RNA–Protein interactions for RNA: ENST00000589223.5

AP3D1-206, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 2

Gene AP3D1, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-206ENST00000589223 GRIN2AQ12879 1464 aa16.85■□□□□ 0.29
AP3D1-206ENST00000589223 WDR62O43379 1518 aa16.84■□□□□ 0.29
AP3D1-206ENST00000589223 UACAQ9BZF9 1416 aa16.84■□□□□ 0.29
AP3D1-206ENST00000589223 WASHC2AQ641Q2 1341 aa16.83■□□□□ 0.29
AP3D1-206ENST00000589223 SUPT6HQ7KZ85 1726 aaKnown RBP16.82■□□□□ 0.28
AP3D1-206ENST00000589223 UGGT2Q9NYU1 1516 aa16.8■□□□□ 0.28
AP3D1-206ENST00000589223 EHBP1L1Q8N3D4 1523 aa16.79■□□□□ 0.28
AP3D1-206ENST00000589223 NUP153P49790 1475 aaKnown RBP16.79■□□□□ 0.28
AP3D1-206ENST00000589223 DENND4BO75064 1496 aaPredicted RBP16.79■□□□□ 0.28
AP3D1-206ENST00000589223 KIAA0586Q9BVV6 1533 aa16.78■□□□□ 0.28
AP3D1-206ENST00000589223 HNRNPMP52272 730 aaKnown RBP eCLIP16.78■□□□□ 0.282e-9■■■■■ 59.6
AP3D1-206ENST00000589223 CEP170Q5SW79 1584 aa16.77■□□□□ 0.28
AP3D1-206ENST00000589223 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.77■□□□□ 0.284e-10■■□□□ 13.5
AP3D1-206ENST00000589223 HECW1Q76N89 1606 aa16.77■□□□□ 0.27
AP3D1-206ENST00000589223 EIF4G2P78344 907 aaKnown RBP eCLIP16.75■□□□□ 0.27
AP3D1-206ENST00000589223 KIAA0556O60303 1618 aa16.75■□□□□ 0.27
AP3D1-206ENST00000589223 PKD2Q13563 968 aa16.74■□□□□ 0.27
AP3D1-206ENST00000589223 RGL3Q3MIN7 710 aa16.73■□□□□ 0.27
AP3D1-206ENST00000589223 TSHZ2Q9NRE2 1034 aa16.72■□□□□ 0.27
AP3D1-206ENST00000589223 CDK11AQ9UQ88 783 aaPredicted RBP16.72■□□□□ 0.27
AP3D1-206ENST00000589223 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.71■□□□□ 0.27
AP3D1-206ENST00000589223 ABCC5O15440 1437 aa16.71■□□□□ 0.27
AP3D1-206ENST00000589223 SALL2Q9Y467 1007 aaPredicted RBP16.71■□□□□ 0.26
AP3D1-206ENST00000589223 SYNJ2O15056 1496 aa16.69■□□□□ 0.26
AP3D1-206ENST00000589223 NEFLP07196 543 aa16.69■□□□□ 0.26
AP3D1-206ENST00000589223 DAPK1P53355 1430 aa16.68■□□□□ 0.26
AP3D1-206ENST00000589223 ARHGEF11O15085 1522 aa16.68■□□□□ 0.26
AP3D1-206ENST00000589223 MRS2Q9HD23 443 aa16.68■□□□□ 0.26
AP3D1-206ENST00000589223 PLEKHD1A6NEE1 506 aa16.67■□□□□ 0.26
AP3D1-206ENST00000589223 KIF14Q15058 1648 aa16.67■□□□□ 0.26
AP3D1-206ENST00000589223 TIMELESSQ9UNS1 1208 aa16.67■□□□□ 0.26
AP3D1-206ENST00000589223 RAPGEF6Q8TEU7 1601 aa16.66■□□□□ 0.26
AP3D1-206ENST00000589223 SENP3Q9H4L4 574 aaPredicted RBP16.66■□□□□ 0.26
AP3D1-206ENST00000589223 KDM5BQ9UGL1 1544 aa16.65■□□□□ 0.26
AP3D1-206ENST00000589223 PRKCSHP14314 528 aaPredicted RBP16.64■□□□□ 0.25
AP3D1-206ENST00000589223 MAGI1Q96QZ7 1491 aaPredicted RBP16.63■□□□□ 0.25
AP3D1-206ENST00000589223 KIF7Q2M1P5 1343 aa16.62■□□□□ 0.25
AP3D1-206ENST00000589223 DCAF11Q8TEB1 546 aa16.61■□□□□ 0.25
AP3D1-206ENST00000589223 NUP155O75694 1391 aa16.6■□□□□ 0.25
AP3D1-206ENST00000589223 CARMIL2Q6F5E8 1435 aa16.6■□□□□ 0.25
AP3D1-206ENST00000589223 ANKRD30BQ9BXX2 1392 aa16.6■□□□□ 0.25
AP3D1-206ENST00000589223 TCOF1Q13428 1488 aaKnown RBP16.6■□□□□ 0.25
AP3D1-206ENST00000589223 TROQ12816 1431 aaPredicted RBP16.59■□□□□ 0.25
AP3D1-206ENST00000589223 CCER2I3L3R5 266 aa16.58■□□□□ 0.25
AP3D1-206ENST00000589223 GPATCH8Q9UKJ3 1502 aaKnown RBP16.58■□□□□ 0.25
AP3D1-206ENST00000589223 CAMSAP2Q08AD1 1489 aa16.58■□□□□ 0.24
AP3D1-206ENST00000589223 TSPY4P0CV99 314 aa16.57■□□□□ 0.24
AP3D1-206ENST00000589223 TSPY10P0CW01 314 aa16.57■□□□□ 0.24
AP3D1-206ENST00000589223 MIA2Q96PC5 1412 aa16.57■□□□□ 0.24
AP3D1-206ENST00000589223 PRKRIP1Q9H875 184 aaPredicted RBP16.57■□□□□ 0.24
AP3D1-206ENST00000589223 ATP10BO94823 1461 aa16.57■□□□□ 0.24
AP3D1-206ENST00000589223 PTPRGP23470 1445 aa16.56■□□□□ 0.24
AP3D1-206ENST00000589223 NUP160Q12769 1436 aa16.56■□□□□ 0.24
AP3D1-206ENST00000589223 MYT1LQ9UL68 1186 aa16.55■□□□□ 0.24
AP3D1-206ENST00000589223 ERCC6L2Q5T890 1561 aa16.55■□□□□ 0.24
AP3D1-206ENST00000589223 CCDC7Q96M83 1385 aa16.55■□□□□ 0.24
AP3D1-206ENST00000589223 CARD11Q9BXL7 1154 aa16.54■□□□□ 0.24
AP3D1-206ENST00000589223 B4GALNT3Q6L9W6 998 aa16.53■□□□□ 0.24
AP3D1-206ENST00000589223 NCOA1Q15788 1441 aa16.53■□□□□ 0.24
AP3D1-206ENST00000589223 ST20-MTHFSA0A0A6YYL1 179 aa16.52■□□□□ 0.24
AP3D1-206ENST00000589223 NBPF1Q3BBV0 1214 aa16.51■□□□□ 0.23
AP3D1-206ENST00000589223 ANKRD50Q9ULJ7 1429 aa16.49■□□□□ 0.23
AP3D1-206ENST00000589223 AKNAQ7Z591 1439 aa16.49■□□□□ 0.23
AP3D1-206ENST00000589223 PZPP20742 1482 aa16.49■□□□□ 0.23
AP3D1-206ENST00000589223 GCC2Q8IWJ2 1684 aa16.48■□□□□ 0.23
AP3D1-206ENST00000589223 USP47Q96K76 1375 aa16.48■□□□□ 0.23
AP3D1-206ENST00000589223 DNMT1P26358 1616 aaKnown RBP16.47■□□□□ 0.23
AP3D1-206ENST00000589223 RPRD2Q5VT52 1461 aaKnown RBP16.47■□□□□ 0.23
AP3D1-206ENST00000589223 CNTLNQ9NXG0 1405 aa16.46■□□□□ 0.23
AP3D1-206ENST00000589223 ANKRD30AQ9BXX3 1397 aa16.46■□□□□ 0.23
AP3D1-206ENST00000589223 KIF15Q9NS87 1388 aa16.45■□□□□ 0.22
AP3D1-206ENST00000589223 CHD1O14646 1710 aa16.45■□□□□ 0.22
AP3D1-206ENST00000589223 TEX14Q8IWB6 1497 aa16.45■□□□□ 0.22
AP3D1-206ENST00000589223 RBM19Q9Y4C8 960 aaKnown RBP16.43■□□□□ 0.22
AP3D1-206ENST00000589223 C9orf84Q5VXU9 1444 aa16.43■□□□□ 0.22
AP3D1-206ENST00000589223 CC2D1BQ5T0F9 858 aaKnown RBP16.43■□□□□ 0.22
AP3D1-206ENST00000589223 ROCK1Q13464 1354 aa16.41■□□□□ 0.22
AP3D1-206ENST00000589223 ABCA8O94911 1581 aa16.41■□□□□ 0.22
AP3D1-206ENST00000589223 AFAP1Q8N556 730 aa16.4■□□□□ 0.22
AP3D1-206ENST00000589223 KIAA1107Q9UPP5 1409 aa16.39■□□□□ 0.21
AP3D1-206ENST00000589223 CDC42BPAQ5VT25 1732 aa16.39■□□□□ 0.21
AP3D1-206ENST00000589223 ERICH6Q7L0X2 663 aa16.39■□□□□ 0.21
AP3D1-206ENST00000589223 TMC1Q8TDI8 760 aa16.39■□□□□ 0.21
AP3D1-206ENST00000589223 ABCC10Q5T3U5 1492 aa16.38■□□□□ 0.21
AP3D1-206ENST00000589223 ROCK2O75116 1388 aaKnown RBP16.35■□□□□ 0.21
AP3D1-206ENST00000589223 SPATA31E1Q6ZUB1 1445 aa16.33■□□□□ 0.21
AP3D1-206ENST00000589223 ARHGAP5Q13017 1502 aa16.33■□□□□ 0.2
AP3D1-206ENST00000589223 BCORL1Q5H9F3 1711 aa16.32■□□□□ 0.2
AP3D1-206ENST00000589223 ITSN2Q9NZM3 1697 aa16.32■□□□□ 0.2
AP3D1-206ENST00000589223 SYCP2Q9BX26 1530 aa16.31■□□□□ 0.2
AP3D1-206ENST00000589223 TTC37Q6PGP7 1564 aa16.31■□□□□ 0.2
AP3D1-206ENST00000589223 SKAP1Q86WV1 359 aa16.3■□□□□ 0.2
AP3D1-206ENST00000589223 DHX29Q7Z478 1369 aaKnown RBP16.29■□□□□ 0.2
AP3D1-206ENST00000589223 MBD5Q9P267 1494 aa16.29■□□□□ 0.2
AP3D1-206ENST00000589223 PLEKHH2Q8IVE3 1493 aa16.29■□□□□ 0.2
AP3D1-206ENST00000589223 SAMD9LQ8IVG5 1584 aa16.29■□□□□ 0.2
AP3D1-206ENST00000589223 NUTM2DQ5VT03 806 aaPredicted RBP16.28■□□□□ 0.2
AP3D1-206ENST00000589223 CHGAP10645 457 aaKnown RBP16.28■□□□□ 0.2
AP3D1-206ENST00000589223 CDC42BPBQ9Y5S2 1711 aa16.27■□□□□ 0.2
AP3D1-206ENST00000589223 CDCA7LQ96GN5 454 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms