RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 EFCAB2Q5VUJ9 269 aa33.44■■■□□ 2.94
ATG4D-212ENST00000590096 SUPT6HQ7KZ85 1726 aaKnown RBP33.42■■■□□ 2.94
ATG4D-212ENST00000590096 CDC42BPAQ5VT25 1732 aa33.42■■■□□ 2.94
ATG4D-212ENST00000590096 CDC42BPBQ9Y5S2 1711 aa33.41■■■□□ 2.94
ATG4D-212ENST00000590096 CCNB3Q8WWL7 1395 aa33.4■■■□□ 2.94
ATG4D-212ENST00000590096 KANK4Q5T7N3 995 aaPredicted RBP33.36■■■□□ 2.93
ATG4D-212ENST00000590096 GPATCH8Q9UKJ3 1502 aaKnown RBP33.36■■■□□ 2.93
ATG4D-212ENST00000590096 ADGRL1O94910 1474 aa33.36■■■□□ 2.93
ATG4D-212ENST00000590096 NCOA2Q15596 1464 aa33.36■■■□□ 2.93
ATG4D-212ENST00000590096 DENND4BO75064 1496 aaPredicted RBP33.32■■■□□ 2.92
ATG4D-212ENST00000590096 ITSN2Q9NZM3 1697 aa33.32■■■□□ 2.92
ATG4D-212ENST00000590096 SCAPERQ9BY12 1400 aa33.29■■■□□ 2.92
ATG4D-212ENST00000590096 RAPGEF3O95398 923 aa33.29■■■□□ 2.92
ATG4D-212ENST00000590096 CFDP1Q9UEE9 299 aaPredicted RBP33.29■■■□□ 2.92
ATG4D-212ENST00000590096 ZNF777Q9ULD5 760 aaPredicted RBP33.26■■■□□ 2.91
ATG4D-212ENST00000590096 FRMPD1Q5SYB0 1578 aa33.25■■■□□ 2.91
ATG4D-212ENST00000590096 RICTORQ6R327 1708 aa33.25■■■□□ 2.91
ATG4D-212ENST00000590096 ABCC1P33527 1531 aa33.22■■■□□ 2.91
ATG4D-212ENST00000590096 POGZQ7Z3K3 1410 aa33.21■■■□□ 2.91
ATG4D-212ENST00000590096 SAMD9LQ8IVG5 1584 aa33.2■■■□□ 2.91
ATG4D-212ENST00000590096 KDM4FA0A1W2PPD8 638 aa33.19■■■□□ 2.9
ATG4D-212ENST00000590096 PLEKHH2Q8IVE3 1493 aa33.17■■■□□ 2.9
ATG4D-212ENST00000590096 ZNF518AQ6AHZ1 1483 aa33.15■■■□□ 2.9
ATG4D-212ENST00000590096 ZMYM4Q5VZL5 1548 aa33.13■■■□□ 2.89
ATG4D-212ENST00000590096 SYCP2Q9BX26 1530 aa33.12■■■□□ 2.89
ATG4D-212ENST00000590096 ARHGEF12Q9NZN5 1544 aa33.12■■■□□ 2.89
ATG4D-212ENST00000590096 MYOM3Q5VTT5 1437 aa33.11■■■□□ 2.89
ATG4D-212ENST00000590096 KIAA1107Q9UPP5 1409 aa33.11■■■□□ 2.89
ATG4D-212ENST00000590096 AFAP1Q8N556 730 aa33.08■■■□□ 2.89
ATG4D-212ENST00000590096 TRAPPC8Q9Y2L5 1435 aa33.08■■■□□ 2.89
ATG4D-212ENST00000590096 MAGI2Q86UL8 1455 aa33.07■■■□□ 2.88
ATG4D-212ENST00000590096 KDM5CP41229 1560 aa33.07■■■□□ 2.88
ATG4D-212ENST00000590096 ZNF644Q9H582 1327 aaPredicted RBP33.06■■■□□ 2.88
ATG4D-212ENST00000590096 HNRNPMP52272 730 aaKnown RBP eCLIP33.06■■■□□ 2.88
ATG4D-212ENST00000590096 CAMSAP2Q08AD1 1489 aa33.05■■■□□ 2.88
ATG4D-212ENST00000590096 MIA2Q96PC5 1412 aa33.04■■■□□ 2.88
ATG4D-212ENST00000590096 ZFYVE16Q7Z3T8 1539 aa33.04■■■□□ 2.88
ATG4D-212ENST00000590096 ARHGEF40Q8TER5 1519 aa33.04■■■□□ 2.88
ATG4D-212ENST00000590096 MYT1LQ9UL68 1186 aa33.03■■■□□ 2.88
ATG4D-212ENST00000590096 HECW2Q9P2P5 1572 aa33.01■■■□□ 2.88
ATG4D-212ENST00000590096 YEATS2Q9ULM3 1422 aa32.98■■■□□ 2.87
ATG4D-212ENST00000590096 MBD5Q9P267 1494 aa32.96■■■□□ 2.87
ATG4D-212ENST00000590096 MLH3Q9UHC1 1453 aa32.96■■■□□ 2.87
ATG4D-212ENST00000590096 PPARGC1BQ86YN6 1023 aaKnown RBP32.94■■■□□ 2.86
ATG4D-212ENST00000590096 FGD6Q6ZV73 1430 aa32.94■■■□□ 2.86
ATG4D-212ENST00000590096 SPAG9O60271 1321 aaKnown RBP32.93■■■□□ 2.86
ATG4D-212ENST00000590096 PTPN23Q9H3S7 1636 aa32.92■■■□□ 2.86
ATG4D-212ENST00000590096 RSPH4AQ5TD94 716 aa32.91■■■□□ 2.86
ATG4D-212ENST00000590096 CCDC141Q6ZP82 1450 aa32.91■■■□□ 2.86
ATG4D-212ENST00000590096 ARHGEF5Q12774 1597 aa32.9■■■□□ 2.86
ATG4D-212ENST00000590096 KIDINS220Q9ULH0 1771 aa32.88■■■□□ 2.85
ATG4D-212ENST00000590096 ATP10AO60312 1499 aa32.88■■■□□ 2.85
ATG4D-212ENST00000590096 ABCA6Q8N139 1617 aa32.86■■■□□ 2.85
ATG4D-212ENST00000590096 DIP2CQ9Y2E4 1556 aa32.86■■■□□ 2.85
ATG4D-212ENST00000590096 ATP7AQ04656 1500 aa32.86■■■□□ 2.85
ATG4D-212ENST00000590096 C9orf84Q5VXU9 1444 aa32.85■■■□□ 2.85
ATG4D-212ENST00000590096 ARID4BQ4LE39 1312 aaPredicted RBP32.85■■■□□ 2.85
ATG4D-212ENST00000590096 INO80Q9ULG1 1556 aaPredicted RBP32.85■■■□□ 2.85
ATG4D-212ENST00000590096 TCOF1Q13428 1488 aaKnown RBP32.84■■■□□ 2.85
ATG4D-212ENST00000590096 TSPY4P0CV99 314 aa32.8■■■□□ 2.84
ATG4D-212ENST00000590096 TSPY10P0CW01 314 aa32.8■■■□□ 2.84
ATG4D-212ENST00000590096 RTEL1-TNFRSF6BF6WH68 1400 aa32.79■■■□□ 2.84
ATG4D-212ENST00000590096 REREQ9P2R6 1566 aa32.76■■■□□ 2.84
ATG4D-212ENST00000590096 FAM50AQ14320 339 aaKnown RBP32.75■■■□□ 2.83
ATG4D-212ENST00000590096 SIGLEC1Q9BZZ2 1709 aa32.74■■■□□ 2.83
ATG4D-212ENST00000590096 DNMT1P26358 1616 aaKnown RBP32.72■■■□□ 2.83
ATG4D-212ENST00000590096 BCORL1Q5H9F3 1711 aa32.71■■■□□ 2.83
ATG4D-212ENST00000590096 ADGBQ8N7X0 1667 aa32.71■■■□□ 2.83
ATG4D-212ENST00000590096 MAST1Q9Y2H9 1570 aa32.7■■■□□ 2.83
ATG4D-212ENST00000590096 DAPK1P53355 1430 aa32.69■■■□□ 2.82
ATG4D-212ENST00000590096 CROCC2H7BZ55 1655 aa32.69■■■□□ 2.82
ATG4D-212ENST00000590096 ABCC5O15440 1437 aa32.68■■■□□ 2.82
ATG4D-212ENST00000590096 A2MP01023 1474 aa32.67■■■□□ 2.82
ATG4D-212ENST00000590096 SHANK2Q9UPX8 1470 aa32.67■■■□□ 2.82
ATG4D-212ENST00000590096 AGLP35573 1532 aa32.65■■■□□ 2.82
ATG4D-212ENST00000590096 MLECQ14165 292 aa32.64■■■□□ 2.82
ATG4D-212ENST00000590096 ADAMTSL3P82987 1691 aa32.63■■■□□ 2.81
ATG4D-212ENST00000590096 PLXNC1O60486 1568 aa32.62■■■□□ 2.81
ATG4D-212ENST00000590096 DHX29Q7Z478 1369 aaKnown RBP32.58■■■□□ 2.81
ATG4D-212ENST00000590096 MADDQ8WXG6 1647 aa32.57■■■□□ 2.8
ATG4D-212ENST00000590096 RRBP1Q9P2E9 1410 aaKnown RBP32.57■■■□□ 2.8
ATG4D-212ENST00000590096 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.57■■■□□ 2.8
ATG4D-212ENST00000590096 CHIC2Q9UKJ5 165 aa32.54■■■□□ 2.8
ATG4D-212ENST00000590096 FER1L4A9Z1Z3 1794 aa32.53■■■□□ 2.8
ATG4D-212ENST00000590096 ANKRD30AQ9BXX3 1397 aa32.51■■■□□ 2.79
ATG4D-212ENST00000590096 RIMS1Q86UR5 1692 aaKnown RBP32.5■■■□□ 2.79
ATG4D-212ENST00000590096 KIF15Q9NS87 1388 aa32.49■■■□□ 2.79
ATG4D-212ENST00000590096 DUOX2Q9NRD8 1548 aa32.48■■■□□ 2.79
ATG4D-212ENST00000590096 RRP7BPQ9NSQ0 103 aa32.47■■■□□ 2.79
ATG4D-212ENST00000590096 ADGRL2O95490 1459 aa32.47■■■□□ 2.79
ATG4D-212ENST00000590096 ESF1Q9H501 851 aaKnown RBP32.46■■■□□ 2.79
ATG4D-212ENST00000590096 KIF3BO15066 747 aa32.45■■■□□ 2.79
ATG4D-212ENST00000590096 ITGAEP38570 1179 aa32.45■■■□□ 2.79
ATG4D-212ENST00000590096 NCOA1Q15788 1441 aa32.44■■■□□ 2.78
ATG4D-212ENST00000590096 PTPRMP28827 1452 aa32.44■■■□□ 2.78
ATG4D-212ENST00000590096 GGT6Q6P531 493 aa32.44■■■□□ 2.78
ATG4D-212ENST00000590096 PTPRKQ15262 1439 aa32.43■■■□□ 2.78
ATG4D-212ENST00000590096 EIF2AK4Q9P2K8 1649 aaKnown RBP32.42■■■□□ 2.78
ATG4D-212ENST00000590096 ERBINQ96RT1 1412 aa32.39■■■□□ 2.78
ATG4D-212ENST00000590096 CNTLNQ9NXG0 1405 aa32.36■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 380.1 ms