RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 PLCH2O75038 1416 aa32.77■■■□□ 2.84
PRKCSH-216ENST00000592445 ATP1B4Q9UN42 357 aaPredicted RBP32.76■■■□□ 2.83
PRKCSH-216ENST00000592445 FER1L4A9Z1Z3 1794 aa32.73■■■□□ 2.83
PRKCSH-216ENST00000592445 EFCAB2Q5VUJ9 269 aa32.7■■■□□ 2.83
PRKCSH-216ENST00000592445 CERKQ8TCT0 537 aa32.7■■■□□ 2.83
PRKCSH-216ENST00000592445 ATP10AO60312 1499 aa32.68■■■□□ 2.82
PRKCSH-216ENST00000592445 C9orf84Q5VXU9 1444 aa32.67■■■□□ 2.82
PRKCSH-216ENST00000592445 EHMT2Q96KQ7 1210 aa32.66■■■□□ 2.82
PRKCSH-216ENST00000592445 CDK11AQ9UQ88 783 aaPredicted RBP32.66■■■□□ 2.82
PRKCSH-216ENST00000592445 UBTFP17480 764 aaKnown RBP32.64■■■□□ 2.82
PRKCSH-216ENST00000592445 FMN1Q68DA7 1419 aa32.63■■■□□ 2.81
PRKCSH-216ENST00000592445 ARHGEF12Q9NZN5 1544 aa32.62■■■□□ 2.81
PRKCSH-216ENST00000592445 MYO5CQ9NQX4 1742 aa32.62■■■□□ 2.81
PRKCSH-216ENST00000592445 CEBPAP49715 358 aaPredicted RBP32.59■■■□□ 2.81
PRKCSH-216ENST00000592445 MYT1LQ9UL68 1186 aa32.58■■■□□ 2.81
PRKCSH-216ENST00000592445 ZNF518AQ6AHZ1 1483 aa32.55■■■□□ 2.8
PRKCSH-216ENST00000592445 PREX1Q8TCU6 1659 aa32.55■■■□□ 2.8
PRKCSH-216ENST00000592445 AFAP1Q8N556 730 aa32.54■■■□□ 2.8
PRKCSH-216ENST00000592445 KIF14Q15058 1648 aa32.54■■■□□ 2.8
PRKCSH-216ENST00000592445 ARHGAP5Q13017 1502 aa32.53■■■□□ 2.8
PRKCSH-216ENST00000592445 ARHGAP35Q9NRY4 1499 aa32.51■■■□□ 2.79
PRKCSH-216ENST00000592445 TROQ12816 1431 aaPredicted RBP32.51■■■□□ 2.79
PRKCSH-216ENST00000592445 DMRT2Q9Y5R5 561 aa32.49■■■□□ 2.79
PRKCSH-216ENST00000592445 CLIP1P30622 1438 aa32.49■■■□□ 2.79
PRKCSH-216ENST00000592445 KDM5CP41229 1560 aa32.45■■■□□ 2.79
PRKCSH-216ENST00000592445 UHRF1BP1Q6BDS2 1440 aa32.45■■■□□ 2.79
PRKCSH-216ENST00000592445 ESF1Q9H501 851 aaKnown RBP32.4■■■□□ 2.78
PRKCSH-216ENST00000592445 DIP2CQ9Y2E4 1556 aa32.4■■■□□ 2.78
PRKCSH-216ENST00000592445 STRCQ7RTU9 1775 aa32.38■■■□□ 2.77
PRKCSH-216ENST00000592445 REREQ9P2R6 1566 aa32.35■■■□□ 2.77
PRKCSH-216ENST00000592445 MLH3Q9UHC1 1453 aa32.35■■■□□ 2.77
PRKCSH-216ENST00000592445 SETD1BQ9UPS6 1966 aaKnown RBP32.34■■■□□ 2.77
PRKCSH-216ENST00000592445 ABCA6Q8N139 1617 aa32.33■■■□□ 2.77
PRKCSH-216ENST00000592445 CDC42BPBQ9Y5S2 1711 aa32.32■■■□□ 2.76
PRKCSH-216ENST00000592445 LRRIQ1Q96JM4 1722 aa32.31■■■□□ 2.76
PRKCSH-216ENST00000592445 TRAPPC8Q9Y2L5 1435 aa32.3■■■□□ 2.76
PRKCSH-216ENST00000592445 DISP3Q9P2K9 1392 aa32.3■■■□□ 2.76
PRKCSH-216ENST00000592445 C3P01024 1663 aa32.28■■■□□ 2.76
PRKCSH-216ENST00000592445 ABCC1P33527 1531 aa32.27■■■□□ 2.76
PRKCSH-216ENST00000592445 AGLP35573 1532 aa32.26■■■□□ 2.76
PRKCSH-216ENST00000592445 PREX2Q70Z35 1606 aa32.26■■■□□ 2.76
PRKCSH-216ENST00000592445 PTPRTO14522 1441 aa32.26■■■□□ 2.75
PRKCSH-216ENST00000592445 CCDC18Q5T9S5 1454 aa32.23■■■□□ 2.75
PRKCSH-216ENST00000592445 ITSN2Q9NZM3 1697 aa32.22■■■□□ 2.75
PRKCSH-216ENST00000592445 CASKIN1Q8WXD9 1431 aa32.21■■■□□ 2.75
PRKCSH-216ENST00000592445 CNTLNQ9NXG0 1405 aa32.19■■■□□ 2.74
PRKCSH-216ENST00000592445 ILDR2Q71H61 639 aa32.17■■■□□ 2.74
PRKCSH-216ENST00000592445 ZNF777Q9ULD5 760 aaPredicted RBP32.16■■■□□ 2.74
PRKCSH-216ENST00000592445 KIDINS220Q9ULH0 1771 aa32.16■■■□□ 2.74
PRKCSH-216ENST00000592445 CHIC1Q5VXU3 224 aa32.15■■■□□ 2.74
PRKCSH-216ENST00000592445 NCOA1Q15788 1441 aa32.12■■■□□ 2.73
PRKCSH-216ENST00000592445 CDC42BPAQ5VT25 1732 aa32.12■■■□□ 2.73
PRKCSH-216ENST00000592445 LTBP4Q8N2S1 1624 aa32.08■■■□□ 2.73
PRKCSH-216ENST00000592445 SPAG9O60271 1321 aaKnown RBP32.08■■■□□ 2.73
PRKCSH-216ENST00000592445 SAMD9LQ8IVG5 1584 aa32.08■■■□□ 2.73
PRKCSH-216ENST00000592445 SOCS7O14512 581 aa32.08■■■□□ 2.73
PRKCSH-216ENST00000592445 NPATQ14207 1427 aa32.06■■■□□ 2.72
PRKCSH-216ENST00000592445 ZMYM3Q14202 1370 aa32.06■■■□□ 2.72
PRKCSH-216ENST00000592445 HNRNPMP52272 730 aaKnown RBP eCLIP32.04■■■□□ 2.72
PRKCSH-216ENST00000592445 SYCP2Q9BX26 1530 aa32.04■■■□□ 2.72
PRKCSH-216ENST00000592445 CAMSAP1Q5T5Y3 1602 aa32.04■■■□□ 2.72
PRKCSH-216ENST00000592445 IQSEC2Q5JU85 1478 aa32.03■■■□□ 2.72
PRKCSH-216ENST00000592445 FYCO1Q9BQS8 1478 aa32.03■■■□□ 2.72
PRKCSH-216ENST00000592445 SPATA31D1Q6ZQQ2 1576 aa32.02■■■□□ 2.72
PRKCSH-216ENST00000592445 MROH2AA6NES4 1674 aa32.02■■■□□ 2.72
PRKCSH-216ENST00000592445 GPATCH8Q9UKJ3 1502 aaKnown RBP32■■■□□ 2.71
PRKCSH-216ENST00000592445 SUPT6HQ7KZ85 1726 aaKnown RBP31.99■■■□□ 2.71
PRKCSH-216ENST00000592445 NCKAP5LQ9HCH0 1330 aa31.99■■■□□ 2.71
PRKCSH-216ENST00000592445 CFDP1Q9UEE9 299 aaPredicted RBP31.97■■■□□ 2.71
PRKCSH-216ENST00000592445 ATP7AQ04656 1500 aa31.95■■■□□ 2.71
PRKCSH-216ENST00000592445 KIAA1107Q9UPP5 1409 aa31.93■■■□□ 2.7
PRKCSH-216ENST00000592445 CLTCQ00610 1675 aaKnown RBP31.92■■■□□ 2.7
PRKCSH-216ENST00000592445 A2MP01023 1474 aa31.92■■■□□ 2.7
PRKCSH-216ENST00000592445 PLEKHH2Q8IVE3 1493 aa31.92■■■□□ 2.7
PRKCSH-216ENST00000592445 GGT6Q6P531 493 aa31.92■■■□□ 2.7
PRKCSH-216ENST00000592445 ZNF335Q9H4Z2 1342 aaPredicted RBP31.92■■■□□ 2.7
PRKCSH-216ENST00000592445 CCNB3Q8WWL7 1395 aa31.91■■■□□ 2.7
PRKCSH-216ENST00000592445 PKD2Q13563 968 aa31.9■■■□□ 2.7
PRKCSH-216ENST00000592445 UBAP1LF5GYI3 381 aa31.88■■■□□ 2.69
PRKCSH-216ENST00000592445 PLXNC1O60486 1568 aa31.88■■■□□ 2.69
PRKCSH-216ENST00000592445 INO80Q9ULG1 1556 aaPredicted RBP31.88■■■□□ 2.69
PRKCSH-216ENST00000592445 MYO3AQ8NEV4 1616 aa31.87■■■□□ 2.69
PRKCSH-216ENST00000592445 PTPRKQ15262 1439 aa31.86■■■□□ 2.69
PRKCSH-216ENST00000592445 PLA2R1Q13018 1463 aa31.85■■■□□ 2.69
PRKCSH-216ENST00000592445 CEP170BQ9Y4F5 1589 aaPredicted RBP31.84■■■□□ 2.69
PRKCSH-216ENST00000592445 ZNF142P52746 1687 aaPredicted RBP31.83■■■□□ 2.69
PRKCSH-216ENST00000592445 MTUS2Q5JR59 1369 aa31.82■■■□□ 2.69
PRKCSH-216ENST00000592445 PPP6R1Q9UPN7 881 aa31.81■■■□□ 2.68
PRKCSH-216ENST00000592445 TCOF1Q13428 1488 aaKnown RBP31.79■■■□□ 2.68
PRKCSH-216ENST00000592445 ADGBQ8N7X0 1667 aa31.76■■■□□ 2.67
PRKCSH-216ENST00000592445 ZNF644Q9H582 1327 aaPredicted RBP31.75■■■□□ 2.67
PRKCSH-216ENST00000592445 A2ML1A8K2U0 1454 aa31.71■■■□□ 2.67
PRKCSH-216ENST00000592445 MBD5Q9P267 1494 aa31.67■■■□□ 2.66
PRKCSH-216ENST00000592445 TIAM1Q13009 1591 aa31.67■■■□□ 2.66
PRKCSH-216ENST00000592445 DHX29Q7Z478 1369 aaKnown RBP31.66■■■□□ 2.66
PRKCSH-216ENST00000592445 RTEL1-TNFRSF6BF6WH68 1400 aa31.66■■■□□ 2.66
PRKCSH-216ENST00000592445 DNMT1P26358 1616 aaKnown RBP31.65■■■□□ 2.66
PRKCSH-216ENST00000592445 SCAF1Q9H7N4 1312 aaKnown RBP31.65■■■□□ 2.66
PRKCSH-216ENST00000592445 KIF3BO15066 747 aa31.63■■■□□ 2.65
PRKCSH-216ENST00000592445 EHBP1L1Q8N3D4 1523 aa31.62■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms