RNA–Protein interactions for RNA: ENST00000592578.5

PSME3-215, Transcript of proteasome activator subunit 3, humanhuman

TSL 4

Gene PSME3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-215ENST00000592578 PREX1Q8TCU6 1659 aa23.67■■□□□ 1.38
PSME3-215ENST00000592578 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.67■■□□□ 1.38
PSME3-215ENST00000592578 RANGAP1P46060 587 aaPredicted RBP23.65■■□□□ 1.38
PSME3-215ENST00000592578 HECW1Q76N89 1606 aa23.65■■□□□ 1.38
PSME3-215ENST00000592578 SCAPERQ9BY12 1400 aa23.62■■□□□ 1.37
PSME3-215ENST00000592578 ILDR2Q71H61 639 aa23.62■■□□□ 1.37
PSME3-215ENST00000592578 ATP10AO60312 1499 aa23.62■■□□□ 1.37
PSME3-215ENST00000592578 C9orf84Q5VXU9 1444 aa23.61■■□□□ 1.37
PSME3-215ENST00000592578 UHRF1BP1Q6BDS2 1440 aa23.59■■□□□ 1.37
PSME3-215ENST00000592578 ARHGEF12Q9NZN5 1544 aa23.59■■□□□ 1.37
PSME3-215ENST00000592578 SIGLEC1Q9BZZ2 1709 aa23.59■■□□□ 1.37
PSME3-215ENST00000592578 SETD1BQ9UPS6 1966 aaKnown RBP23.59■■□□□ 1.37
PSME3-215ENST00000592578 PLCH2O75038 1416 aa23.57■■□□□ 1.36
PSME3-215ENST00000592578 EFCAB2Q5VUJ9 269 aa23.56■■□□□ 1.36
PSME3-215ENST00000592578 MYT1LQ9UL68 1186 aa23.54■■□□□ 1.36
PSME3-215ENST00000592578 SPATA31D1Q6ZQQ2 1576 aa23.53■■□□□ 1.36
PSME3-215ENST00000592578 CEBPAP49715 358 aaPredicted RBP23.53■■□□□ 1.36
PSME3-215ENST00000592578 ESF1Q9H501 851 aaKnown RBP23.52■■□□□ 1.36
PSME3-215ENST00000592578 CDK11AQ9UQ88 783 aaPredicted RBP23.52■■□□□ 1.36
PSME3-215ENST00000592578 STRCQ7RTU9 1775 aa23.51■■□□□ 1.35
PSME3-215ENST00000592578 PTPRTO14522 1441 aa23.5■■□□□ 1.35
PSME3-215ENST00000592578 ZNF518AQ6AHZ1 1483 aa23.49■■□□□ 1.35
PSME3-215ENST00000592578 MYO5CQ9NQX4 1742 aa23.48■■□□□ 1.35
PSME3-215ENST00000592578 UBTFP17480 764 aaKnown RBP23.48■■□□□ 1.35
PSME3-215ENST00000592578 EHMT2Q96KQ7 1210 aa23.46■■□□□ 1.35
PSME3-215ENST00000592578 ATP1B4Q9UN42 357 aaPredicted RBP23.45■■□□□ 1.34
PSME3-215ENST00000592578 CDK13Q14004 1512 aaKnown RBP23.44■■□□□ 1.34
PSME3-215ENST00000592578 IQSEC2Q5JU85 1478 aa23.43■■□□□ 1.34
PSME3-215ENST00000592578 ARHGAP5Q13017 1502 aa23.38■■□□□ 1.33
PSME3-215ENST00000592578 FMN1Q68DA7 1419 aa23.38■■□□□ 1.33
PSME3-215ENST00000592578 KIF14Q15058 1648 aa23.37■■□□□ 1.33
PSME3-215ENST00000592578 TRAPPC8Q9Y2L5 1435 aa23.37■■□□□ 1.33
PSME3-215ENST00000592578 AFAP1Q8N556 730 aa23.37■■□□□ 1.33
PSME3-215ENST00000592578 KDM5CP41229 1560 aa23.36■■□□□ 1.33
PSME3-215ENST00000592578 REREQ9P2R6 1566 aa23.36■■□□□ 1.33
PSME3-215ENST00000592578 CLIP1P30622 1438 aa23.36■■□□□ 1.33
PSME3-215ENST00000592578 C3P01024 1663 aa23.35■■□□□ 1.33
PSME3-215ENST00000592578 CNTLNQ9NXG0 1405 aa23.33■■□□□ 1.33
PSME3-215ENST00000592578 DIP2CQ9Y2E4 1556 aa23.32■■□□□ 1.32
PSME3-215ENST00000592578 LTBP4Q8N2S1 1624 aa23.32■■□□□ 1.32
PSME3-215ENST00000592578 MLH3Q9UHC1 1453 aa23.3■■□□□ 1.32
PSME3-215ENST00000592578 AGLP35573 1532 aa23.3■■□□□ 1.32
PSME3-215ENST00000592578 TROQ12816 1431 aaPredicted RBP23.29■■□□□ 1.32
PSME3-215ENST00000592578 NCOA1Q15788 1441 aa23.29■■□□□ 1.32
PSME3-215ENST00000592578 ARHGAP35Q9NRY4 1499 aa23.27■■□□□ 1.32
PSME3-215ENST00000592578 UBAP1LF5GYI3 381 aa23.25■■□□□ 1.31
PSME3-215ENST00000592578 ABCA6Q8N139 1617 aa23.25■■□□□ 1.31
PSME3-215ENST00000592578 NPATQ14207 1427 aa23.23■■□□□ 1.31
PSME3-215ENST00000592578 CAMSAP1Q5T5Y3 1602 aa23.22■■□□□ 1.31
PSME3-215ENST00000592578 PKD2Q13563 968 aa23.19■■□□□ 1.3
PSME3-215ENST00000592578 CDC42BPBQ9Y5S2 1711 aa23.19■■□□□ 1.3
PSME3-215ENST00000592578 MROH2AA6NES4 1674 aa23.18■■□□□ 1.3
PSME3-215ENST00000592578 ABCC1P33527 1531 aa23.17■■□□□ 1.3
PSME3-215ENST00000592578 ITSN2Q9NZM3 1697 aa23.16■■□□□ 1.3
PSME3-215ENST00000592578 PREX2Q70Z35 1606 aa23.15■■□□□ 1.3
PSME3-215ENST00000592578 ZMYM3Q14202 1370 aa23.14■■□□□ 1.3
PSME3-215ENST00000592578 ZNF335Q9H4Z2 1342 aaPredicted RBP23.14■■□□□ 1.3
PSME3-215ENST00000592578 NCKAP5LQ9HCH0 1330 aa23.14■■□□□ 1.3
PSME3-215ENST00000592578 KIDINS220Q9ULH0 1771 aa23.13■■□□□ 1.29
PSME3-215ENST00000592578 SUPT6HQ7KZ85 1726 aaKnown RBP23.12■■□□□ 1.29
PSME3-215ENST00000592578 PLA2R1Q13018 1463 aa23.11■■□□□ 1.29
PSME3-215ENST00000592578 CCDC18Q5T9S5 1454 aa23.09■■□□□ 1.29
PSME3-215ENST00000592578 SPAG9O60271 1321 aaKnown RBP23.08■■□□□ 1.28
PSME3-215ENST00000592578 PPP6R1Q9UPN7 881 aa23.07■■□□□ 1.28
PSME3-215ENST00000592578 SCAF1Q9H7N4 1312 aaKnown RBP23.07■■□□□ 1.28
PSME3-215ENST00000592578 ZNF142P52746 1687 aaPredicted RBP23.06■■□□□ 1.28
PSME3-215ENST00000592578 TOM1O60784 492 aa23.05■■□□□ 1.28
PSME3-215ENST00000592578 ZNF777Q9ULD5 760 aaPredicted RBP23.05■■□□□ 1.28
PSME3-215ENST00000592578 MYO3AQ8NEV4 1616 aa23.04■■□□□ 1.28
PSME3-215ENST00000592578 LRRIQ1Q96JM4 1722 aa23.03■■□□□ 1.28
PSME3-215ENST00000592578 SAMD9LQ8IVG5 1584 aa23.03■■□□□ 1.28
PSME3-215ENST00000592578 CEP170BQ9Y4F5 1589 aaPredicted RBP23.03■■□□□ 1.28
PSME3-215ENST00000592578 CASKIN1Q8WXD9 1431 aa23.03■■□□□ 1.28
PSME3-215ENST00000592578 TCOF1Q13428 1488 aaKnown RBP23.02■■□□□ 1.28
PSME3-215ENST00000592578 CLTCQ00610 1675 aaKnown RBP23.02■■□□□ 1.28
PSME3-215ENST00000592578 CDC42BPAQ5VT25 1732 aa23.02■■□□□ 1.28
PSME3-215ENST00000592578 GGT6Q6P531 493 aa22.99■■□□□ 1.27
PSME3-215ENST00000592578 PIP4K2BP78356 416 aa22.98■■□□□ 1.27
PSME3-215ENST00000592578 PHF23Q9BUL5 403 aaPredicted RBP22.98■■□□□ 1.27
PSME3-215ENST00000592578 HSPA1LP34931 641 aa22.97■■□□□ 1.27
PSME3-215ENST00000592578 PTPRKQ15262 1439 aa22.97■■□□□ 1.27
PSME3-215ENST00000592578 A2MP01023 1474 aa22.97■■□□□ 1.27
PSME3-215ENST00000592578 PLEKHH2Q8IVE3 1493 aa22.97■■□□□ 1.27
PSME3-215ENST00000592578 MED1Q15648 1581 aaPredicted RBP22.97■■□□□ 1.27
PSME3-215ENST00000592578 ATP7AQ04656 1500 aa22.96■■□□□ 1.27
PSME3-215ENST00000592578 SYCP2Q9BX26 1530 aa22.96■■□□□ 1.27
PSME3-215ENST00000592578 CPS1P31327 1500 aa22.95■■□□□ 1.26
PSME3-215ENST00000592578 HNRNPMP52272 730 aaKnown RBP eCLIP22.95■■□□□ 1.26
PSME3-215ENST00000592578 FYCO1Q9BQS8 1478 aa22.93■■□□□ 1.26
PSME3-215ENST00000592578 A2ML1A8K2U0 1454 aa22.92■■□□□ 1.26
PSME3-215ENST00000592578 KIAA1107Q9UPP5 1409 aa22.92■■□□□ 1.26
PSME3-215ENST00000592578 CFDP1Q9UEE9 299 aaPredicted RBP22.91■■□□□ 1.26
PSME3-215ENST00000592578 PLXNC1O60486 1568 aa22.91■■□□□ 1.26
PSME3-215ENST00000592578 INO80Q9ULG1 1556 aaPredicted RBP22.88■■□□□ 1.25
PSME3-215ENST00000592578 GPATCH8Q9UKJ3 1502 aaKnown RBP22.87■■□□□ 1.25
PSME3-215ENST00000592578 ADGBQ8N7X0 1667 aa22.87■■□□□ 1.25
PSME3-215ENST00000592578 DNMT1P26358 1616 aaKnown RBP22.87■■□□□ 1.25
PSME3-215ENST00000592578 POLR1AO95602 1720 aaPredicted RBP22.87■■□□□ 1.25
PSME3-215ENST00000592578 SHANK2Q9UPX8 1470 aa22.86■■□□□ 1.25
PSME3-215ENST00000592578 ANKLE2Q86XL3 938 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms