RNA–Protein interactions for RNA: ENST00000588136.5

TCF3-212, Transcript of transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TCF3, Length 2,658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-212ENST00000588136 FBLN2P98095 1184 aa23.33■■□□□ 1.32
TCF3-212ENST00000588136 ANP32EQ9BTT0 268 aa23.33■■□□□ 1.32
TCF3-212ENST00000588136 DAPK1P53355 1430 aa23.32■■□□□ 1.32
TCF3-212ENST00000588136 ZNF777Q9ULD5 760 aaPredicted RBP23.32■■□□□ 1.32
TCF3-212ENST00000588136 MIA2Q96PC5 1412 aa23.32■■□□□ 1.32
TCF3-212ENST00000588136 NUP153P49790 1475 aaKnown RBP23.31■■□□□ 1.32
TCF3-212ENST00000588136 SLC4A1APQ9BWU0 796 aaKnown RBP23.3■■□□□ 1.32
TCF3-212ENST00000588136 ABCC5O15440 1437 aa23.3■■□□□ 1.32
TCF3-212ENST00000588136 KIAA0556O60303 1618 aa23.29■■□□□ 1.32
TCF3-212ENST00000588136 PRG4Q92954 1404 aaPredicted RBP23.28■■□□□ 1.32
TCF3-212ENST00000588136 AKNAQ7Z591 1439 aa23.26■■□□□ 1.31
TCF3-212ENST00000588136 ZNF326Q5BKZ1 582 aaKnown RBP23.25■■□□□ 1.31
TCF3-212ENST00000588136 ANKRD30BQ9BXX2 1392 aa23.24■■□□□ 1.31
TCF3-212ENST00000588136 FAM9BQ8IZU0 186 aa23.24■■□□□ 1.31
TCF3-212ENST00000588136 KIAA0586Q9BVV6 1533 aa23.23■■□□□ 1.31
TCF3-212ENST00000588136 ERCC6Q03468 1493 aa23.23■■□□□ 1.31
TCF3-212ENST00000588136 PLB1Q6P1J6 1458 aa23.22■■□□□ 1.31
TCF3-212ENST00000588136 IFT140Q96RY7 1462 aa23.22■■□□□ 1.31
TCF3-212ENST00000588136 RAPGEF6Q8TEU7 1601 aa23.22■■□□□ 1.31
TCF3-212ENST00000588136 DNMT1P26358 1616 aaKnown RBP23.21■■□□□ 1.31
TCF3-212ENST00000588136 GRIN2AQ12879 1464 aa23.21■■□□□ 1.31
TCF3-212ENST00000588136 POLR3GLQ9BT43 218 aa23.21■■□□□ 1.31
TCF3-212ENST00000588136 EIF4G3O43432 1585 aaKnown RBP23.2■■□□□ 1.31
TCF3-212ENST00000588136 CNTLNQ9NXG0 1405 aa23.2■■□□□ 1.3
TCF3-212ENST00000588136 SENP3-EIF4A1A0A087X0R7 540 aa23.2■■□□□ 1.3
TCF3-212ENST00000588136 CFDP1Q9UEE9 299 aaPredicted RBP23.2■■□□□ 1.3
TCF3-212ENST00000588136 CCDC7Q96M83 1385 aa23.19■■□□□ 1.3
TCF3-212ENST00000588136 RPRD2Q5VT52 1461 aaKnown RBP23.18■■□□□ 1.3
TCF3-212ENST00000588136 CHMP7Q8WUX9 453 aaPredicted RBP23.18■■□□□ 1.3
TCF3-212ENST00000588136 TEX14Q8IWB6 1497 aa23.18■■□□□ 1.3
TCF3-212ENST00000588136 PRKRIP1Q9H875 184 aaPredicted RBP23.16■■□□□ 1.3
TCF3-212ENST00000588136 KIF14Q15058 1648 aa23.15■■□□□ 1.3
TCF3-212ENST00000588136 NCOA1Q15788 1441 aa23.15■■□□□ 1.3
TCF3-212ENST00000588136 ROCK1Q13464 1354 aa23.15■■□□□ 1.3
TCF3-212ENST00000588136 CDK11AQ9UQ88 783 aaPredicted RBP23.15■■□□□ 1.3
TCF3-212ENST00000588136 KIF7Q2M1P5 1343 aa23.15■■□□□ 1.3
TCF3-212ENST00000588136 CAMSAP2Q08AD1 1489 aa23.14■■□□□ 1.3
TCF3-212ENST00000588136 MRS2Q9HD23 443 aa23.14■■□□□ 1.29
TCF3-212ENST00000588136 RBM19Q9Y4C8 960 aaKnown RBP23.14■■□□□ 1.29
TCF3-212ENST00000588136 PZPP20742 1482 aa23.11■■□□□ 1.29
TCF3-212ENST00000588136 CEP170Q5SW79 1584 aa23.11■■□□□ 1.29
TCF3-212ENST00000588136 TROQ12816 1431 aaPredicted RBP23.09■■□□□ 1.29
TCF3-212ENST00000588136 BCL11AQ9H165 835 aa23.09■■□□□ 1.29
TCF3-212ENST00000588136 PKD2Q13563 968 aa23.09■■□□□ 1.29
TCF3-212ENST00000588136 GPATCH8Q9UKJ3 1502 aaKnown RBP23.08■■□□□ 1.29
TCF3-212ENST00000588136 SPATA31E1Q6ZUB1 1445 aa23.05■■□□□ 1.28
TCF3-212ENST00000588136 JPH4Q96JJ6 628 aa23.05■■□□□ 1.28
TCF3-212ENST00000588136 KDM2AQ9Y2K7 1162 aa22.99■■□□□ 1.27
TCF3-212ENST00000588136 BCORL1Q5H9F3 1711 aa22.97■■□□□ 1.27
TCF3-212ENST00000588136 USP47Q96K76 1375 aa22.97■■□□□ 1.27
TCF3-212ENST00000588136 SYNJ2O15056 1496 aa22.97■■□□□ 1.27
TCF3-212ENST00000588136 KIAA1107Q9UPP5 1409 aa22.97■■□□□ 1.27
TCF3-212ENST00000588136 ITSN2Q9NZM3 1697 aa22.96■■□□□ 1.27
TCF3-212ENST00000588136 ADGBQ8N7X0 1667 aa22.96■■□□□ 1.27
TCF3-212ENST00000588136 HNRNPMP52272 730 aaKnown RBP eCLIP22.95■■□□□ 1.279e-9■■■■■ 30
TCF3-212ENST00000588136 ANKRD50Q9ULJ7 1429 aa22.95■■□□□ 1.26
TCF3-212ENST00000588136 MAGI1Q96QZ7 1491 aaPredicted RBP22.94■■□□□ 1.26
TCF3-212ENST00000588136 NUP155O75694 1391 aa22.94■■□□□ 1.26
TCF3-212ENST00000588136 PLEKHD1A6NEE1 506 aa22.94■■□□□ 1.26
TCF3-212ENST00000588136 ANKRD30AQ9BXX3 1397 aa22.93■■□□□ 1.26
TCF3-212ENST00000588136 B4GALNT3Q6L9W6 998 aa22.93■■□□□ 1.26
TCF3-212ENST00000588136 CROCC2H7BZ55 1655 aa22.92■■□□□ 1.26
TCF3-212ENST00000588136 MBD5Q9P267 1494 aa22.91■■□□□ 1.26
TCF3-212ENST00000588136 CARMIL2Q6F5E8 1435 aa22.91■■□□□ 1.26
TCF3-212ENST00000588136 CDC42BPAQ5VT25 1732 aa22.9■■□□□ 1.26
TCF3-212ENST00000588136 DHX29Q7Z478 1369 aaKnown RBP22.9■■□□□ 1.26
TCF3-212ENST00000588136 ZBED9Q6R2W3 1325 aa22.89■■□□□ 1.25
TCF3-212ENST00000588136 POLR1AO95602 1720 aaPredicted RBP22.89■■□□□ 1.25
TCF3-212ENST00000588136 ATP10BO94823 1461 aa22.88■■□□□ 1.25
TCF3-212ENST00000588136 MSH5O43196 834 aa22.88■■□□□ 1.25
TCF3-212ENST00000588136 ADCY10Q96PN6 1610 aa22.88■■□□□ 1.25
TCF3-212ENST00000588136 ADGRL2O95490 1459 aa22.87■■□□□ 1.25
TCF3-212ENST00000588136 C9orf84Q5VXU9 1444 aa22.87■■□□□ 1.25
TCF3-212ENST00000588136 CARD11Q9BXL7 1154 aa22.86■■□□□ 1.25
TCF3-212ENST00000588136 NUP160Q12769 1436 aa22.85■■□□□ 1.25
TCF3-212ENST00000588136 DCAF11Q8TEB1 546 aa22.85■■□□□ 1.25
TCF3-212ENST00000588136 TSPY4P0CV99 314 aa22.83■■□□□ 1.25
TCF3-212ENST00000588136 TSPY10P0CW01 314 aa22.83■■□□□ 1.25
TCF3-212ENST00000588136 KDM5CP41229 1560 aa22.83■■□□□ 1.24
TCF3-212ENST00000588136 ABCC10Q5T3U5 1492 aa22.83■■□□□ 1.24
TCF3-212ENST00000588136 ST20-MTHFSA0A0A6YYL1 179 aa22.82■■□□□ 1.24
TCF3-212ENST00000588136 PPP4R2Q9NY27 417 aa22.82■■□□□ 1.24
TCF3-212ENST00000588136 KIF15Q9NS87 1388 aa22.8■■□□□ 1.24
TCF3-212ENST00000588136 ABCA8O94911 1581 aa22.8■■□□□ 1.24
TCF3-212ENST00000588136 RGL3Q3MIN7 710 aa22.78■■□□□ 1.24
TCF3-212ENST00000588136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.77■■□□□ 1.24
TCF3-212ENST00000588136 SALL2Q9Y467 1007 aaPredicted RBP22.74■■□□□ 1.23
TCF3-212ENST00000588136 TMC1Q8TDI8 760 aa22.73■■□□□ 1.23
TCF3-212ENST00000588136 RALGAPBQ86X10 1494 aa22.71■■□□□ 1.23
TCF3-212ENST00000588136 PTPRGP23470 1445 aa22.7■■□□□ 1.22
TCF3-212ENST00000588136 NBPF1Q3BBV0 1214 aa22.69■■□□□ 1.22
TCF3-212ENST00000588136 PNISRQ8TF01 805 aaKnown RBP22.69■■□□□ 1.22
TCF3-212ENST00000588136 UHRF1BP1Q6BDS2 1440 aa22.68■■□□□ 1.22
TCF3-212ENST00000588136 ROCK2O75116 1388 aaKnown RBP22.68■■□□□ 1.22
TCF3-212ENST00000588136 SHANK2Q9UPX8 1470 aa22.68■■□□□ 1.22
TCF3-212ENST00000588136 SAMD9LQ8IVG5 1584 aa22.68■■□□□ 1.22
TCF3-212ENST00000588136 CDC42BPBQ9Y5S2 1711 aa22.66■■□□□ 1.22
TCF3-212ENST00000588136 NUDCQ9Y266 331 aa22.66■■□□□ 1.22
TCF3-212ENST00000588136 SMG6Q86US8 1419 aaKnown RBP22.64■■□□□ 1.21
TCF3-212ENST00000588136 ERICH6BQ5W0A0 696 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms