RNA–Protein interactions for RNA: ENST00000593548.1

FARP1-208, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-208ENST00000593548 TMEM92Q6UXU6 159 aa13.08□□□□□ -0.32
FARP1-208ENST00000593548 C2orf72A6NCS6 295 aa13.03□□□□□ -0.32
FARP1-208ENST00000593548 PLCB2Q00722 1185 aa13.02□□□□□ -0.33
FARP1-208ENST00000593548 CADPS2Q86UW7 1296 aa12.99□□□□□ -0.33
FARP1-208ENST00000593548 SNPHO15079 494 aa12.98□□□□□ -0.33
FARP1-208ENST00000593548 PDE4AP27815 886 aa12.97□□□□□ -0.33
FARP1-208ENST00000593548 FAM163AQ96GL9 167 aaPredicted RBP12.97□□□□□ -0.33
FARP1-208ENST00000593548 POTEMA6NI47 508 aa12.96□□□□□ -0.33
FARP1-208ENST00000593548 GPHNQ9NQX3 736 aaPredicted RBP12.96□□□□□ -0.33
FARP1-208ENST00000593548 KIF3CO14782 793 aa12.95□□□□□ -0.34
FARP1-208ENST00000593548 LARP6Q9BRS8 491 aaKnown RBP12.95□□□□□ -0.34
FARP1-208ENST00000593548 NCKAP5LQ9HCH0 1330 aa12.94□□□□□ -0.34
FARP1-208ENST00000593548 TSHZ2Q9NRE2 1034 aa12.94□□□□□ -0.34
FARP1-208ENST00000593548 HAP1P54257 671 aaPredicted RBP12.93□□□□□ -0.34
FARP1-208ENST00000593548 CRISPLD2Q9H0B8 497 aa12.93□□□□□ -0.34
FARP1-208ENST00000593548 ZNF710Q8N1W2 664 aa12.92□□□□□ -0.34
FARP1-208ENST00000593548 DSG2Q14126 1118 aa12.91□□□□□ -0.34
FARP1-208ENST00000593548 DOK7Q18PE1 504 aa12.91□□□□□ -0.34
FARP1-208ENST00000593548 POTEGQ6S5H5 508 aa12.91□□□□□ -0.34
FARP1-208ENST00000593548 PLPP6Q8IY26 295 aa12.9□□□□□ -0.34
FARP1-208ENST00000593548 FOXK1P85037 733 aa12.89□□□□□ -0.35
FARP1-208ENST00000593548 DDX27Q96GQ7 796 aaKnown RBP12.89□□□□□ -0.35
FARP1-208ENST00000593548 RIMBP2O15034 1052 aa12.88□□□□□ -0.35
FARP1-208ENST00000593548 PPP1R15BQ5SWA1 713 aa12.88□□□□□ -0.35
FARP1-208ENST00000593548 HOXB3P14651 431 aaPredicted RBP12.87□□□□□ -0.35
FARP1-208ENST00000593548 ST18O60284 1047 aa12.84□□□□□ -0.35
FARP1-208ENST00000593548 WDR70Q9NW82 654 aa12.84□□□□□ -0.35
FARP1-208ENST00000593548 MFSD10Q14728 455 aa12.8□□□□□ -0.36
FARP1-208ENST00000593548 UPF1Q92900 1129 aaKnown RBP eCLIP12.79□□□□□ -0.36
FARP1-208ENST00000593548 LCE2DQ5TA82 110 aaPredicted RBP12.78□□□□□ -0.36
FARP1-208ENST00000593548 ARSIQ5FYB1 569 aa12.77□□□□□ -0.37
FARP1-208ENST00000593548 MARVELD3Q96A59 401 aa12.76□□□□□ -0.37
FARP1-208ENST00000593548 ZSWIM6Q9HCJ5 1215 aa12.75□□□□□ -0.37
FARP1-208ENST00000593548 KHSRPQ92945 711 aaKnown RBP eCLIP12.74□□□□□ -0.374e-9■■■■■ 32
FARP1-208ENST00000593548 PCDHGA4Q9Y5G9 962 aa12.74□□□□□ -0.37
FARP1-208ENST00000593548 SLC34A2O95436 690 aa12.73□□□□□ -0.37
FARP1-208ENST00000593548 EMP3P54852 163 aa12.73□□□□□ -0.37
FARP1-208ENST00000593548 HOXB1P14653 301 aaPredicted RBP12.72□□□□□ -0.37
FARP1-208ENST00000593548 TBC1D12O60347 775 aa12.71□□□□□ -0.37
FARP1-208ENST00000593548 GPR153Q6NV75 609 aa12.71□□□□□ -0.37
FARP1-208ENST00000593548 NUDT7P0C024 238 aa12.7□□□□□ -0.38
FARP1-208ENST00000593548 PTCD2Q8WV60 388 aaKnown RBP12.69□□□□□ -0.38
FARP1-208ENST00000593548 MAP3K9P80192 1104 aa12.68□□□□□ -0.38
FARP1-208ENST00000593548 E2F4Q16254 413 aa12.68□□□□□ -0.38
FARP1-208ENST00000593548 EMILIN3Q9NT22 766 aa12.68□□□□□ -0.38
FARP1-208ENST00000593548 OXER1Q8TDS5 423 aa12.67□□□□□ -0.38
FARP1-208ENST00000593548 ERBB3P21860 1342 aa12.65□□□□□ -0.38
FARP1-208ENST00000593548 FAM205CA6NFA0 338 aa12.65□□□□□ -0.38
FARP1-208ENST00000593548 PCDH10Q9P2E7 1040 aa12.65□□□□□ -0.38
FARP1-208ENST00000593548 CAMK2BQ13554 666 aa12.64□□□□□ -0.39
FARP1-208ENST00000593548 DPYSL4O14531 572 aa12.63□□□□□ -0.39
FARP1-208ENST00000593548 ZNF316A6NFI3 1004 aaPredicted RBP12.62□□□□□ -0.39
FARP1-208ENST00000593548 KDM2AQ9Y2K7 1162 aa12.6□□□□□ -0.39
FARP1-208ENST00000593548 EVI5O60447 810 aa12.59□□□□□ -0.39
FARP1-208ENST00000593548 VARS2Q5ST30 1063 aaKnown RBP12.59□□□□□ -0.39
FARP1-208ENST00000593548 VSIG10Q8N0Z9 540 aa12.59□□□□□ -0.39
FARP1-208ENST00000593548 LHX6Q9UPM6 363 aa12.59□□□□□ -0.39
FARP1-208ENST00000593548 HS3ST6Q96QI5 342 aa12.58□□□□□ -0.4
FARP1-208ENST00000593548 KCNV2Q8TDN2 545 aa12.56□□□□□ -0.4
FARP1-208ENST00000593548 P3H3Q8IVL6 736 aa12.54□□□□□ -0.4
FARP1-208ENST00000593548 KDM4FA0A1W2PPD8 638 aa12.5□□□□□ -0.41
FARP1-208ENST00000593548 POTEB3A0JP26 581 aa12.5□□□□□ -0.41
FARP1-208ENST00000593548 POTEBQ6S5H4 581 aa12.5□□□□□ -0.41
FARP1-208ENST00000593548 ZNF454Q8N9F8 522 aa12.49□□□□□ -0.41
FARP1-208ENST00000593548 CDAN1Q8IWY9 1227 aa12.48□□□□□ -0.41
FARP1-208ENST00000593548 PSDA5PKW4 1024 aaPredicted RBP12.47□□□□□ -0.41
FARP1-208ENST00000593548 PPP4R3BQ5MIZ7 849 aa12.47□□□□□ -0.41
FARP1-208ENST00000593548 ARHGEF1Q92888 912 aaKnown RBP12.47□□□□□ -0.41
FARP1-208ENST00000593548 SPDYE16A6NNV3 312 aaPredicted RBP12.46□□□□□ -0.41
FARP1-208ENST00000593548 PDIA6Q15084 440 aa12.46□□□□□ -0.41
FARP1-208ENST00000593548 ANO8Q9HCE9 1232 aaPredicted RBP12.46□□□□□ -0.41
FARP1-208ENST00000593548 DDX12PQ92771 950 aa12.45□□□□□ -0.42
FARP1-208ENST00000593548 ARIH1Q9Y4X5 557 aaPredicted RBP12.44□□□□□ -0.42
FARP1-208ENST00000593548 SLC24A1O60721 1099 aa12.43□□□□□ -0.42
FARP1-208ENST00000593548 ZNF687Q8N1G0 1237 aa12.42□□□□□ -0.42
FARP1-208ENST00000593548 JPH4Q96JJ6 628 aa12.42□□□□□ -0.42
FARP1-208ENST00000593548 GRXCR2A6NFK2 248 aa12.41□□□□□ -0.42
FARP1-208ENST00000593548 FOSBP53539 338 aa12.41□□□□□ -0.42
FARP1-208ENST00000593548 NBR1Q14596 966 aa12.38□□□□□ -0.43
FARP1-208ENST00000593548 ZDHHC16Q969W1 377 aa12.38□□□□□ -0.43
FARP1-208ENST00000593548 AXIN2Q9Y2T1 843 aa12.38□□□□□ -0.43
FARP1-208ENST00000593548 PCDHGA10Q9Y5H3 936 aa12.38□□□□□ -0.43
FARP1-208ENST00000593548 PHF14O94880 888 aa12.37□□□□□ -0.43
FARP1-208ENST00000593548 RBM33Q96EV2 1170 aaKnown RBP12.36□□□□□ -0.43
FARP1-208ENST00000593548 KCNH8Q96L42 1107 aa12.36□□□□□ -0.43
FARP1-208ENST00000593548 PTGER2P43116 358 aa12.35□□□□□ -0.43
FARP1-208ENST00000593548 TYW1BQ6NUM6 668 aa12.35□□□□□ -0.43
FARP1-208ENST00000593548 KCNK17Q96T54 332 aa12.35□□□□□ -0.43
FARP1-208ENST00000593548 SEMA3EO15041 775 aa12.33□□□□□ -0.44
FARP1-208ENST00000593548 EPAS1Q99814 870 aa12.33□□□□□ -0.44
FARP1-208ENST00000593548 ADAM33Q9BZ11 813 aa12.33□□□□□ -0.44
FARP1-208ENST00000593548 PBX2P40425 430 aa12.32□□□□□ -0.44
FARP1-208ENST00000593548 MLLT3P42568 568 aaPredicted RBP12.32□□□□□ -0.44
FARP1-208ENST00000593548 PSEN2P49810 448 aa12.32□□□□□ -0.44
FARP1-208ENST00000593548 FBXW7Q969H0 707 aa12.32□□□□□ -0.44
FARP1-208ENST00000593548 KRTAP3-3Q9BYR6 98 aa12.32□□□□□ -0.44
FARP1-208ENST00000593548 KRTAP3-2Q9BYR7 98 aa12.32□□□□□ -0.44
FARP1-208ENST00000593548 ARHGAP33O14559 1287 aa12.31□□□□□ -0.44
FARP1-208ENST00000593548 PTPREP23469 700 aa12.31□□□□□ -0.44
FARP1-208ENST00000593548 MAP3K7O43318 606 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms