RNA–Protein interactions for RNA: ENST00000592054.5

DNMT1-226, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-226ENST00000592054 ZNF687Q8N1G0 1237 aa8.1□□□□□ -1.11
DNMT1-226ENST00000592054 GPR153Q6NV75 609 aa8.08□□□□□ -1.12
DNMT1-226ENST00000592054 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.07□□□□□ -1.12
DNMT1-226ENST00000592054 RIOK3O14730 519 aaKnown RBP8.07□□□□□ -1.12
DNMT1-226ENST00000592054 ARSIQ5FYB1 569 aa8.07□□□□□ -1.12
DNMT1-226ENST00000592054 ANKRD13DQ6ZTN6 518 aa8.07□□□□□ -1.12
DNMT1-226ENST00000592054 ZFP91Q96JP5 570 aaPredicted RBP8.07□□□□□ -1.12
DNMT1-226ENST00000592054 PHF8Q9UPP1 1060 aa8.07□□□□□ -1.12
DNMT1-226ENST00000592054 RB1CC1Q8TDY2 1594 aa8.06□□□□□ -1.12
DNMT1-226ENST00000592054 MS4A4AQ96JQ5 239 aa8.06□□□□□ -1.12
DNMT1-226ENST00000592054 VGFO15240 615 aaPredicted RBP8.04□□□□□ -1.12
DNMT1-226ENST00000592054 PTGER2P43116 358 aa8.04□□□□□ -1.12
DNMT1-226ENST00000592054 KHSRPQ92945 711 aaKnown RBP eCLIP8.02□□□□□ -1.13
DNMT1-226ENST00000592054 RNF25Q96BH1 459 aaPredicted RBP8.02□□□□□ -1.13
DNMT1-226ENST00000592054 ZNF316A6NFI3 1004 aaPredicted RBP8.01□□□□□ -1.13
DNMT1-226ENST00000592054 NLRP6P59044 892 aa7.99□□□□□ -1.13
DNMT1-226ENST00000592054 LSM11P83369 360 aaKnown RBP eCLIP7.97□□□□□ -1.13
DNMT1-226ENST00000592054 BCL11BQ9C0K0 894 aaPredicted RBP7.96□□□□□ -1.14
DNMT1-226ENST00000592054 STK24Q9Y6E0 443 aa7.96□□□□□ -1.14
DNMT1-226ENST00000592054 NUDT7P0C024 238 aa7.95□□□□□ -1.14
DNMT1-226ENST00000592054 TAOK2Q9UL54 1235 aa7.95□□□□□ -1.14
DNMT1-226ENST00000592054 CECR2Q9BXF3 1484 aa7.94□□□□□ -1.14
DNMT1-226ENST00000592054 AXIN2Q9Y2T1 843 aa7.93□□□□□ -1.14
DNMT1-226ENST00000592054 C2orf72A6NCS6 295 aa7.92□□□□□ -1.14
DNMT1-226ENST00000592054 FBXO22Q8NEZ5 403 aa7.92□□□□□ -1.14
DNMT1-226ENST00000592054 PBX2P40425 430 aa7.91□□□□□ -1.14
DNMT1-226ENST00000592054 UNC13AQ9UPW8 1703 aa7.9□□□□□ -1.14
DNMT1-226ENST00000592054 LHX6Q9UPM6 363 aa7.9□□□□□ -1.14
DNMT1-226ENST00000592054 STK25O00506 426 aa7.89□□□□□ -1.15
DNMT1-226ENST00000592054 MFRPQ9BY79 579 aa7.89□□□□□ -1.15
DNMT1-226ENST00000592054 PCDHGA4Q9Y5G9 962 aa7.89□□□□□ -1.15
DNMT1-226ENST00000592054 TMC2Q8TDI7 906 aa7.88□□□□□ -1.15
DNMT1-226ENST00000592054 PLA2G2EQ9NZK7 142 aa7.88□□□□□ -1.15
DNMT1-226ENST00000592054 KIF3CO14782 793 aa7.87□□□□□ -1.15
DNMT1-226ENST00000592054 CC2D2AQ9P2K1 1620 aa7.87□□□□□ -1.15
DNMT1-226ENST00000592054 HCSTQ9UBK5 93 aa7.86□□□□□ -1.15
DNMT1-226ENST00000592054 POTEEQ6S8J3 1075 aa7.85□□□□□ -1.15
DNMT1-226ENST00000592054 SLC34A2O95436 690 aa7.83□□□□□ -1.16
DNMT1-226ENST00000592054 ADGRD1Q6QNK2 874 aa7.83□□□□□ -1.16
DNMT1-226ENST00000592054 ARHGAP33O14559 1287 aa7.82□□□□□ -1.16
DNMT1-226ENST00000592054 NACADO15069 1562 aa7.82□□□□□ -1.16
DNMT1-226ENST00000592054 ECM2O94769 699 aaPredicted RBP7.82□□□□□ -1.16
DNMT1-226ENST00000592054 CUX2O14529 1486 aa7.81□□□□□ -1.16
DNMT1-226ENST00000592054 PSDA5PKW4 1024 aaPredicted RBP7.8□□□□□ -1.16
DNMT1-226ENST00000592054 STAC3Q96MF2 364 aa7.79□□□□□ -1.16
DNMT1-226ENST00000592054 BICRAQ9NZM4 1560 aa7.78□□□□□ -1.16
DNMT1-226ENST00000592054 PSEN2P49810 448 aa7.77□□□□□ -1.17
DNMT1-226ENST00000592054 PKD2Q13563 968 aa7.77□□□□□ -1.17
DNMT1-226ENST00000592054 KCTD12Q96CX2 325 aaKnown RBP7.76□□□□□ -1.17
DNMT1-226ENST00000592054 PPP1R37O75864 691 aa7.75□□□□□ -1.17
DNMT1-226ENST00000592054 DMRTA1Q5VZB9 504 aa7.75□□□□□ -1.17
DNMT1-226ENST00000592054 TK2O00142 265 aa7.74□□□□□ -1.17
DNMT1-226ENST00000592054 RGL2O15211 777 aa7.73□□□□□ -1.17
DNMT1-226ENST00000592054 PPP4R3BQ5MIZ7 849 aa7.73□□□□□ -1.17
DNMT1-226ENST00000592054 HRO43593 1189 aa7.72□□□□□ -1.17
DNMT1-226ENST00000592054 PTCD2Q8WV60 388 aaKnown RBP7.72□□□□□ -1.17
DNMT1-226ENST00000592054 KCNH8Q96L42 1107 aa7.72□□□□□ -1.17
DNMT1-226ENST00000592054 TBC1D12O60347 775 aa7.71□□□□□ -1.18
DNMT1-226ENST00000592054 PLPP6Q8IY26 295 aa7.71□□□□□ -1.18
DNMT1-226ENST00000592054 KCNK17Q96T54 332 aa7.7□□□□□ -1.18
DNMT1-226ENST00000592054 KDM4FA0A1W2PPD8 638 aa7.69□□□□□ -1.18
DNMT1-226ENST00000592054 PTPN5P54829 565 aa7.69□□□□□ -1.18
DNMT1-226ENST00000592054 EIF4G1Q04637 1599 aaKnown RBP7.68□□□□□ -1.18
DNMT1-226ENST00000592054 FOXK1P85037 733 aa7.68□□□□□ -1.18
DNMT1-226ENST00000592054 DCAF8L2P0C7V8 631 aa7.67□□□□□ -1.18
DNMT1-226ENST00000592054 GPHNQ9NQX3 736 aaPredicted RBP7.66□□□□□ -1.18
DNMT1-226ENST00000592054 DSG2Q14126 1118 aa7.65□□□□□ -1.18
DNMT1-226ENST00000592054 ERCC6Q03468 1493 aa7.64□□□□□ -1.19
DNMT1-226ENST00000592054 SHROOM4Q9ULL8 1493 aa7.64□□□□□ -1.19
DNMT1-226ENST00000592054 ZNF454Q8N9F8 522 aa7.63□□□□□ -1.19
DNMT1-226ENST00000592054 UPF1Q92900 1129 aaKnown RBP eCLIP7.63□□□□□ -1.19
DNMT1-226ENST00000592054 VPS9D1Q9Y2B5 631 aa7.63□□□□□ -1.19
DNMT1-226ENST00000592054 GOLGA8CPA6NN73 597 aa7.62□□□□□ -1.19
DNMT1-226ENST00000592054 IRX2Q9BZI1 471 aaPredicted RBP7.59□□□□□ -1.19
DNMT1-226ENST00000592054 RTN4Q9NQC3 1192 aaKnown RBP7.58□□□□□ -1.2
DNMT1-226ENST00000592054 PTPREP23469 700 aa7.57□□□□□ -1.2
DNMT1-226ENST00000592054 THSD4Q6ZMP0 1018 aa7.57□□□□□ -1.2
DNMT1-226ENST00000592054 MRPL50Q8N5N7 158 aaKnown RBP7.57□□□□□ -1.2
DNMT1-226ENST00000592054 OXER1Q8TDS5 423 aa7.57□□□□□ -1.2
DNMT1-226ENST00000592054 WNT2BQ93097 391 aa7.57□□□□□ -1.2
DNMT1-226ENST00000592054 RGS20O76081 388 aa7.56□□□□□ -1.2
DNMT1-226ENST00000592054 BCL2L12Q9HB09 334 aa7.56□□□□□ -1.2
DNMT1-226ENST00000592054 HS6ST3Q8IZP7 471 aa7.55□□□□□ -1.2
DNMT1-226ENST00000592054 SLC4A5Q9BY07 1137 aa7.55□□□□□ -1.2
DNMT1-226ENST00000592054 A0A0G2JS52 829 aa7.53□□□□□ -1.2
DNMT1-226ENST00000592054 BHMG1C9JSJ3 638 aaPredicted RBP7.53□□□□□ -1.2
DNMT1-226ENST00000592054 CHGAP10645 457 aaKnown RBP7.53□□□□□ -1.2
DNMT1-226ENST00000592054 FOSBP53539 338 aa7.53□□□□□ -1.2
DNMT1-226ENST00000592054 IFFO2Q5TF58 517 aa7.53□□□□□ -1.2
DNMT1-226ENST00000592054 ZBED2Q9BTP6 218 aa7.53□□□□□ -1.2
DNMT1-226ENST00000592054 PPP1R15BQ5SWA1 713 aa7.52□□□□□ -1.21
DNMT1-226ENST00000592054 NBPF3Q9H094 633 aa7.52□□□□□ -1.21
DNMT1-226ENST00000592054 ZDHHC16Q969W1 377 aa7.5□□□□□ -1.21
DNMT1-226ENST00000592054 EVI5O60447 810 aa7.49□□□□□ -1.21
DNMT1-226ENST00000592054 JPH4Q96JJ6 628 aa7.49□□□□□ -1.21
DNMT1-226ENST00000592054 ADAM33Q9BZ11 813 aa7.49□□□□□ -1.21
DNMT1-226ENST00000592054 AMER1Q5JTC6 1135 aaPredicted RBP7.48□□□□□ -1.21
DNMT1-226ENST00000592054 CRISPLD2Q9H0B8 497 aa7.48□□□□□ -1.21
DNMT1-226ENST00000592054 PDE4AP27815 886 aa7.47□□□□□ -1.21
DNMT1-226ENST00000592054 RYDENQ9NUL5 291 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms