RNA–Protein interactions for RNA: ENST00000587832.5

GCDH-206, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 791 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-206ENST00000587832 PCF11O94913 1555 aaKnown RBP28.24■■■□□ 2.11
GCDH-206ENST00000587832 RIMS1Q86UR5 1692 aaKnown RBP28.23■■■□□ 2.11
GCDH-206ENST00000587832 CLIP1P30622 1438 aa28.23■■■□□ 2.11
GCDH-206ENST00000587832 SCAPERQ9BY12 1400 aa28.23■■■□□ 2.11
GCDH-206ENST00000587832 ATP1B4Q9UN42 357 aaPredicted RBP28.22■■■□□ 2.11
GCDH-206ENST00000587832 CCDC18Q5T9S5 1454 aa28.21■■■□□ 2.11
GCDH-206ENST00000587832 ARID4BQ4LE39 1312 aaPredicted RBP28.21■■■□□ 2.11
GCDH-206ENST00000587832 YEATS2Q9ULM3 1422 aa28.21■■■□□ 2.11
GCDH-206ENST00000587832 CASKIN1Q8WXD9 1431 aa28.2■■■□□ 2.11
GCDH-206ENST00000587832 CDC42BPBQ9Y5S2 1711 aa28.18■■■□□ 2.1
GCDH-206ENST00000587832 EFCAB2Q5VUJ9 269 aa28.17■■■□□ 2.1
GCDH-206ENST00000587832 PREX2Q70Z35 1606 aa28.16■■■□□ 2.1
GCDH-206ENST00000587832 ARHGAP5Q13017 1502 aa28.16■■■□□ 2.1
GCDH-206ENST00000587832 KDM5CP41229 1560 aa28.16■■■□□ 2.1
GCDH-206ENST00000587832 ZNF518AQ6AHZ1 1483 aa28.15■■■□□ 2.1
GCDH-206ENST00000587832 FER1L4A9Z1Z3 1794 aa28.14■■■□□ 2.1
GCDH-206ENST00000587832 FYCO1Q9BQS8 1478 aa28.14■■■□□ 2.09
GCDH-206ENST00000587832 ATP10AO60312 1499 aa28.1■■■□□ 2.09
GCDH-206ENST00000587832 C9orf84Q5VXU9 1444 aa28.09■■■□□ 2.09
GCDH-206ENST00000587832 LMTK3Q96Q04 1460 aa28.09■■■□□ 2.09
GCDH-206ENST00000587832 CDC42BPAQ5VT25 1732 aa28.08■■■□□ 2.09
GCDH-206ENST00000587832 ILDR1Q86SU0 546 aaPredicted RBP28.06■■■□□ 2.08
GCDH-206ENST00000587832 ABCC1P33527 1531 aa28.06■■■□□ 2.08
GCDH-206ENST00000587832 ARHGEF12Q9NZN5 1544 aa28.06■■■□□ 2.08
GCDH-206ENST00000587832 ITSN2Q9NZM3 1697 aa28.05■■■□□ 2.08
GCDH-206ENST00000587832 REREQ9P2R6 1566 aa28.04■■■□□ 2.08
GCDH-206ENST00000587832 DIP2CQ9Y2E4 1556 aa28.03■■■□□ 2.08
GCDH-206ENST00000587832 MLH3Q9UHC1 1453 aa27.99■■■□□ 2.07
GCDH-206ENST00000587832 ABCA6Q8N139 1617 aa27.99■■■□□ 2.07
GCDH-206ENST00000587832 AFAP1Q8N556 730 aa27.95■■■□□ 2.06
GCDH-206ENST00000587832 KIDINS220Q9ULH0 1771 aa27.92■■■□□ 2.06
GCDH-206ENST00000587832 PREX1Q8TCU6 1659 aa27.92■■■□□ 2.06
GCDH-206ENST00000587832 TRAPPC8Q9Y2L5 1435 aa27.91■■■□□ 2.06
GCDH-206ENST00000587832 SAMD9LQ8IVG5 1584 aa27.9■■■□□ 2.06
GCDH-206ENST00000587832 MLECQ14165 292 aa27.9■■■□□ 2.06
GCDH-206ENST00000587832 AGLP35573 1532 aa27.9■■■□□ 2.06
GCDH-206ENST00000587832 GPATCH8Q9UKJ3 1502 aaKnown RBP27.86■■■□□ 2.05
GCDH-206ENST00000587832 SYCP2Q9BX26 1530 aa27.83■■■□□ 2.05
GCDH-206ENST00000587832 C3P01024 1663 aa27.8■■■□□ 2.04
GCDH-206ENST00000587832 SETD1BQ9UPS6 1966 aaKnown RBP27.79■■■□□ 2.04
GCDH-206ENST00000587832 PLEKHH2Q8IVE3 1493 aa27.79■■■□□ 2.04
GCDH-206ENST00000587832 MYT1LQ9UL68 1186 aa27.79■■■□□ 2.04
GCDH-206ENST00000587832 PLPPR3Q6T4P5 718 aa27.78■■■□□ 2.04
GCDH-206ENST00000587832 INO80Q9ULG1 1556 aaPredicted RBP27.77■■■□□ 2.04
GCDH-206ENST00000587832 EHBP1L1Q8N3D4 1523 aa27.77■■■□□ 2.04
GCDH-206ENST00000587832 KIAA1107Q9UPP5 1409 aa27.77■■■□□ 2.04
GCDH-206ENST00000587832 HSPA2P54652 639 aa27.77■■■□□ 2.04
GCDH-206ENST00000587832 MTUS2Q5JR59 1369 aa27.75■■■□□ 2.03
GCDH-206ENST00000587832 TIAM1Q13009 1591 aa27.74■■■□□ 2.03
GCDH-206ENST00000587832 CEP162Q5TB80 1403 aa27.74■■■□□ 2.03
GCDH-206ENST00000587832 CCNB3Q8WWL7 1395 aa27.73■■■□□ 2.03
GCDH-206ENST00000587832 ATP7AQ04656 1500 aa27.73■■■□□ 2.03
GCDH-206ENST00000587832 FBXO41Q8TF61 875 aa27.73■■■□□ 2.03
GCDH-206ENST00000587832 MROH2AA6NES4 1674 aa27.72■■■□□ 2.03
GCDH-206ENST00000587832 PLXNC1O60486 1568 aa27.71■■■□□ 2.03
GCDH-206ENST00000587832 ZNF777Q9ULD5 760 aaPredicted RBP27.7■■■□□ 2.02
GCDH-206ENST00000587832 CNTLNQ9NXG0 1405 aa27.69■■■□□ 2.02
GCDH-206ENST00000587832 CEBPAP49715 358 aaPredicted RBP27.69■■■□□ 2.02
GCDH-206ENST00000587832 UHRF1BP1Q6BDS2 1440 aa27.68■■■□□ 2.02
GCDH-206ENST00000587832 SUPT6HQ7KZ85 1726 aaKnown RBP27.68■■■□□ 2.02
GCDH-206ENST00000587832 CFDP1Q9UEE9 299 aaPredicted RBP27.68■■■□□ 2.02
GCDH-206ENST00000587832 STRCQ7RTU9 1775 aa27.68■■■□□ 2.02
GCDH-206ENST00000587832 ADGBQ8N7X0 1667 aa27.67■■■□□ 2.02
GCDH-206ENST00000587832 SPAG9O60271 1321 aaKnown RBP27.67■■■□□ 2.02
GCDH-206ENST00000587832 HNRNPMP52272 730 aaKnown RBP eCLIP27.64■■■□□ 2.02
GCDH-206ENST00000587832 ESF1Q9H501 851 aaKnown RBP27.61■■■□□ 2.01
GCDH-206ENST00000587832 A2MP01023 1474 aa27.6■■■□□ 2.01
GCDH-206ENST00000587832 MBD5Q9P267 1494 aa27.59■■■□□ 2.01
GCDH-206ENST00000587832 CLTCQ00610 1675 aaKnown RBP27.57■■■□□ 2
GCDH-206ENST00000587832 NPATQ14207 1427 aa27.57■■■□□ 2
GCDH-206ENST00000587832 RTEL1-TNFRSF6BF6WH68 1400 aa27.54■■■□□ 2
GCDH-206ENST00000587832 NCOA2Q15596 1464 aa27.53■■■□□ 2
GCDH-206ENST00000587832 ZNF644Q9H582 1327 aaPredicted RBP27.51■■□□□ 1.99
GCDH-206ENST00000587832 DMRT2Q9Y5R5 561 aa27.51■■□□□ 1.99
GCDH-206ENST00000587832 ZNF142P52746 1687 aaPredicted RBP27.5■■□□□ 1.99
GCDH-206ENST00000587832 CAMSAP2Q08AD1 1489 aa27.48■■□□□ 1.99
GCDH-206ENST00000587832 CCDC141Q6ZP82 1450 aa27.48■■□□□ 1.99
GCDH-206ENST00000587832 VPS8Q8N3P4 1428 aa27.48■■□□□ 1.99
GCDH-206ENST00000587832 ZMYM3Q14202 1370 aa27.48■■□□□ 1.99
GCDH-206ENST00000587832 CERKQ8TCT0 537 aa27.47■■□□□ 1.99
GCDH-206ENST00000587832 MYO3AQ8NEV4 1616 aa27.47■■□□□ 1.99
GCDH-206ENST00000587832 PTPRTO14522 1441 aa27.47■■□□□ 1.99
GCDH-206ENST00000587832 ARHGEF5Q12774 1597 aa27.45■■□□□ 1.99
GCDH-206ENST00000587832 NCOA1Q15788 1441 aa27.44■■□□□ 1.98
GCDH-206ENST00000587832 PPP6R1Q9UPN7 881 aa27.43■■□□□ 1.98
GCDH-206ENST00000587832 MAP3K1Q13233 1512 aa27.42■■□□□ 1.98
GCDH-206ENST00000587832 FAM135AQ9P2D6 1515 aa27.42■■□□□ 1.98
GCDH-206ENST00000587832 LRRC9Q6ZRR7 1453 aa27.42■■□□□ 1.98
GCDH-206ENST00000587832 CAMSAP1Q5T5Y3 1602 aa27.41■■□□□ 1.98
GCDH-206ENST00000587832 DHX29Q7Z478 1369 aaKnown RBP27.4■■□□□ 1.98
GCDH-206ENST00000587832 PTPRKQ15262 1439 aa27.4■■□□□ 1.98
GCDH-206ENST00000587832 CEP170BQ9Y4F5 1589 aaPredicted RBP27.39■■□□□ 1.97
GCDH-206ENST00000587832 RSPH4AQ5TD94 716 aa27.38■■□□□ 1.97
GCDH-206ENST00000587832 GGT6Q6P531 493 aa27.36■■□□□ 1.97
GCDH-206ENST00000587832 PLA2R1Q13018 1463 aa27.34■■□□□ 1.97
GCDH-206ENST00000587832 MAST1Q9Y2H9 1570 aa27.34■■□□□ 1.97
GCDH-206ENST00000587832 KDM5DQ9BY66 1539 aa27.33■■□□□ 1.97
GCDH-206ENST00000587832 LTBP4Q8N2S1 1624 aa27.32■■□□□ 1.96
GCDH-206ENST00000587832 LOC105371045A0A1W2PR82 267 aa27.3■■□□□ 1.96
GCDH-206ENST00000587832 RNF17Q9BXT8 1623 aaKnown RBP27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms