RNA–Protein interactions for RNA: ENST00000588361.1

KDM4B-206, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-206ENST00000588361 ARHGEF11O15085 1522 aa21.24■□□□□ 0.99
KDM4B-206ENST00000588361 KDM5BQ9UGL1 1544 aa21.23■□□□□ 0.99
KDM4B-206ENST00000588361 NBPF8Q3BBV2 869 aa21.23■□□□□ 0.99
KDM4B-206ENST00000588361 FAM9BQ8IZU0 186 aa21.23■□□□□ 0.99
KDM4B-206ENST00000588361 TCOF1Q13428 1488 aaKnown RBP21.2■□□□□ 0.99
KDM4B-206ENST00000588361 CDK11AQ9UQ88 783 aaPredicted RBP21.2■□□□□ 0.98
KDM4B-206ENST00000588361 PBRM1Q86U86 1689 aa21.19■□□□□ 0.98
KDM4B-206ENST00000588361 CHMP7Q8WUX9 453 aaPredicted RBP21.19■□□□□ 0.98
KDM4B-206ENST00000588361 CFDP1Q9UEE9 299 aaPredicted RBP21.19■□□□□ 0.98
KDM4B-206ENST00000588361 MRC2Q9UBG0 1479 aa21.19■□□□□ 0.98
KDM4B-206ENST00000588361 MIA2Q96PC5 1412 aa21.18■□□□□ 0.98
KDM4B-206ENST00000588361 ADAMTS12P58397 1594 aa21.18■□□□□ 0.98
KDM4B-206ENST00000588361 WDR62O43379 1518 aa21.16■□□□□ 0.98
KDM4B-206ENST00000588361 DAPK1P53355 1430 aa21.15■□□□□ 0.98
KDM4B-206ENST00000588361 ABCC5O15440 1437 aa21.14■□□□□ 0.97
KDM4B-206ENST00000588361 SENP3-EIF4A1A0A087X0R7 540 aa21.14■□□□□ 0.97
KDM4B-206ENST00000588361 PRG4Q92954 1404 aaPredicted RBP21.14■□□□□ 0.97
KDM4B-206ENST00000588361 MRS2Q9HD23 443 aa21.13■□□□□ 0.97
KDM4B-206ENST00000588361 PRKCSHP14314 528 aaPredicted RBP21.12■□□□□ 0.97
KDM4B-206ENST00000588361 ANKRD30BQ9BXX2 1392 aa21.11■□□□□ 0.97
KDM4B-206ENST00000588361 NUP153P49790 1475 aaKnown RBP21.1■□□□□ 0.97
KDM4B-206ENST00000588361 DISP1Q96F81 1524 aa21.09■□□□□ 0.97
KDM4B-206ENST00000588361 PRKRIP1Q9H875 184 aaPredicted RBP21.09■□□□□ 0.97
KDM4B-206ENST00000588361 KIAA0586Q9BVV6 1533 aa21.08■□□□□ 0.97
KDM4B-206ENST00000588361 CCDC7Q96M83 1385 aa21.08■□□□□ 0.97
KDM4B-206ENST00000588361 GCC2Q8IWJ2 1684 aa21.08■□□□□ 0.96
KDM4B-206ENST00000588361 AKNAQ7Z591 1439 aa21.07■□□□□ 0.96
KDM4B-206ENST00000588361 IFT140Q96RY7 1462 aa21.06■□□□□ 0.96
KDM4B-206ENST00000588361 PKD2Q13563 968 aa21.06■□□□□ 0.96
KDM4B-206ENST00000588361 PLB1Q6P1J6 1458 aa21.06■□□□□ 0.96
KDM4B-206ENST00000588361 CNTLNQ9NXG0 1405 aa21.05■□□□□ 0.96
KDM4B-206ENST00000588361 KIF7Q2M1P5 1343 aa21.05■□□□□ 0.96
KDM4B-206ENST00000588361 DEKP35659 375 aaKnown RBP21.04■□□□□ 0.96
KDM4B-206ENST00000588361 FANCIQ9NVI1 1328 aa21.03■□□□□ 0.96
KDM4B-206ENST00000588361 JPH4Q96JJ6 628 aa21.02■□□□□ 0.96
KDM4B-206ENST00000588361 ROCK1Q13464 1354 aa21.02■□□□□ 0.96
KDM4B-206ENST00000588361 GRIN2AQ12879 1464 aa21.02■□□□□ 0.96
KDM4B-206ENST00000588361 KIAA0556O60303 1618 aa21.02■□□□□ 0.96
KDM4B-206ENST00000588361 RPRD2Q5VT52 1461 aaKnown RBP21.02■□□□□ 0.96
KDM4B-206ENST00000588361 KDM2AQ9Y2K7 1162 aa21.01■□□□□ 0.95
KDM4B-206ENST00000588361 ERCC6Q03468 1493 aa21.01■□□□□ 0.95
KDM4B-206ENST00000588361 NCOA1Q15788 1441 aa21■□□□□ 0.95
KDM4B-206ENST00000588361 NBR1Q14596 966 aa20.99■□□□□ 0.95
KDM4B-206ENST00000588361 PLEKHD1A6NEE1 506 aa20.97■□□□□ 0.95
KDM4B-206ENST00000588361 TROQ12816 1431 aaPredicted RBP20.97■□□□□ 0.95
KDM4B-206ENST00000588361 RAPGEF6Q8TEU7 1601 aa20.97■□□□□ 0.95
KDM4B-206ENST00000588361 CAMSAP2Q08AD1 1489 aa20.95■□□□□ 0.94
KDM4B-206ENST00000588361 TEX14Q8IWB6 1497 aa20.95■□□□□ 0.94
KDM4B-206ENST00000588361 DNMT1P26358 1616 aaKnown RBP20.94■□□□□ 0.94
KDM4B-206ENST00000588361 HNRNPMP52272 730 aaKnown RBP eCLIP20.93■□□□□ 0.943e-7■■■■□ 23.3
KDM4B-206ENST00000588361 GPATCH8Q9UKJ3 1502 aaKnown RBP20.93■□□□□ 0.94
KDM4B-206ENST00000588361 EIF4G3O43432 1585 aaKnown RBP20.92■□□□□ 0.94
KDM4B-206ENST00000588361 NUP155O75694 1391 aa20.91■□□□□ 0.94
KDM4B-206ENST00000588361 PZPP20742 1482 aa20.91■□□□□ 0.94
KDM4B-206ENST00000588361 B4GALNT3Q6L9W6 998 aa20.91■□□□□ 0.94
KDM4B-206ENST00000588361 TSPY4P0CV99 314 aa20.9■□□□□ 0.94
KDM4B-206ENST00000588361 TSPY10P0CW01 314 aa20.9■□□□□ 0.94
KDM4B-206ENST00000588361 ANKRD30AQ9BXX3 1397 aa20.89■□□□□ 0.94
KDM4B-206ENST00000588361 ANO8Q9HCE9 1232 aaPredicted RBP20.89■□□□□ 0.94
KDM4B-206ENST00000588361 USP47Q96K76 1375 aa20.89■□□□□ 0.93
KDM4B-206ENST00000588361 SPATA31E1Q6ZUB1 1445 aa20.88■□□□□ 0.93
KDM4B-206ENST00000588361 KIF14Q15058 1648 aa20.88■□□□□ 0.93
KDM4B-206ENST00000588361 CARD11Q9BXL7 1154 aa20.88■□□□□ 0.93
KDM4B-206ENST00000588361 CARMIL2Q6F5E8 1435 aa20.87■□□□□ 0.93
KDM4B-206ENST00000588361 ANKRD50Q9ULJ7 1429 aa20.87■□□□□ 0.93
KDM4B-206ENST00000588361 KIAA1107Q9UPP5 1409 aa20.86■□□□□ 0.93
KDM4B-206ENST00000588361 DCAF11Q8TEB1 546 aa20.86■□□□□ 0.93
KDM4B-206ENST00000588361 CEP170Q5SW79 1584 aa20.85■□□□□ 0.93
KDM4B-206ENST00000588361 PAK3O75914 559 aaPredicted RBP20.84■□□□□ 0.93
KDM4B-206ENST00000588361 ZBED9Q6R2W3 1325 aa20.83■□□□□ 0.93
KDM4B-206ENST00000588361 PPP4R2Q9NY27 417 aa20.83■□□□□ 0.92
KDM4B-206ENST00000588361 SYNJ2O15056 1496 aa20.83■□□□□ 0.92
KDM4B-206ENST00000588361 RGL3Q3MIN7 710 aa20.82■□□□□ 0.92
KDM4B-206ENST00000588361 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.82■□□□□ 0.925e-6■■■□□ 15.3
KDM4B-206ENST00000588361 ST20-MTHFSA0A0A6YYL1 179 aa20.81■□□□□ 0.92
KDM4B-206ENST00000588361 MAGI1Q96QZ7 1491 aaPredicted RBP20.79■□□□□ 0.92
KDM4B-206ENST00000588361 TMC1Q8TDI8 760 aa20.79■□□□□ 0.92
KDM4B-206ENST00000588361 SALL2Q9Y467 1007 aaPredicted RBP20.78■□□□□ 0.92
KDM4B-206ENST00000588361 C9orf84Q5VXU9 1444 aa20.77■□□□□ 0.92
KDM4B-206ENST00000588361 DHX29Q7Z478 1369 aaKnown RBP20.76■□□□□ 0.91
KDM4B-206ENST00000588361 ATP10BO94823 1461 aa20.75■□□□□ 0.91
KDM4B-206ENST00000588361 KIF15Q9NS87 1388 aa20.74■□□□□ 0.91
KDM4B-206ENST00000588361 NOP58Q9Y2X3 529 aaKnown RBP20.74■□□□□ 0.91
KDM4B-206ENST00000588361 RTN4Q9NQC3 1192 aaKnown RBP20.72■□□□□ 0.91
KDM4B-206ENST00000588361 ITSN2Q9NZM3 1697 aa20.7■□□□□ 0.9
KDM4B-206ENST00000588361 ADGRL2O95490 1459 aa20.7■□□□□ 0.9
KDM4B-206ENST00000588361 BCORL1Q5H9F3 1711 aa20.7■□□□□ 0.9
KDM4B-206ENST00000588361 CCDC136Q96JN2 1154 aa20.69■□□□□ 0.9
KDM4B-206ENST00000588361 NUP160Q12769 1436 aa20.69■□□□□ 0.9
KDM4B-206ENST00000588361 PTPRGP23470 1445 aa20.69■□□□□ 0.9
KDM4B-206ENST00000588361 MBD5Q9P267 1494 aa20.68■□□□□ 0.9
KDM4B-206ENST00000588361 MYT1LQ9UL68 1186 aa20.67■□□□□ 0.9
KDM4B-206ENST00000588361 PNISRQ8TF01 805 aaKnown RBP20.67■□□□□ 0.9
KDM4B-206ENST00000588361 ROCK2O75116 1388 aaKnown RBP20.67■□□□□ 0.9
KDM4B-206ENST00000588361 NBPF1Q3BBV0 1214 aa20.67■□□□□ 0.9
KDM4B-206ENST00000588361 ERICH6BQ5W0A0 696 aa20.67■□□□□ 0.9
KDM4B-206ENST00000588361 NUDCQ9Y266 331 aa20.66■□□□□ 0.9
KDM4B-206ENST00000588361 ADGBQ8N7X0 1667 aa20.65■□□□□ 0.9
KDM4B-206ENST00000588361 ABCC10Q5T3U5 1492 aa20.64■□□□□ 0.9
KDM4B-206ENST00000588361 IL27Q8NEV9 243 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms