RNA–Protein interactions for RNA: ENST00000589253.1

TOMM40-204, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

TSL 3

Gene TOMM40, Length 207 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-204ENST00000589253 HECW1Q76N89 1606 aa18.99■□□□□ 0.63
TOMM40-204ENST00000589253 CERKQ8TCT0 537 aa18.96■□□□□ 0.63
TOMM40-204ENST00000589253 SCAPERQ9BY12 1400 aa18.96■□□□□ 0.63
TOMM40-204ENST00000589253 CDK13Q14004 1512 aaKnown RBP18.95■□□□□ 0.62
TOMM40-204ENST00000589253 SIGLEC1Q9BZZ2 1709 aa18.95■□□□□ 0.62
TOMM40-204ENST00000589253 PLCH2O75038 1416 aa18.95■□□□□ 0.62
TOMM40-204ENST00000589253 C9orf84Q5VXU9 1444 aa18.93■□□□□ 0.62
TOMM40-204ENST00000589253 ARHGAP35Q9NRY4 1499 aa18.93■□□□□ 0.62
TOMM40-204ENST00000589253 ATP1B4Q9UN42 357 aaPredicted RBP18.93■□□□□ 0.62
TOMM40-204ENST00000589253 ATP10AO60312 1499 aa18.92■□□□□ 0.62
TOMM40-204ENST00000589253 LOC105371045A0A1W2PR82 267 aa18.92■□□□□ 0.62
TOMM40-204ENST00000589253 PREX1Q8TCU6 1659 aa18.92■□□□□ 0.62
TOMM40-204ENST00000589253 MYO5CQ9NQX4 1742 aa18.91■□□□□ 0.62
TOMM40-204ENST00000589253 CDK11AQ9UQ88 783 aaPredicted RBP18.91■□□□□ 0.62
TOMM40-204ENST00000589253 EFCAB2Q5VUJ9 269 aa18.9■□□□□ 0.62
TOMM40-204ENST00000589253 ARHGEF12Q9NZN5 1544 aa18.9■□□□□ 0.62
TOMM40-204ENST00000589253 FMN1Q68DA7 1419 aa18.89■□□□□ 0.61
TOMM40-204ENST00000589253 MYT1LQ9UL68 1186 aa18.88■□□□□ 0.61
TOMM40-204ENST00000589253 DMRT2Q9Y5R5 561 aa18.88■□□□□ 0.61
TOMM40-204ENST00000589253 KIF14Q15058 1648 aa18.87■□□□□ 0.61
TOMM40-204ENST00000589253 ZNF518AQ6AHZ1 1483 aa18.87■□□□□ 0.61
TOMM40-204ENST00000589253 ARHGAP5Q13017 1502 aa18.84■□□□□ 0.61
TOMM40-204ENST00000589253 UHRF1BP1Q6BDS2 1440 aa18.84■□□□□ 0.61
TOMM40-204ENST00000589253 CLIP1P30622 1438 aa18.83■□□□□ 0.61
TOMM40-204ENST00000589253 CEBPAP49715 358 aaPredicted RBP18.82■□□□□ 0.6
TOMM40-204ENST00000589253 CEP162Q5TB80 1403 aa18.82■□□□□ 0.6
TOMM40-204ENST00000589253 ESF1Q9H501 851 aaKnown RBP18.81■□□□□ 0.6
TOMM40-204ENST00000589253 KDM5CP41229 1560 aa18.8■□□□□ 0.6
TOMM40-204ENST00000589253 LRRIQ1Q96JM4 1722 aa18.8■□□□□ 0.6
TOMM40-204ENST00000589253 TROQ12816 1431 aaPredicted RBP18.79■□□□□ 0.6
TOMM40-204ENST00000589253 AFAP1Q8N556 730 aa18.77■□□□□ 0.6
TOMM40-204ENST00000589253 DISP3Q9P2K9 1392 aa18.77■□□□□ 0.6
TOMM40-204ENST00000589253 REREQ9P2R6 1566 aa18.76■□□□□ 0.59
TOMM40-204ENST00000589253 DIP2CQ9Y2E4 1556 aa18.76■□□□□ 0.59
TOMM40-204ENST00000589253 STRCQ7RTU9 1775 aa18.76■□□□□ 0.59
TOMM40-204ENST00000589253 SETD1BQ9UPS6 1966 aaKnown RBP18.73■□□□□ 0.59
TOMM40-204ENST00000589253 C3P01024 1663 aa18.72■□□□□ 0.59
TOMM40-204ENST00000589253 MLH3Q9UHC1 1453 aa18.71■□□□□ 0.59
TOMM40-204ENST00000589253 ABCA6Q8N139 1617 aa18.71■□□□□ 0.59
TOMM40-204ENST00000589253 PTPRTO14522 1441 aa18.71■□□□□ 0.59
TOMM40-204ENST00000589253 CDC42BPBQ9Y5S2 1711 aa18.69■□□□□ 0.58
TOMM40-204ENST00000589253 PREX2Q70Z35 1606 aa18.69■□□□□ 0.58
TOMM40-204ENST00000589253 ABCC1P33527 1531 aa18.69■□□□□ 0.58
TOMM40-204ENST00000589253 AGLP35573 1532 aa18.69■□□□□ 0.58
TOMM40-204ENST00000589253 CNTLNQ9NXG0 1405 aa18.68■□□□□ 0.58
TOMM40-204ENST00000589253 TRAPPC8Q9Y2L5 1435 aa18.67■□□□□ 0.58
TOMM40-204ENST00000589253 CCDC18Q5T9S5 1454 aa18.67■□□□□ 0.58
TOMM40-204ENST00000589253 ITSN2Q9NZM3 1697 aa18.66■□□□□ 0.58
TOMM40-204ENST00000589253 SPATA31D1Q6ZQQ2 1576 aa18.65■□□□□ 0.58
TOMM40-204ENST00000589253 SOCS7O14512 581 aa18.64■□□□□ 0.57
TOMM40-204ENST00000589253 CASKIN1Q8WXD9 1431 aa18.64■□□□□ 0.57
TOMM40-204ENST00000589253 ILDR2Q71H61 639 aa18.63■□□□□ 0.57
TOMM40-204ENST00000589253 FYCO1Q9BQS8 1478 aa18.63■□□□□ 0.57
TOMM40-204ENST00000589253 IQSEC2Q5JU85 1478 aa18.62■□□□□ 0.57
TOMM40-204ENST00000589253 NCOA1Q15788 1441 aa18.61■□□□□ 0.57
TOMM40-204ENST00000589253 KIDINS220Q9ULH0 1771 aa18.6■□□□□ 0.57
TOMM40-204ENST00000589253 MROH2AA6NES4 1674 aa18.59■□□□□ 0.57
TOMM40-204ENST00000589253 NPATQ14207 1427 aa18.58■□□□□ 0.57
TOMM40-204ENST00000589253 CDC42BPAQ5VT25 1732 aa18.58■□□□□ 0.57
TOMM40-204ENST00000589253 ZNF777Q9ULD5 760 aaPredicted RBP18.58■□□□□ 0.56
TOMM40-204ENST00000589253 LTBP4Q8N2S1 1624 aa18.58■□□□□ 0.56
TOMM40-204ENST00000589253 VPS8Q8N3P4 1428 aa18.57■□□□□ 0.56
TOMM40-204ENST00000589253 CAMSAP1Q5T5Y3 1602 aa18.57■□□□□ 0.56
TOMM40-204ENST00000589253 SAMD9LQ8IVG5 1584 aa18.56■□□□□ 0.56
TOMM40-204ENST00000589253 SPAG9O60271 1321 aaKnown RBP18.55■□□□□ 0.56
TOMM40-204ENST00000589253 ZMYM3Q14202 1370 aa18.54■□□□□ 0.56
TOMM40-204ENST00000589253 SYCP2Q9BX26 1530 aa18.54■□□□□ 0.56
TOMM40-204ENST00000589253 SUPT6HQ7KZ85 1726 aaKnown RBP18.53■□□□□ 0.56
TOMM40-204ENST00000589253 ATP7AQ04656 1500 aa18.5■□□□□ 0.55
TOMM40-204ENST00000589253 PLEKHH2Q8IVE3 1493 aa18.5■□□□□ 0.55
TOMM40-204ENST00000589253 CLTCQ00610 1675 aaKnown RBP18.5■□□□□ 0.55
TOMM40-204ENST00000589253 MYO3AQ8NEV4 1616 aa18.49■□□□□ 0.55
TOMM40-204ENST00000589253 PKD2Q13563 968 aa18.49■□□□□ 0.55
TOMM40-204ENST00000589253 ZNF142P52746 1687 aaPredicted RBP18.49■□□□□ 0.55
TOMM40-204ENST00000589253 NCKAP5LQ9HCH0 1330 aa18.49■□□□□ 0.55
TOMM40-204ENST00000589253 UBAP1LF5GYI3 381 aa18.48■□□□□ 0.55
TOMM40-204ENST00000589253 HNRNPMP52272 730 aaKnown RBP eCLIP18.48■□□□□ 0.55
TOMM40-204ENST00000589253 TIAM1Q13009 1591 aa18.47■□□□□ 0.55
TOMM40-204ENST00000589253 A2MP01023 1474 aa18.47■□□□□ 0.55
TOMM40-204ENST00000589253 PLA2R1Q13018 1463 aa18.47■□□□□ 0.55
TOMM40-204ENST00000589253 CFDP1Q9UEE9 299 aaPredicted RBP18.47■□□□□ 0.55
TOMM40-204ENST00000589253 GPATCH8Q9UKJ3 1502 aaKnown RBP18.47■□□□□ 0.55
TOMM40-204ENST00000589253 ZNF335Q9H4Z2 1342 aaPredicted RBP18.47■□□□□ 0.55
TOMM40-204ENST00000589253 INO80Q9ULG1 1556 aaPredicted RBP18.47■□□□□ 0.55
TOMM40-204ENST00000589253 CEP170BQ9Y4F5 1589 aaPredicted RBP18.47■□□□□ 0.55
TOMM40-204ENST00000589253 KIAA1107Q9UPP5 1409 aa18.46■□□□□ 0.55
TOMM40-204ENST00000589253 CCNB3Q8WWL7 1395 aa18.45■□□□□ 0.54
TOMM40-204ENST00000589253 GGT6Q6P531 493 aa18.45■□□□□ 0.54
TOMM40-204ENST00000589253 PLXNC1O60486 1568 aa18.45■□□□□ 0.54
TOMM40-204ENST00000589253 PTPRKQ15262 1439 aa18.42■□□□□ 0.54
TOMM40-204ENST00000589253 ADGBQ8N7X0 1667 aa18.42■□□□□ 0.54
TOMM40-204ENST00000589253 PPP6R1Q9UPN7 881 aa18.42■□□□□ 0.54
TOMM40-204ENST00000589253 TCOF1Q13428 1488 aaKnown RBP18.41■□□□□ 0.54
TOMM40-204ENST00000589253 MTUS2Q5JR59 1369 aa18.4■□□□□ 0.54
TOMM40-204ENST00000589253 MAP3K1Q13233 1512 aa18.39■□□□□ 0.54
TOMM40-204ENST00000589253 EHBP1L1Q8N3D4 1523 aa18.39■□□□□ 0.54
TOMM40-204ENST00000589253 SCAF1Q9H7N4 1312 aaKnown RBP18.37■□□□□ 0.53
TOMM40-204ENST00000589253 A2ML1A8K2U0 1454 aa18.37■□□□□ 0.53
TOMM40-204ENST00000589253 DNMT1P26358 1616 aaKnown RBP18.34■□□□□ 0.53
TOMM40-204ENST00000589253 LRRC9Q6ZRR7 1453 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms