RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 CFAP74Q9C0B2 1584 aa24.19■■□□□ 1.46
TRIM47-206ENST00000592942 EHBP1L1Q8N3D4 1523 aa24.19■■□□□ 1.46
TRIM47-206ENST00000592942 DENND4BO75064 1496 aaPredicted RBP24.19■■□□□ 1.46
TRIM47-206ENST00000592942 SCAPERQ9BY12 1400 aa24.18■■□□□ 1.46
TRIM47-206ENST00000592942 FRMPD1Q5SYB0 1578 aa24.17■■□□□ 1.46
TRIM47-206ENST00000592942 ARHGAP5Q13017 1502 aa24.17■■□□□ 1.46
TRIM47-206ENST00000592942 CDC42BPAQ5VT25 1732 aa24.17■■□□□ 1.46
TRIM47-206ENST00000592942 LRRC9Q6ZRR7 1453 aa24.17■■□□□ 1.46
TRIM47-206ENST00000592942 ADGRL1O94910 1474 aa24.16■■□□□ 1.46
TRIM47-206ENST00000592942 PREX2Q70Z35 1606 aa24.16■■□□□ 1.46
TRIM47-206ENST00000592942 CCNB3Q8WWL7 1395 aa24.14■■□□□ 1.45
TRIM47-206ENST00000592942 RICTORQ6R327 1708 aa24.13■■□□□ 1.45
TRIM47-206ENST00000592942 NCOA2Q15596 1464 aa24.11■■□□□ 1.45
TRIM47-206ENST00000592942 ARHGEF12Q9NZN5 1544 aa24.1■■□□□ 1.45
TRIM47-206ENST00000592942 CFDP1Q9UEE9 299 aaPredicted RBP24.1■■□□□ 1.45
TRIM47-206ENST00000592942 AFAP1Q8N556 730 aa24.09■■□□□ 1.45
TRIM47-206ENST00000592942 POGZQ7Z3K3 1410 aa24.09■■□□□ 1.45
TRIM47-206ENST00000592942 ZNF777Q9ULD5 760 aaPredicted RBP24.08■■□□□ 1.45
TRIM47-206ENST00000592942 APLP2Q06481 763 aa24.07■■□□□ 1.44
TRIM47-206ENST00000592942 SUPT6HQ7KZ85 1726 aaKnown RBP24.06■■□□□ 1.44
TRIM47-206ENST00000592942 ZNF644Q9H582 1327 aaPredicted RBP24.06■■□□□ 1.44
TRIM47-206ENST00000592942 TRAPPC8Q9Y2L5 1435 aa24.05■■□□□ 1.44
TRIM47-206ENST00000592942 SAMD9LQ8IVG5 1584 aa24.04■■□□□ 1.44
TRIM47-206ENST00000592942 ILDR1Q86SU0 546 aaPredicted RBP24.04■■□□□ 1.44
TRIM47-206ENST00000592942 ABCC1P33527 1531 aa24.04■■□□□ 1.44
TRIM47-206ENST00000592942 ZMYM4Q5VZL5 1548 aa24.04■■□□□ 1.44
TRIM47-206ENST00000592942 HNRNPMP52272 730 aaKnown RBP eCLIP24.03■■□□□ 1.44
TRIM47-206ENST00000592942 YEATS2Q9ULM3 1422 aa24.01■■□□□ 1.43
TRIM47-206ENST00000592942 KIAA1107Q9UPP5 1409 aa24.01■■□□□ 1.43
TRIM47-206ENST00000592942 ZNF518AQ6AHZ1 1483 aa24■■□□□ 1.43
TRIM47-206ENST00000592942 MAGI2Q86UL8 1455 aa24■■□□□ 1.43
TRIM47-206ENST00000592942 KDM5CP41229 1560 aa23.99■■□□□ 1.43
TRIM47-206ENST00000592942 ITSN2Q9NZM3 1697 aa23.97■■□□□ 1.43
TRIM47-206ENST00000592942 SYCP2Q9BX26 1530 aa23.95■■□□□ 1.43
TRIM47-206ENST00000592942 MBD5Q9P267 1494 aa23.95■■□□□ 1.42
TRIM47-206ENST00000592942 PLEKHH2Q8IVE3 1493 aa23.94■■□□□ 1.42
TRIM47-206ENST00000592942 ZFYVE16Q7Z3T8 1539 aa23.94■■□□□ 1.42
TRIM47-206ENST00000592942 MLH3Q9UHC1 1453 aa23.94■■□□□ 1.42
TRIM47-206ENST00000592942 ARHGEF40Q8TER5 1519 aa23.93■■□□□ 1.42
TRIM47-206ENST00000592942 MYOM3Q5VTT5 1437 aa23.91■■□□□ 1.42
TRIM47-206ENST00000592942 ATP10AO60312 1499 aa23.89■■□□□ 1.42
TRIM47-206ENST00000592942 MIA2Q96PC5 1412 aa23.88■■□□□ 1.41
TRIM47-206ENST00000592942 CAMSAP2Q08AD1 1489 aa23.87■■□□□ 1.41
TRIM47-206ENST00000592942 SIGLEC1Q9BZZ2 1709 aa23.87■■□□□ 1.41
TRIM47-206ENST00000592942 HECW2Q9P2P5 1572 aa23.86■■□□□ 1.41
TRIM47-206ENST00000592942 SPAG9O60271 1321 aaKnown RBP23.86■■□□□ 1.41
TRIM47-206ENST00000592942 KIDINS220Q9ULH0 1771 aa23.86■■□□□ 1.41
TRIM47-206ENST00000592942 MYT1LQ9UL68 1186 aa23.85■■□□□ 1.41
TRIM47-206ENST00000592942 RSPH4AQ5TD94 716 aa23.84■■□□□ 1.41
TRIM47-206ENST00000592942 ARID4BQ4LE39 1312 aaPredicted RBP23.84■■□□□ 1.41
TRIM47-206ENST00000592942 C9orf84Q5VXU9 1444 aa23.83■■□□□ 1.4
TRIM47-206ENST00000592942 DIP2CQ9Y2E4 1556 aa23.82■■□□□ 1.4
TRIM47-206ENST00000592942 ABCA6Q8N139 1617 aa23.81■■□□□ 1.4
TRIM47-206ENST00000592942 PPARGC1BQ86YN6 1023 aaKnown RBP23.81■■□□□ 1.4
TRIM47-206ENST00000592942 FGD6Q6ZV73 1430 aa23.78■■□□□ 1.4
TRIM47-206ENST00000592942 ARHGEF5Q12774 1597 aa23.78■■□□□ 1.4
TRIM47-206ENST00000592942 RTEL1-TNFRSF6BF6WH68 1400 aa23.77■■□□□ 1.4
TRIM47-206ENST00000592942 ADAMTSL3P82987 1691 aa23.77■■□□□ 1.4
TRIM47-206ENST00000592942 CCDC141Q6ZP82 1450 aa23.77■■□□□ 1.4
TRIM47-206ENST00000592942 BCORL1Q5H9F3 1711 aa23.77■■□□□ 1.4
TRIM47-206ENST00000592942 ATP7AQ04656 1500 aa23.77■■□□□ 1.4
TRIM47-206ENST00000592942 INO80Q9ULG1 1556 aaPredicted RBP23.77■■□□□ 1.4
TRIM47-206ENST00000592942 REREQ9P2R6 1566 aa23.76■■□□□ 1.39
TRIM47-206ENST00000592942 TCOF1Q13428 1488 aaKnown RBP23.74■■□□□ 1.39
TRIM47-206ENST00000592942 PTPN23Q9H3S7 1636 aa23.73■■□□□ 1.39
TRIM47-206ENST00000592942 MLECQ14165 292 aa23.73■■□□□ 1.39
TRIM47-206ENST00000592942 TSPY4P0CV99 314 aa23.72■■□□□ 1.39
TRIM47-206ENST00000592942 TSPY10P0CW01 314 aa23.72■■□□□ 1.39
TRIM47-206ENST00000592942 AGLP35573 1532 aa23.71■■□□□ 1.39
TRIM47-206ENST00000592942 ABCC5O15440 1437 aa23.7■■□□□ 1.38
TRIM47-206ENST00000592942 A2MP01023 1474 aa23.68■■□□□ 1.38
TRIM47-206ENST00000592942 DHX29Q7Z478 1369 aaKnown RBP23.66■■□□□ 1.38
TRIM47-206ENST00000592942 MADDQ8WXG6 1647 aa23.66■■□□□ 1.38
TRIM47-206ENST00000592942 PLXNC1O60486 1568 aa23.65■■□□□ 1.38
TRIM47-206ENST00000592942 MAST1Q9Y2H9 1570 aa23.65■■□□□ 1.38
TRIM47-206ENST00000592942 PTPRMP28827 1452 aa23.64■■□□□ 1.38
TRIM47-206ENST00000592942 DAPK1P53355 1430 aa23.63■■□□□ 1.37
TRIM47-206ENST00000592942 FAM50AQ14320 339 aaKnown RBP23.62■■□□□ 1.37
TRIM47-206ENST00000592942 ADGBQ8N7X0 1667 aa23.61■■□□□ 1.37
TRIM47-206ENST00000592942 DNMT1P26358 1616 aaKnown RBP23.6■■□□□ 1.37
TRIM47-206ENST00000592942 RIMS1Q86UR5 1692 aaKnown RBP23.57■■□□□ 1.36
TRIM47-206ENST00000592942 SHANK2Q9UPX8 1470 aa23.57■■□□□ 1.36
TRIM47-206ENST00000592942 CHIC2Q9UKJ5 165 aa23.56■■□□□ 1.36
TRIM47-206ENST00000592942 KIF3BO15066 747 aa23.55■■□□□ 1.36
TRIM47-206ENST00000592942 GGT6Q6P531 493 aa23.55■■□□□ 1.36
TRIM47-206ENST00000592942 PTPRKQ15262 1439 aa23.55■■□□□ 1.36
TRIM47-206ENST00000592942 CROCC2H7BZ55 1655 aa23.54■■□□□ 1.36
TRIM47-206ENST00000592942 RRP7BPQ9NSQ0 103 aa23.54■■□□□ 1.36
TRIM47-206ENST00000592942 FER1L4A9Z1Z3 1794 aa23.54■■□□□ 1.36
TRIM47-206ENST00000592942 CEBPAP49715 358 aaPredicted RBP23.53■■□□□ 1.36
TRIM47-206ENST00000592942 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.52■■□□□ 1.36
TRIM47-206ENST00000592942 NCOA1Q15788 1441 aa23.51■■□□□ 1.35
TRIM47-206ENST00000592942 PPP6R1Q9UPN7 881 aa23.51■■□□□ 1.35
TRIM47-206ENST00000592942 RRBP1Q9P2E9 1410 aaKnown RBP23.5■■□□□ 1.35
TRIM47-206ENST00000592942 KIF15Q9NS87 1388 aa23.5■■□□□ 1.35
TRIM47-206ENST00000592942 PLPPR3Q6T4P5 718 aa23.48■■□□□ 1.35
TRIM47-206ENST00000592942 ANKRD30AQ9BXX3 1397 aa23.48■■□□□ 1.35
TRIM47-206ENST00000592942 ADGRL2O95490 1459 aa23.47■■□□□ 1.35
TRIM47-206ENST00000592942 DUOX2Q9NRD8 1548 aa23.47■■□□□ 1.35
TRIM47-206ENST00000592942 ESF1Q9H501 851 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms