00000593609 A2MP01023 1474 aa28.37■■■□□ 2.13
ARHGEF1-205ENST00000593609 DHX29Q7Z478 1369 aaKnown RBP28.37■■■□□ 2.13
ARHGEF1-205ENST00000593609 NAIPQ13075 1403 aa28.35■■■□□ 2.13
ARHGEF1-205ENST00000593609 ERBINQ96RT1 1412 aa28.34■■■□□ 2.13
ARHGEF1-205ENST00000593609 ANKRD50Q9ULJ7 1429 aa28.31■■■□□ 2.12
ARHGEF1-205ENST00000593609 GCC2Q8IWJ2 1684 aa28.31■■■□□ 2.12
ARHGEF1-205ENST00000593609 AGLP35573 1532 aa28.29■■■□□ 2.12
ARHGEF1-205ENST00000593609 SETD5Q9C0A6 1442 aa28.27■■■□□ 2.12
ARHGEF1-205ENST00000593609 EIF2AK4Q9P2K8 1649 aaKnown RBP28.27■■■□□ 2.12
ARHGEF1-205ENST00000593609 PCGF6Q9BYE7 350 aa28.25■■■□□ 2.11
ARHGEF1-205ENST00000593609 BCORL1Q5H9F3 1711 aa28.23■■■□□ 2.11
ARHGEF1-205ENST00000593609 ACIN1Q9UKV3 1341 aaKnown RBP28.22■■■□□ 2.11
ARHGEF1-205ENST00000593609 HRCP23327 699 aa28.2■■■□□ 2.1
ARHGEF1-205ENST00000593609 KIF3BO15066 747 aa28.17■■■□□ 2.1
ARHGEF1-205ENST00000593609 RAB3GAP2Q9H2M9 1393 aa28.16■■■□□ 2.1
ARHGEF1-205ENST00000593609 RNF17Q9BXT8 1623 aaKnown RBP28.15■■■□□ 2.1
ARHGEF1-205ENST00000593609 SIGLEC1Q9BZZ2 1709 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms