RNA–Protein interactions for RNA: ENST00000588190.1

SMAD7-206, Transcript of SMAD family member 7, humanhuman

TSL 5

Gene SMAD7, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-206ENST00000588190 FBXO41Q8TF61 875 aa23.1■■□□□ 1.29
SMAD7-206ENST00000588190 PCF11O94913 1555 aaKnown RBP23.09■■□□□ 1.29
SMAD7-206ENST00000588190 PLCH2O75038 1416 aa23.08■■□□□ 1.29
SMAD7-206ENST00000588190 CHIC1Q5VXU3 224 aa23.08■■□□□ 1.29
SMAD7-206ENST00000588190 HECW1Q76N89 1606 aa23.08■■□□□ 1.28
SMAD7-206ENST00000588190 LMTK3Q96Q04 1460 aa23.05■■□□□ 1.28
SMAD7-206ENST00000588190 ARHGAP35Q9NRY4 1499 aa23.05■■□□□ 1.28
SMAD7-206ENST00000588190 ZMYM4Q5VZL5 1548 aa23.04■■□□□ 1.28
SMAD7-206ENST00000588190 MAGI2Q86UL8 1455 aa23.04■■□□□ 1.28
SMAD7-206ENST00000588190 MYO5CQ9NQX4 1742 aa23.02■■□□□ 1.28
SMAD7-206ENST00000588190 CLIP1P30622 1438 aa23■■□□□ 1.27
SMAD7-206ENST00000588190 ARHGAP5Q13017 1502 aa23■■□□□ 1.27
SMAD7-206ENST00000588190 KIF14Q15058 1648 aa22.99■■□□□ 1.27
SMAD7-206ENST00000588190 SIGLEC1Q9BZZ2 1709 aa22.99■■□□□ 1.27
SMAD7-206ENST00000588190 AFAP1Q8N556 730 aa22.98■■□□□ 1.27
SMAD7-206ENST00000588190 FER1L4A9Z1Z3 1794 aa22.98■■□□□ 1.27
SMAD7-206ENST00000588190 ATP10AO60312 1499 aa22.98■■□□□ 1.27
SMAD7-206ENST00000588190 TROQ12816 1431 aaPredicted RBP22.96■■□□□ 1.27
SMAD7-206ENST00000588190 CEBPAP49715 358 aaPredicted RBP22.95■■□□□ 1.26
SMAD7-206ENST00000588190 C9orf84Q5VXU9 1444 aa22.95■■□□□ 1.26
SMAD7-206ENST00000588190 ESF1Q9H501 851 aaKnown RBP22.91■■□□□ 1.26
SMAD7-206ENST00000588190 ZNF518AQ6AHZ1 1483 aa22.91■■□□□ 1.26
SMAD7-206ENST00000588190 ZNF777Q9ULD5 760 aaPredicted RBP22.88■■□□□ 1.25
SMAD7-206ENST00000588190 LRRIQ1Q96JM4 1722 aa22.87■■□□□ 1.25
SMAD7-206ENST00000588190 ARHGEF12Q9NZN5 1544 aa22.85■■□□□ 1.25
SMAD7-206ENST00000588190 CERKQ8TCT0 537 aa22.83■■□□□ 1.25
SMAD7-206ENST00000588190 CDC42BPBQ9Y5S2 1711 aa22.82■■□□□ 1.24
SMAD7-206ENST00000588190 CASKIN1Q8WXD9 1431 aa22.82■■□□□ 1.24
SMAD7-206ENST00000588190 CCDC18Q5T9S5 1454 aa22.81■■□□□ 1.24
SMAD7-206ENST00000588190 PREX1Q8TCU6 1659 aa22.78■■□□□ 1.24
SMAD7-206ENST00000588190 KDM5CP41229 1560 aa22.78■■□□□ 1.24
SMAD7-206ENST00000588190 TRAPPC8Q9Y2L5 1435 aa22.78■■□□□ 1.24
SMAD7-206ENST00000588190 DIP2CQ9Y2E4 1556 aa22.77■■□□□ 1.24
SMAD7-206ENST00000588190 UHRF1BP1Q6BDS2 1440 aa22.76■■□□□ 1.23
SMAD7-206ENST00000588190 PREX2Q70Z35 1606 aa22.76■■□□□ 1.23
SMAD7-206ENST00000588190 DMRT2Q9Y5R5 561 aa22.76■■□□□ 1.23
SMAD7-206ENST00000588190 ABCA6Q8N139 1617 aa22.74■■□□□ 1.23
SMAD7-206ENST00000588190 MLH3Q9UHC1 1453 aa22.73■■□□□ 1.23
SMAD7-206ENST00000588190 ABCC1P33527 1531 aa22.72■■□□□ 1.23
SMAD7-206ENST00000588190 HNRNPMP52272 730 aaKnown RBP eCLIP22.72■■□□□ 1.232e-6■■□□□ 12.3
SMAD7-206ENST00000588190 ITSN2Q9NZM3 1697 aa22.71■■□□□ 1.23
SMAD7-206ENST00000588190 SETD1BQ9UPS6 1966 aaKnown RBP22.71■■□□□ 1.23
SMAD7-206ENST00000588190 SPAG9O60271 1321 aaKnown RBP22.7■■□□□ 1.22
SMAD7-206ENST00000588190 FYCO1Q9BQS8 1478 aa22.7■■□□□ 1.22
SMAD7-206ENST00000588190 CDC42BPAQ5VT25 1732 aa22.7■■□□□ 1.22
SMAD7-206ENST00000588190 CFDP1Q9UEE9 299 aaPredicted RBP22.68■■□□□ 1.22
SMAD7-206ENST00000588190 C3P01024 1663 aa22.67■■□□□ 1.22
SMAD7-206ENST00000588190 REREQ9P2R6 1566 aa22.66■■□□□ 1.22
SMAD7-206ENST00000588190 KIDINS220Q9ULH0 1771 aa22.65■■□□□ 1.22
SMAD7-206ENST00000588190 CCNB3Q8WWL7 1395 aa22.63■■□□□ 1.21
SMAD7-206ENST00000588190 AGLP35573 1532 aa22.63■■□□□ 1.21
SMAD7-206ENST00000588190 SYCP2Q9BX26 1530 aa22.63■■□□□ 1.21
SMAD7-206ENST00000588190 STRCQ7RTU9 1775 aa22.63■■□□□ 1.21
SMAD7-206ENST00000588190 MTUS2Q5JR59 1369 aa22.63■■□□□ 1.21
SMAD7-206ENST00000588190 GPATCH8Q9UKJ3 1502 aaKnown RBP22.62■■□□□ 1.21
SMAD7-206ENST00000588190 SAMD9LQ8IVG5 1584 aa22.61■■□□□ 1.21
SMAD7-206ENST00000588190 SUPT6HQ7KZ85 1726 aaKnown RBP22.6■■□□□ 1.21
SMAD7-206ENST00000588190 CNTLNQ9NXG0 1405 aa22.6■■□□□ 1.21
SMAD7-206ENST00000588190 GGT6Q6P531 493 aa22.6■■□□□ 1.21
SMAD7-206ENST00000588190 ZMYM3Q14202 1370 aa22.56■■□□□ 1.2
SMAD7-206ENST00000588190 PLEKHH2Q8IVE3 1493 aa22.54■■□□□ 1.2
SMAD7-206ENST00000588190 ATP7AQ04656 1500 aa22.53■■□□□ 1.2
SMAD7-206ENST00000588190 ZNF644Q9H582 1327 aaPredicted RBP22.53■■□□□ 1.2
SMAD7-206ENST00000588190 PTPRTO14522 1441 aa22.52■■□□□ 1.2
SMAD7-206ENST00000588190 A2MP01023 1474 aa22.51■■□□□ 1.19
SMAD7-206ENST00000588190 NCKAP5LQ9HCH0 1330 aa22.51■■□□□ 1.19
SMAD7-206ENST00000588190 KIAA1107Q9UPP5 1409 aa22.5■■□□□ 1.19
SMAD7-206ENST00000588190 DISP3Q9P2K9 1392 aa22.5■■□□□ 1.19
SMAD7-206ENST00000588190 CLTCQ00610 1675 aaKnown RBP22.49■■□□□ 1.19
SMAD7-206ENST00000588190 CAMSAP1Q5T5Y3 1602 aa22.48■■□□□ 1.19
SMAD7-206ENST00000588190 NCOA1Q15788 1441 aa22.48■■□□□ 1.19
SMAD7-206ENST00000588190 NPATQ14207 1427 aa22.47■■□□□ 1.19
SMAD7-206ENST00000588190 MROH2AA6NES4 1674 aa22.46■■□□□ 1.19
SMAD7-206ENST00000588190 INO80Q9ULG1 1556 aaPredicted RBP22.44■■□□□ 1.18
SMAD7-206ENST00000588190 EHBP1L1Q8N3D4 1523 aa22.41■■□□□ 1.18
SMAD7-206ENST00000588190 TIAM1Q13009 1591 aa22.41■■□□□ 1.18
SMAD7-206ENST00000588190 KIF3BO15066 747 aa22.4■■□□□ 1.18
SMAD7-206ENST00000588190 CEP162Q5TB80 1403 aa22.4■■□□□ 1.18
SMAD7-206ENST00000588190 ADGBQ8N7X0 1667 aa22.39■■□□□ 1.18
SMAD7-206ENST00000588190 ZNF335Q9H4Z2 1342 aaPredicted RBP22.39■■□□□ 1.18
SMAD7-206ENST00000588190 PLXNC1O60486 1568 aa22.39■■□□□ 1.18
SMAD7-206ENST00000588190 PKD2Q13563 968 aa22.38■■□□□ 1.17
SMAD7-206ENST00000588190 PPP6R1Q9UPN7 881 aa22.38■■□□□ 1.17
SMAD7-206ENST00000588190 PTPRKQ15262 1439 aa22.38■■□□□ 1.17
SMAD7-206ENST00000588190 UBAP1LF5GYI3 381 aa22.37■■□□□ 1.17
SMAD7-206ENST00000588190 LTBP4Q8N2S1 1624 aa22.37■■□□□ 1.17
SMAD7-206ENST00000588190 MYO3AQ8NEV4 1616 aa22.36■■□□□ 1.17
SMAD7-206ENST00000588190 MBD5Q9P267 1494 aa22.34■■□□□ 1.17
SMAD7-206ENST00000588190 CEP170BQ9Y4F5 1589 aaPredicted RBP22.34■■□□□ 1.17
SMAD7-206ENST00000588190 DHX29Q7Z478 1369 aaKnown RBP22.34■■□□□ 1.17
SMAD7-206ENST00000588190 WASHC2CQ9Y4E1 1318 aa22.33■■□□□ 1.17
SMAD7-206ENST00000588190 FBXO31Q5XUX0 539 aaPredicted RBP22.33■■□□□ 1.17
SMAD7-206ENST00000588190 ILDR2Q71H61 639 aa22.33■■□□□ 1.17
SMAD7-206ENST00000588190 TSPY4P0CV99 314 aa22.32■■□□□ 1.16
SMAD7-206ENST00000588190 TSPY10P0CW01 314 aa22.32■■□□□ 1.16
SMAD7-206ENST00000588190 RTEL1-TNFRSF6BF6WH68 1400 aa22.31■■□□□ 1.16
SMAD7-206ENST00000588190 NCOA2Q15596 1464 aa22.31■■□□□ 1.16
SMAD7-206ENST00000588190 SCAF1Q9H7N4 1312 aaKnown RBP22.31■■□□□ 1.16
SMAD7-206ENST00000588190 RSPH4AQ5TD94 716 aa22.3■■□□□ 1.16
SMAD7-206ENST00000588190 CAMSAP2Q08AD1 1489 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms