RNA–Protein interactions for RNA: ENST00000590605.2

TCF3-214, Transcript of transcription factor 3, humanhuman

TSL 2

Gene TCF3, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-214ENST00000590605 PHLDB1Q86UU1 1377 aa24.23■■□□□ 1.47
TCF3-214ENST00000590605 TTC37Q6PGP7 1564 aa24.22■■□□□ 1.47
TCF3-214ENST00000590605 CFDP1Q9UEE9 299 aaPredicted RBP24.21■■□□□ 1.47
TCF3-214ENST00000590605 EFCAB2Q5VUJ9 269 aa24.2■■□□□ 1.46
TCF3-214ENST00000590605 ITSN2Q9NZM3 1697 aa24.18■■□□□ 1.46
TCF3-214ENST00000590605 MYO5CQ9NQX4 1742 aa24.16■■□□□ 1.46
TCF3-214ENST00000590605 FGD6Q6ZV73 1430 aa24.16■■□□□ 1.46
TCF3-214ENST00000590605 PREX2Q70Z35 1606 aa24.15■■□□□ 1.46
TCF3-214ENST00000590605 ADGRL1O94910 1474 aa24.14■■□□□ 1.46
TCF3-214ENST00000590605 CDC42BPAQ5VT25 1732 aa24.13■■□□□ 1.45
TCF3-214ENST00000590605 ARHGAP5Q13017 1502 aa24.13■■□□□ 1.45
TCF3-214ENST00000590605 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.13■■□□□ 1.454e-6■□□□□ 8.2
TCF3-214ENST00000590605 RRBP1Q9P2E9 1410 aaKnown RBP24.12■■□□□ 1.45
TCF3-214ENST00000590605 NEO1Q92859 1461 aa24.12■■□□□ 1.45
TCF3-214ENST00000590605 FANCAO15360 1455 aa24.11■■□□□ 1.45
TCF3-214ENST00000590605 PLEKHH2Q8IVE3 1493 aa24.11■■□□□ 1.45
TCF3-214ENST00000590605 CFAP74Q9C0B2 1584 aa24.09■■□□□ 1.45
TCF3-214ENST00000590605 CDC42BPBQ9Y5S2 1711 aa24.09■■□□□ 1.45
TCF3-214ENST00000590605 TCOF1Q13428 1488 aaKnown RBP24.08■■□□□ 1.45
TCF3-214ENST00000590605 KIAA1107Q9UPP5 1409 aa24.08■■□□□ 1.44
TCF3-214ENST00000590605 RSPH4AQ5TD94 716 aa24.07■■□□□ 1.44
TCF3-214ENST00000590605 ZNF777Q9ULD5 760 aaPredicted RBP24.06■■□□□ 1.44
TCF3-214ENST00000590605 AKNAQ7Z591 1439 aa24.05■■□□□ 1.44
TCF3-214ENST00000590605 PTPN23Q9H3S7 1636 aa24.03■■□□□ 1.44
TCF3-214ENST00000590605 CAMSAP2Q08AD1 1489 aa24.02■■□□□ 1.44
TCF3-214ENST00000590605 FAM50AQ14320 339 aaKnown RBP24.01■■□□□ 1.43
TCF3-214ENST00000590605 ZNF644Q9H582 1327 aaPredicted RBP24■■□□□ 1.43
TCF3-214ENST00000590605 SAMD9LQ8IVG5 1584 aa23.99■■□□□ 1.43
TCF3-214ENST00000590605 TRIM26Q12899 539 aaPredicted RBP23.99■■□□□ 1.43
TCF3-214ENST00000590605 ABCC1P33527 1531 aa23.97■■□□□ 1.43
TCF3-214ENST00000590605 SCAPERQ9BY12 1400 aa23.96■■□□□ 1.43
TCF3-214ENST00000590605 MBD5Q9P267 1494 aa23.95■■□□□ 1.42
TCF3-214ENST00000590605 HNRNPMP52272 730 aaKnown RBP eCLIP23.94■■□□□ 1.42
TCF3-214ENST00000590605 ARHGEF5Q12774 1597 aa23.94■■□□□ 1.42
TCF3-214ENST00000590605 DENND4BO75064 1496 aaPredicted RBP23.93■■□□□ 1.42
TCF3-214ENST00000590605 TSPY4P0CV99 314 aa23.92■■□□□ 1.42
TCF3-214ENST00000590605 TSPY10P0CW01 314 aa23.92■■□□□ 1.42
TCF3-214ENST00000590605 SYCP2Q9BX26 1530 aa23.91■■□□□ 1.42
TCF3-214ENST00000590605 CCDC141Q6ZP82 1450 aa23.91■■□□□ 1.42
TCF3-214ENST00000590605 ARHGEF12Q9NZN5 1544 aa23.9■■□□□ 1.42
TCF3-214ENST00000590605 ZNF518AQ6AHZ1 1483 aa23.9■■□□□ 1.42
TCF3-214ENST00000590605 ABCC5O15440 1437 aa23.88■■□□□ 1.41
TCF3-214ENST00000590605 DAPK1P53355 1430 aa23.88■■□□□ 1.41
TCF3-214ENST00000590605 POGZQ7Z3K3 1410 aa23.88■■□□□ 1.41
TCF3-214ENST00000590605 DNMT1P26358 1616 aaKnown RBP23.87■■□□□ 1.41
TCF3-214ENST00000590605 TRAPPC8Q9Y2L5 1435 aa23.86■■□□□ 1.41
TCF3-214ENST00000590605 SHANK2Q9UPX8 1470 aa23.86■■□□□ 1.41
TCF3-214ENST00000590605 FRMPD1Q5SYB0 1578 aa23.86■■□□□ 1.41
TCF3-214ENST00000590605 RAPGEF3O95398 923 aa23.85■■□□□ 1.41
TCF3-214ENST00000590605 AFAP1Q8N556 730 aa23.84■■□□□ 1.41
TCF3-214ENST00000590605 RTEL1-TNFRSF6BF6WH68 1400 aa23.84■■□□□ 1.41
TCF3-214ENST00000590605 SPAG9O60271 1321 aaKnown RBP23.83■■□□□ 1.4
TCF3-214ENST00000590605 HECW2Q9P2P5 1572 aa23.82■■□□□ 1.4
TCF3-214ENST00000590605 ROCK1Q13464 1354 aa23.8■■□□□ 1.4
TCF3-214ENST00000590605 KDM5CP41229 1560 aa23.8■■□□□ 1.4
TCF3-214ENST00000590605 C9orf84Q5VXU9 1444 aa23.8■■□□□ 1.4
TCF3-214ENST00000590605 MAGI2Q86UL8 1455 aa23.8■■□□□ 1.4
TCF3-214ENST00000590605 MLH3Q9UHC1 1453 aa23.8■■□□□ 1.4
TCF3-214ENST00000590605 MAST1Q9Y2H9 1570 aa23.79■■□□□ 1.4
TCF3-214ENST00000590605 ITGAEP38570 1179 aa23.79■■□□□ 1.4
TCF3-214ENST00000590605 RICTORQ6R327 1708 aa23.79■■□□□ 1.4
TCF3-214ENST00000590605 ANKRD30AQ9BXX3 1397 aa23.77■■□□□ 1.4
TCF3-214ENST00000590605 PTPRKQ15262 1439 aa23.76■■□□□ 1.39
TCF3-214ENST00000590605 ADGRL2O95490 1459 aa23.76■■□□□ 1.39
TCF3-214ENST00000590605 ZMYM4Q5VZL5 1548 aa23.76■■□□□ 1.39
TCF3-214ENST00000590605 CROCC2H7BZ55 1655 aa23.75■■□□□ 1.39
TCF3-214ENST00000590605 ADAMTSL3P82987 1691 aa23.75■■□□□ 1.39
TCF3-214ENST00000590605 ARHGEF40Q8TER5 1519 aa23.74■■□□□ 1.39
TCF3-214ENST00000590605 CHIC2Q9UKJ5 165 aa23.73■■□□□ 1.39
TCF3-214ENST00000590605 NCOA1Q15788 1441 aa23.73■■□□□ 1.39
TCF3-214ENST00000590605 MYT1LQ9UL68 1186 aa23.72■■□□□ 1.39
TCF3-214ENST00000590605 BCORL1Q5H9F3 1711 aa23.72■■□□□ 1.39
TCF3-214ENST00000590605 ATP7AQ04656 1500 aa23.71■■□□□ 1.39
TCF3-214ENST00000590605 ZFYVE16Q7Z3T8 1539 aa23.7■■□□□ 1.38
TCF3-214ENST00000590605 INO80Q9ULG1 1556 aaPredicted RBP23.69■■□□□ 1.38
TCF3-214ENST00000590605 ARID4BQ4LE39 1312 aaPredicted RBP23.69■■□□□ 1.38
TCF3-214ENST00000590605 PLXNC1O60486 1568 aa23.68■■□□□ 1.38
TCF3-214ENST00000590605 ACIN1Q9UKV3 1341 aaKnown RBP23.67■■□□□ 1.38
TCF3-214ENST00000590605 PTPRMP28827 1452 aa23.67■■□□□ 1.38
TCF3-214ENST00000590605 HFM1A2PYH4 1435 aa23.67■■□□□ 1.38
TCF3-214ENST00000590605 ADGBQ8N7X0 1667 aa23.66■■□□□ 1.38
TCF3-214ENST00000590605 MADDQ8WXG6 1647 aa23.66■■□□□ 1.38
TCF3-214ENST00000590605 KIF15Q9NS87 1388 aa23.65■■□□□ 1.38
TCF3-214ENST00000590605 PCGF6Q9BYE7 350 aa23.65■■□□□ 1.38
TCF3-214ENST00000590605 RRP7BPQ9NSQ0 103 aa23.65■■□□□ 1.38
TCF3-214ENST00000590605 KIDINS220Q9ULH0 1771 aa23.64■■□□□ 1.37
TCF3-214ENST00000590605 HRCP23327 699 aa23.62■■□□□ 1.37
TCF3-214ENST00000590605 DUOX2Q9NRD8 1548 aa23.62■■□□□ 1.37
TCF3-214ENST00000590605 DHX29Q7Z478 1369 aaKnown RBP23.62■■□□□ 1.37
TCF3-214ENST00000590605 ATP10AO60312 1499 aa23.62■■□□□ 1.37
TCF3-214ENST00000590605 NAIPQ13075 1403 aa23.61■■□□□ 1.37
TCF3-214ENST00000590605 SETD5Q9C0A6 1442 aa23.6■■□□□ 1.37
TCF3-214ENST00000590605 RIMS1Q86UR5 1692 aaKnown RBP23.6■■□□□ 1.37
TCF3-214ENST00000590605 YEATS2Q9ULM3 1422 aa23.59■■□□□ 1.37
TCF3-214ENST00000590605 ERBINQ96RT1 1412 aa23.59■■□□□ 1.37
TCF3-214ENST00000590605 ANKRD50Q9ULJ7 1429 aa23.59■■□□□ 1.37
TCF3-214ENST00000590605 A2MP01023 1474 aa23.58■■□□□ 1.37
TCF3-214ENST00000590605 SIGLEC1Q9BZZ2 1709 aa23.57■■□□□ 1.36
TCF3-214ENST00000590605 REREQ9P2R6 1566 aa23.57■■□□□ 1.36
TCF3-214ENST00000590605 DIP2CQ9Y2E4 1556 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms