RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 MS4A4AQ96JQ5 239 aa10.55□□□□□ -0.72
SMAD4-207ENST00000589076 POTEB3A0JP26 581 aa10.5□□□□□ -0.73
SMAD4-207ENST00000589076 POTEBQ6S5H4 581 aa10.5□□□□□ -0.73
SMAD4-207ENST00000589076 TMEM92Q6UXU6 159 aa10.49□□□□□ -0.73
SMAD4-207ENST00000589076 KRTAP3-3Q9BYR6 98 aa10.49□□□□□ -0.73
SMAD4-207ENST00000589076 KRTAP3-2Q9BYR7 98 aa10.49□□□□□ -0.73
SMAD4-207ENST00000589076 VARS2Q5ST30 1063 aaKnown RBP10.48□□□□□ -0.73
SMAD4-207ENST00000589076 FBXO22Q8NEZ5 403 aa10.47□□□□□ -0.73
SMAD4-207ENST00000589076 MFRPQ9BY79 579 aa10.45□□□□□ -0.74
SMAD4-207ENST00000589076 GPR153Q6NV75 609 aa10.43□□□□□ -0.74
SMAD4-207ENST00000589076 RGL2O15211 777 aa10.41□□□□□ -0.74
SMAD4-207ENST00000589076 PKD2Q13563 968 aa10.41□□□□□ -0.74
SMAD4-207ENST00000589076 ZNF687Q8N1G0 1237 aa10.41□□□□□ -0.74
SMAD4-207ENST00000589076 ARSIQ5FYB1 569 aa10.4□□□□□ -0.74
SMAD4-207ENST00000589076 TMC2Q8TDI7 906 aa10.4□□□□□ -0.74
SMAD4-207ENST00000589076 C2orf72A6NCS6 295 aa10.36□□□□□ -0.75
SMAD4-207ENST00000589076 PTGER2P43116 358 aa10.36□□□□□ -0.75
SMAD4-207ENST00000589076 ZNF316A6NFI3 1004 aaPredicted RBP10.35□□□□□ -0.75
SMAD4-207ENST00000589076 RNF166Q96A37 237 aaPredicted RBP10.34□□□□□ -0.75
SMAD4-207ENST00000589076 MYT1LQ9UL68 1186 aa10.33□□□□□ -0.76
SMAD4-207ENST00000589076 KIF3CO14782 793 aa10.32□□□□□ -0.76
SMAD4-207ENST00000589076 ANKRD13DQ6ZTN6 518 aa10.3□□□□□ -0.76
SMAD4-207ENST00000589076 SLC34A2O95436 690 aa10.29□□□□□ -0.76
SMAD4-207ENST00000589076 KHSRPQ92945 711 aaKnown RBP eCLIP10.29□□□□□ -0.767e-7■■■□□ 16.1
SMAD4-207ENST00000589076 NUDT7P0C024 238 aa10.28□□□□□ -0.76
SMAD4-207ENST00000589076 PBX2P40425 430 aa10.28□□□□□ -0.76
SMAD4-207ENST00000589076 PCDHGA4Q9Y5G9 962 aa10.27□□□□□ -0.77
SMAD4-207ENST00000589076 PSDA5PKW4 1024 aaPredicted RBP10.25□□□□□ -0.77
SMAD4-207ENST00000589076 HS6ST3Q8IZP7 471 aa10.25□□□□□ -0.77
SMAD4-207ENST00000589076 RYDENQ9NUL5 291 aaKnown RBP10.25□□□□□ -0.77
SMAD4-207ENST00000589076 LSM11P83369 360 aaKnown RBP eCLIP10.24□□□□□ -0.77
SMAD4-207ENST00000589076 LHX6Q9UPM6 363 aa10.23□□□□□ -0.77
SMAD4-207ENST00000589076 TBC1D12O60347 775 aa10.22□□□□□ -0.77
SMAD4-207ENST00000589076 PPP1R37O75864 691 aa10.22□□□□□ -0.77
SMAD4-207ENST00000589076 CHGAP10645 457 aaKnown RBP10.22□□□□□ -0.77
SMAD4-207ENST00000589076 FOXK1P85037 733 aa10.18□□□□□ -0.78
SMAD4-207ENST00000589076 GPHNQ9NQX3 736 aaPredicted RBP10.17□□□□□ -0.78
SMAD4-207ENST00000589076 PLPP6Q8IY26 295 aa10.16□□□□□ -0.78
SMAD4-207ENST00000589076 PTCD2Q8WV60 388 aaKnown RBP10.16□□□□□ -0.78
SMAD4-207ENST00000589076 KCNH8Q96L42 1107 aa10.15□□□□□ -0.78
SMAD4-207ENST00000589076 ARHGAP33O14559 1287 aa10.14□□□□□ -0.79
SMAD4-207ENST00000589076 AXIN2Q9Y2T1 843 aa10.13□□□□□ -0.79
SMAD4-207ENST00000589076 PPP4R3BQ5MIZ7 849 aa10.12□□□□□ -0.79
SMAD4-207ENST00000589076 STAC3Q96MF2 364 aa10.11□□□□□ -0.79
SMAD4-207ENST00000589076 DSG2Q14126 1118 aa10.1□□□□□ -0.79
SMAD4-207ENST00000589076 ADGRD1Q6QNK2 874 aa10.08□□□□□ -0.8
SMAD4-207ENST00000589076 DNAJC5Q9H3Z4 198 aa10.08□□□□□ -0.8
SMAD4-207ENST00000589076 TK2O00142 265 aa10.06□□□□□ -0.8
SMAD4-207ENST00000589076 HCSTQ9UBK5 93 aa10.06□□□□□ -0.8
SMAD4-207ENST00000589076 POTEEQ6S8J3 1075 aa10.05□□□□□ -0.8
SMAD4-207ENST00000589076 KDM4FA0A1W2PPD8 638 aa10.04□□□□□ -0.8
SMAD4-207ENST00000589076 PDE4AP27815 886 aa10.03□□□□□ -0.8
SMAD4-207ENST00000589076 NKX1-1Q15270 411 aaPredicted RBP10.02□□□□□ -0.81
SMAD4-207ENST00000589076 DCAF8L2P0C7V8 631 aa10.01□□□□□ -0.81
SMAD4-207ENST00000589076 PPP1R15BQ5SWA1 713 aa10.01□□□□□ -0.81
SMAD4-207ENST00000589076 UPF1Q92900 1129 aaKnown RBP eCLIP10.01□□□□□ -0.81
SMAD4-207ENST00000589076 PSEN2P49810 448 aa10□□□□□ -0.81
SMAD4-207ENST00000589076 OXER1Q8TDS5 423 aa10□□□□□ -0.81
SMAD4-207ENST00000589076 KCNK17Q96T54 332 aa9.99□□□□□ -0.81
SMAD4-207ENST00000589076 CRISPLD2Q9H0B8 497 aa9.99□□□□□ -0.81
SMAD4-207ENST00000589076 ZNF454Q8N9F8 522 aa9.98□□□□□ -0.81
SMAD4-207ENST00000589076 DMRTA1Q5VZB9 504 aa9.97□□□□□ -0.81
SMAD4-207ENST00000589076 PLA2G2EQ9NZK7 142 aa9.97□□□□□ -0.81
SMAD4-207ENST00000589076 HRO43593 1189 aa9.94□□□□□ -0.82
SMAD4-207ENST00000589076 DDX27Q96GQ7 796 aaKnown RBP9.94□□□□□ -0.82
SMAD4-207ENST00000589076 PTPREP23469 700 aa9.93□□□□□ -0.82
SMAD4-207ENST00000589076 KCTD12Q96CX2 325 aaKnown RBP9.93□□□□□ -0.82
SMAD4-207ENST00000589076 LARP6Q9BRS8 491 aaKnown RBP9.93□□□□□ -0.82
SMAD4-207ENST00000589076 MAP3K9P80192 1104 aa9.92□□□□□ -0.82
SMAD4-207ENST00000589076 BCL2L12Q9HB09 334 aa9.92□□□□□ -0.82
SMAD4-207ENST00000589076 NCKAP5LQ9HCH0 1330 aa9.9□□□□□ -0.82
SMAD4-207ENST00000589076 GOLGA8CPA6NN73 597 aa9.9□□□□□ -0.82
SMAD4-207ENST00000589076 GTPBP6O43824 516 aaPredicted RBP9.9□□□□□ -0.82
SMAD4-207ENST00000589076 EVI5O60447 810 aa9.9□□□□□ -0.82
SMAD4-207ENST00000589076 JPH4Q96JJ6 628 aa9.89□□□□□ -0.83
SMAD4-207ENST00000589076 VPS9D1Q9Y2B5 631 aa9.89□□□□□ -0.83
SMAD4-207ENST00000589076 FOSBP53539 338 aa9.88□□□□□ -0.83
SMAD4-207ENST00000589076 SLC4A5Q9BY07 1137 aa9.88□□□□□ -0.83
SMAD4-207ENST00000589076 ZDHHC16Q969W1 377 aa9.87□□□□□ -0.83
SMAD4-207ENST00000589076 ANO8Q9HCE9 1232 aaPredicted RBP9.87□□□□□ -0.83
SMAD4-207ENST00000589076 MRPL50Q8N5N7 158 aaKnown RBP9.85□□□□□ -0.83
SMAD4-207ENST00000589076 NBPF3Q9H094 633 aa9.84□□□□□ -0.83
SMAD4-207ENST00000589076 PTPN5P54829 565 aa9.83□□□□□ -0.84
SMAD4-207ENST00000589076 MFSD10Q14728 455 aa9.83□□□□□ -0.84
SMAD4-207ENST00000589076 WNT2BQ93097 391 aa9.8□□□□□ -0.84
SMAD4-207ENST00000589076 ZBED2Q9BTP6 218 aa9.8□□□□□ -0.84
SMAD4-207ENST00000589076 FBXW7Q969H0 707 aa9.79□□□□□ -0.84
SMAD4-207ENST00000589076 ADAM33Q9BZ11 813 aa9.79□□□□□ -0.84
SMAD4-207ENST00000589076 BHMG1C9JSJ3 638 aaPredicted RBP9.77□□□□□ -0.85
SMAD4-207ENST00000589076 PPP1R3GB7ZBB8 358 aa9.76□□□□□ -0.85
SMAD4-207ENST00000589076 THSD4Q6ZMP0 1018 aa9.76□□□□□ -0.85
SMAD4-207ENST00000589076 TYW1BQ6NUM6 668 aa9.75□□□□□ -0.85
SMAD4-207ENST00000589076 EMILIN3Q9NT22 766 aa9.75□□□□□ -0.85
SMAD4-207ENST00000589076 PHF14O94880 888 aa9.74□□□□□ -0.85
SMAD4-207ENST00000589076 PCDHGA10Q9Y5H3 936 aa9.74□□□□□ -0.85
SMAD4-207ENST00000589076 RABGEF1Q9UJ41 708 aa9.73□□□□□ -0.85
SMAD4-207ENST00000589076 ANKK1Q8NFD2 765 aa9.72□□□□□ -0.85
SMAD4-207ENST00000589076 EPAS1Q99814 870 aa9.71□□□□□ -0.86
SMAD4-207ENST00000589076 IFFO2Q5TF58 517 aa9.7□□□□□ -0.86
SMAD4-207ENST00000589076 RGS20O76081 388 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms