RNA–Protein interactions for RNA: ENST00000591115.5

PTPN2-210, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,648 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-210ENST00000591115 PHLDB1Q86UU1 1377 aa14.91□□□□□ -0.02
PTPN2-210ENST00000591115 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.91□□□□□ -0.02
PTPN2-210ENST00000591115 ABCC10Q5T3U5 1492 aa14.91□□□□□ -0.02
PTPN2-210ENST00000591115 ITSN2Q9NZM3 1697 aa14.91□□□□□ -0.02
PTPN2-210ENST00000591115 PREX2Q70Z35 1606 aa14.9□□□□□ -0.02
PTPN2-210ENST00000591115 KCNH8Q96L42 1107 aa14.89□□□□□ -0.03
PTPN2-210ENST00000591115 CDC42BPBQ9Y5S2 1711 aa14.88□□□□□ -0.03
PTPN2-210ENST00000591115 MAP3K4Q9Y6R4 1608 aa14.87□□□□□ -0.03
PTPN2-210ENST00000591115 GLI2P10070 1586 aa14.86□□□□□ -0.03
PTPN2-210ENST00000591115 TSPOAP1O95153 1857 aa14.85□□□□□ -0.03
PTPN2-210ENST00000591115 MYOM3Q5VTT5 1437 aa14.84□□□□□ -0.03
PTPN2-210ENST00000591115 GPATCH8Q9UKJ3 1502 aaKnown RBP14.84□□□□□ -0.03
PTPN2-210ENST00000591115 CLSPNQ9HAW4 1339 aa14.83□□□□□ -0.04
PTPN2-210ENST00000591115 FGD6Q6ZV73 1430 aa14.83□□□□□ -0.04
PTPN2-210ENST00000591115 PPRC1Q5VV67 1664 aaKnown RBP14.82□□□□□ -0.04
PTPN2-210ENST00000591115 ARHGAP5Q13017 1502 aa14.81□□□□□ -0.04
PTPN2-210ENST00000591115 PTPN23Q9H3S7 1636 aa14.81□□□□□ -0.04
PTPN2-210ENST00000591115 SAMD9LQ8IVG5 1584 aa14.79□□□□□ -0.04
PTPN2-210ENST00000591115 FAM69CQ0P6D2 419 aa14.79□□□□□ -0.04
PTPN2-210ENST00000591115 ARAP3Q8WWN8 1544 aa14.79□□□□□ -0.04
PTPN2-210ENST00000591115 PLCH2O75038 1416 aa14.78□□□□□ -0.04
PTPN2-210ENST00000591115 CD109Q6YHK3 1445 aa14.78□□□□□ -0.04
PTPN2-210ENST00000591115 FAM50AQ14320 339 aaKnown RBP14.77□□□□□ -0.04
PTPN2-210ENST00000591115 CAMSAP2Q08AD1 1489 aa14.77□□□□□ -0.04
PTPN2-210ENST00000591115 CFAP74Q9C0B2 1584 aa14.77□□□□□ -0.05
PTPN2-210ENST00000591115 DHX57Q6P158 1386 aaKnown RBP14.75□□□□□ -0.05
PTPN2-210ENST00000591115 FANCAO15360 1455 aa14.75□□□□□ -0.05
PTPN2-210ENST00000591115 MIA2Q96PC5 1412 aa14.75□□□□□ -0.05
PTPN2-210ENST00000591115 SETD5Q9C0A6 1442 aa14.75□□□□□ -0.05
PTPN2-210ENST00000591115 ABCC1P33527 1531 aa14.75□□□□□ -0.05
PTPN2-210ENST00000591115 TCOF1Q13428 1488 aaKnown RBP14.74□□□□□ -0.05
PTPN2-210ENST00000591115 CFDP1Q9UEE9 299 aaPredicted RBP14.74□□□□□ -0.05
PTPN2-210ENST00000591115 SYCP2Q9BX26 1530 aa14.73□□□□□ -0.05
PTPN2-210ENST00000591115 ITGAEP38570 1179 aa14.73□□□□□ -0.05
PTPN2-210ENST00000591115 ZNF644Q9H582 1327 aaPredicted RBP14.72□□□□□ -0.05
PTPN2-210ENST00000591115 CROCC2H7BZ55 1655 aa14.72□□□□□ -0.05
PTPN2-210ENST00000591115 RAB3GAP2Q9H2M9 1393 aa14.72□□□□□ -0.05
PTPN2-210ENST00000591115 ZNF777Q9ULD5 760 aaPredicted RBP14.71□□□□□ -0.05
PTPN2-210ENST00000591115 TRHP20396 242 aaPredicted RBP14.7□□□□□ -0.06
PTPN2-210ENST00000591115 DNMT1P26358 1616 aaKnown RBP14.7□□□□□ -0.06
PTPN2-210ENST00000591115 ADGRL1O94910 1474 aa14.69□□□□□ -0.06
PTPN2-210ENST00000591115 TEX14Q8IWB6 1497 aa14.69□□□□□ -0.06
PTPN2-210ENST00000591115 ARHGEF12Q9NZN5 1544 aa14.69□□□□□ -0.06
PTPN2-210ENST00000591115 NEO1Q92859 1461 aa14.68□□□□□ -0.06
PTPN2-210ENST00000591115 AKNAQ7Z591 1439 aa14.67□□□□□ -0.06
PTPN2-210ENST00000591115 ARHGEF5Q12774 1597 aa14.67□□□□□ -0.06
PTPN2-210ENST00000591115 EFCAB2Q5VUJ9 269 aa14.66□□□□□ -0.06
PTPN2-210ENST00000591115 RICTORQ6R327 1708 aa14.66□□□□□ -0.06
PTPN2-210ENST00000591115 HFM1A2PYH4 1435 aa14.66□□□□□ -0.06
PTPN2-210ENST00000591115 PLEKHH2Q8IVE3 1493 aa14.66□□□□□ -0.06
PTPN2-210ENST00000591115 FRMPD1Q5SYB0 1578 aa14.65□□□□□ -0.06
PTPN2-210ENST00000591115 MBD5Q9P267 1494 aa14.65□□□□□ -0.06
PTPN2-210ENST00000591115 ADGBQ8N7X0 1667 aa14.64□□□□□ -0.07
PTPN2-210ENST00000591115 CCDC141Q6ZP82 1450 aa14.64□□□□□ -0.07
PTPN2-210ENST00000591115 DAPK1P53355 1430 aa14.63□□□□□ -0.07
PTPN2-210ENST00000591115 PTPRKQ15262 1439 aa14.63□□□□□ -0.07
PTPN2-210ENST00000591115 SCAPERQ9BY12 1400 aa14.63□□□□□ -0.07
PTPN2-210ENST00000591115 TRAPPC8Q9Y2L5 1435 aa14.63□□□□□ -0.07
PTPN2-210ENST00000591115 POGZQ7Z3K3 1410 aa14.62□□□□□ -0.07
PTPN2-210ENST00000591115 KIAA1107Q9UPP5 1409 aa14.62□□□□□ -0.07
PTPN2-210ENST00000591115 HNRNPMP52272 730 aaKnown RBP eCLIP14.62□□□□□ -0.07
PTPN2-210ENST00000591115 ABCC5O15440 1437 aa14.62□□□□□ -0.07
PTPN2-210ENST00000591115 KDM5CP41229 1560 aa14.61□□□□□ -0.07
PTPN2-210ENST00000591115 INO80Q9ULG1 1556 aaPredicted RBP14.61□□□□□ -0.07
PTPN2-210ENST00000591115 ZFYVE16Q7Z3T8 1539 aa14.6□□□□□ -0.07
PTPN2-210ENST00000591115 ZNF518AQ6AHZ1 1483 aa14.6□□□□□ -0.07
PTPN2-210ENST00000591115 SHANK2Q9UPX8 1470 aa14.6□□□□□ -0.07
PTPN2-210ENST00000591115 NAIPQ13075 1403 aa14.6□□□□□ -0.07
PTPN2-210ENST00000591115 MAST1Q9Y2H9 1570 aa14.59□□□□□ -0.07
PTPN2-210ENST00000591115 ACIN1Q9UKV3 1341 aaKnown RBP14.59□□□□□ -0.07
PTPN2-210ENST00000591115 KDM6BO15054 1643 aa14.58□□□□□ -0.07
PTPN2-210ENST00000591115 HECW2Q9P2P5 1572 aa14.58□□□□□ -0.07
PTPN2-210ENST00000591115 DENND4BO75064 1496 aaPredicted RBP14.58□□□□□ -0.08
PTPN2-210ENST00000591115 COL17A1Q9UMD9 1497 aaPredicted RBP14.58□□□□□ -0.08
PTPN2-210ENST00000591115 C9orf84Q5VXU9 1444 aa14.58□□□□□ -0.08
PTPN2-210ENST00000591115 KIDINS220Q9ULH0 1771 aa14.57□□□□□ -0.08
PTPN2-210ENST00000591115 ROCK1Q13464 1354 aa14.57□□□□□ -0.08
PTPN2-210ENST00000591115 ATP7AQ04656 1500 aa14.56□□□□□ -0.08
PTPN2-210ENST00000591115 GCC2Q8IWJ2 1684 aa14.56□□□□□ -0.08
PTPN2-210ENST00000591115 PLXNC1O60486 1568 aa14.56□□□□□ -0.08
PTPN2-210ENST00000591115 ZMYM4Q5VZL5 1548 aa14.56□□□□□ -0.08
PTPN2-210ENST00000591115 ABCA6Q8N139 1617 aa14.55□□□□□ -0.08
PTPN2-210ENST00000591115 RAPGEF3O95398 923 aa14.55□□□□□ -0.08
PTPN2-210ENST00000591115 AFAP1Q8N556 730 aa14.55□□□□□ -0.08
PTPN2-210ENST00000591115 ADGRL2O95490 1459 aa14.53□□□□□ -0.08
PTPN2-210ENST00000591115 CHIC2Q9UKJ5 165 aa14.53□□□□□ -0.08
PTPN2-210ENST00000591115 TIMELESSQ9UNS1 1208 aa14.52□□□□□ -0.09
PTPN2-210ENST00000591115 DIP2CQ9Y2E4 1556 aa14.51□□□□□ -0.09
PTPN2-210ENST00000591115 ARHGEF40Q8TER5 1519 aa14.5□□□□□ -0.09
PTPN2-210ENST00000591115 SPAG9O60271 1321 aaKnown RBP14.5□□□□□ -0.09
PTPN2-210ENST00000591115 MLH3Q9UHC1 1453 aa14.5□□□□□ -0.09
PTPN2-210ENST00000591115 ZNF316A6NFI3 1004 aaPredicted RBP14.5□□□□□ -0.09
PTPN2-210ENST00000591115 TSPY4P0CV99 314 aa14.48□□□□□ -0.09
PTPN2-210ENST00000591115 TSPY10P0CW01 314 aa14.48□□□□□ -0.09
PTPN2-210ENST00000591115 RSPH4AQ5TD94 716 aa14.48□□□□□ -0.09
PTPN2-210ENST00000591115 RTEL1-TNFRSF6BF6WH68 1400 aa14.48□□□□□ -0.09
PTPN2-210ENST00000591115 NCOA1Q15788 1441 aa14.48□□□□□ -0.09
PTPN2-210ENST00000591115 YEATS2Q9ULM3 1422 aa14.48□□□□□ -0.09
PTPN2-210ENST00000591115 ANKRD30AQ9BXX3 1397 aa14.47□□□□□ -0.09
PTPN2-210ENST00000591115 KIF15Q9NS87 1388 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms