RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 ARID3CA6NKF2 412 aa13.83□□□□□ -0.2
NEDD4L-218ENST00000587547 SAMD1Q6SPF0 538 aaPredicted RBP13.83□□□□□ -0.2
NEDD4L-218ENST00000587547 SPATA31D1Q6ZQQ2 1576 aa13.82□□□□□ -0.2
NEDD4L-218ENST00000587547 PHLDB1Q86UU1 1377 aa13.81□□□□□ -0.2
NEDD4L-218ENST00000587547 ABCA9Q8IUA7 1624 aa13.79□□□□□ -0.2
NEDD4L-218ENST00000587547 ARHGEF40Q8TER5 1519 aa13.79□□□□□ -0.2
NEDD4L-218ENST00000587547 NEO1Q92859 1461 aa13.78□□□□□ -0.2
NEDD4L-218ENST00000587547 ATP10BO94823 1461 aa13.77□□□□□ -0.21
NEDD4L-218ENST00000587547 GOLGA3Q08378 1498 aa13.77□□□□□ -0.21
NEDD4L-218ENST00000587547 CTTNBP2Q8WZ74 1663 aa13.77□□□□□ -0.21
NEDD4L-218ENST00000587547 PRXQ9BXM0 1461 aa13.77□□□□□ -0.21
NEDD4L-218ENST00000587547 FKBP8Q14318 412 aa13.76□□□□□ -0.21
NEDD4L-218ENST00000587547 SIGLEC1Q9BZZ2 1709 aa13.73□□□□□ -0.21
NEDD4L-218ENST00000587547 FANCAO15360 1455 aa13.7□□□□□ -0.22
NEDD4L-218ENST00000587547 DENND4BO75064 1496 aaPredicted RBP13.69□□□□□ -0.22
NEDD4L-218ENST00000587547 MLECQ14165 292 aa13.69□□□□□ -0.22
NEDD4L-218ENST00000587547 POGZQ7Z3K3 1410 aa13.69□□□□□ -0.22
NEDD4L-218ENST00000587547 YEATS2Q9ULM3 1422 aa13.69□□□□□ -0.22
NEDD4L-218ENST00000587547 RICTORQ6R327 1708 aa13.69□□□□□ -0.22
NEDD4L-218ENST00000587547 FHOD3Q2V2M9 1422 aa13.68□□□□□ -0.22
NEDD4L-218ENST00000587547 AKNAQ7Z591 1439 aa13.68□□□□□ -0.22
NEDD4L-218ENST00000587547 TTC37Q6PGP7 1564 aa13.67□□□□□ -0.22
NEDD4L-218ENST00000587547 UBTFP17480 764 aaKnown RBP13.67□□□□□ -0.22
NEDD4L-218ENST00000587547 P3H3Q8IVL6 736 aa13.67□□□□□ -0.22
NEDD4L-218ENST00000587547 STRCQ7RTU9 1775 aa13.66□□□□□ -0.22
NEDD4L-218ENST00000587547 FER1L4A9Z1Z3 1794 aa13.66□□□□□ -0.22
NEDD4L-218ENST00000587547 LOC105371045A0A1W2PR82 267 aa13.65□□□□□ -0.22
NEDD4L-218ENST00000587547 ZMYM4Q5VZL5 1548 aa13.64□□□□□ -0.23
NEDD4L-218ENST00000587547 ZFYVE16Q7Z3T8 1539 aa13.64□□□□□ -0.23
NEDD4L-218ENST00000587547 PREX1Q8TCU6 1659 aa13.63□□□□□ -0.23
NEDD4L-218ENST00000587547 CEBPAP49715 358 aaPredicted RBP13.63□□□□□ -0.23
NEDD4L-218ENST00000587547 EFCAB5A4FU69 1503 aa13.62□□□□□ -0.23
NEDD4L-218ENST00000587547 ARHGEF12Q9NZN5 1544 aa13.61□□□□□ -0.23
NEDD4L-218ENST00000587547 RAPGEF6Q8TEU7 1601 aa13.6□□□□□ -0.23
NEDD4L-218ENST00000587547 RANGAP1P46060 587 aaPredicted RBP13.59□□□□□ -0.23
NEDD4L-218ENST00000587547 HECW1Q76N89 1606 aa13.59□□□□□ -0.23
NEDD4L-218ENST00000587547 LTBP4Q8N2S1 1624 aa13.59□□□□□ -0.23
NEDD4L-218ENST00000587547 NUP153P49790 1475 aaKnown RBP13.59□□□□□ -0.23
NEDD4L-218ENST00000587547 MAGI2Q86UL8 1455 aa13.58□□□□□ -0.24
NEDD4L-218ENST00000587547 PTPRTO14522 1441 aa13.57□□□□□ -0.24
NEDD4L-218ENST00000587547 UHRF1BP1Q6BDS2 1440 aa13.56□□□□□ -0.24
NEDD4L-218ENST00000587547 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.56□□□□□ -0.24
NEDD4L-218ENST00000587547 APLP2Q06481 763 aa13.56□□□□□ -0.24
NEDD4L-218ENST00000587547 ZNF219Q9P2Y4 722 aaPredicted RBP13.56□□□□□ -0.24
NEDD4L-218ENST00000587547 CFAP74Q9C0B2 1584 aa13.56□□□□□ -0.24
NEDD4L-218ENST00000587547 SAMD9Q5K651 1589 aa13.54□□□□□ -0.24
NEDD4L-218ENST00000587547 IQSEC2Q5JU85 1478 aa13.54□□□□□ -0.24
NEDD4L-218ENST00000587547 C9orf84Q5VXU9 1444 aa13.53□□□□□ -0.24
NEDD4L-218ENST00000587547 ATP10AO60312 1499 aa13.53□□□□□ -0.24
NEDD4L-218ENST00000587547 SCAPERQ9BY12 1400 aa13.52□□□□□ -0.25
NEDD4L-218ENST00000587547 PLEKHD1A6NEE1 506 aa13.51□□□□□ -0.25
NEDD4L-218ENST00000587547 CEP162Q5TB80 1403 aa13.49□□□□□ -0.25
NEDD4L-218ENST00000587547 CLIP1P30622 1438 aa13.47□□□□□ -0.25
NEDD4L-218ENST00000587547 NCOA1Q15788 1441 aa13.47□□□□□ -0.25
NEDD4L-218ENST00000587547 RTN4Q9NQC3 1192 aaKnown RBP13.47□□□□□ -0.25
NEDD4L-218ENST00000587547 SETD1BQ9UPS6 1966 aaKnown RBP13.46□□□□□ -0.25
NEDD4L-218ENST00000587547 UBAP1LF5GYI3 381 aa13.46□□□□□ -0.25
NEDD4L-218ENST00000587547 ARHGAP35Q9NRY4 1499 aa13.45□□□□□ -0.26
NEDD4L-218ENST00000587547 AMER1Q5JTC6 1135 aaPredicted RBP13.45□□□□□ -0.26
NEDD4L-218ENST00000587547 PLCH2O75038 1416 aa13.45□□□□□ -0.26
NEDD4L-218ENST00000587547 ZNF335Q9H4Z2 1342 aaPredicted RBP13.44□□□□□ -0.26
NEDD4L-218ENST00000587547 C3P01024 1663 aa13.44□□□□□ -0.26
NEDD4L-218ENST00000587547 MED1Q15648 1581 aaPredicted RBP13.44□□□□□ -0.26
NEDD4L-218ENST00000587547 TRAPPC8Q9Y2L5 1435 aa13.41□□□□□ -0.26
NEDD4L-218ENST00000587547 CDK13Q14004 1512 aaKnown RBP13.41□□□□□ -0.26
NEDD4L-218ENST00000587547 DIP2CQ9Y2E4 1556 aa13.41□□□□□ -0.26
NEDD4L-218ENST00000587547 CAMSAP1Q5T5Y3 1602 aa13.4□□□□□ -0.26
NEDD4L-218ENST00000587547 AFAP1Q8N556 730 aa13.4□□□□□ -0.26
NEDD4L-218ENST00000587547 HSPA1LP34931 641 aa13.39□□□□□ -0.27
NEDD4L-218ENST00000587547 ZNF518AQ6AHZ1 1483 aa13.39□□□□□ -0.27
NEDD4L-218ENST00000587547 KDM5CP41229 1560 aa13.39□□□□□ -0.27
NEDD4L-218ENST00000587547 NCKAP5LQ9HCH0 1330 aa13.39□□□□□ -0.27
NEDD4L-218ENST00000587547 EFCAB2Q5VUJ9 269 aa13.37□□□□□ -0.27
NEDD4L-218ENST00000587547 ABCA6Q8N139 1617 aa13.37□□□□□ -0.27
NEDD4L-218ENST00000587547 REREQ9P2R6 1566 aa13.37□□□□□ -0.27
NEDD4L-218ENST00000587547 RNF39Q9H2S5 420 aa13.35□□□□□ -0.27
NEDD4L-218ENST00000587547 MYT1LQ9UL68 1186 aa13.35□□□□□ -0.27
NEDD4L-218ENST00000587547 ESF1Q9H501 851 aaKnown RBP13.34□□□□□ -0.27
NEDD4L-218ENST00000587547 SPINK5Q9NQ38 1064 aaPredicted RBP13.34□□□□□ -0.27
NEDD4L-218ENST00000587547 AGLP35573 1532 aa13.34□□□□□ -0.27
NEDD4L-218ENST00000587547 LRRIQ1Q96JM4 1722 aa13.33□□□□□ -0.27
NEDD4L-218ENST00000587547 MYO5CQ9NQX4 1742 aa13.33□□□□□ -0.27
NEDD4L-218ENST00000587547 FMN1Q68DA7 1419 aa13.33□□□□□ -0.28
NEDD4L-218ENST00000587547 PIP4K2BP78356 416 aa13.32□□□□□ -0.28
NEDD4L-218ENST00000587547 KIF14Q15058 1648 aa13.31□□□□□ -0.28
NEDD4L-218ENST00000587547 NPATQ14207 1427 aa13.31□□□□□ -0.28
NEDD4L-218ENST00000587547 CNTLNQ9NXG0 1405 aa13.31□□□□□ -0.28
NEDD4L-218ENST00000587547 MLH3Q9UHC1 1453 aa13.31□□□□□ -0.28
NEDD4L-218ENST00000587547 ARHGAP5Q13017 1502 aa13.31□□□□□ -0.28
NEDD4L-218ENST00000587547 PLA2R1Q13018 1463 aa13.29□□□□□ -0.28
NEDD4L-218ENST00000587547 TCOF1Q13428 1488 aaKnown RBP13.29□□□□□ -0.28
NEDD4L-218ENST00000587547 ATP1B4Q9UN42 357 aaPredicted RBP13.29□□□□□ -0.28
NEDD4L-218ENST00000587547 VPS8Q8N3P4 1428 aa13.29□□□□□ -0.28
NEDD4L-218ENST00000587547 MKRN4PQ13434 485 aaPredicted RBP13.28□□□□□ -0.28
NEDD4L-218ENST00000587547 PKD2Q13563 968 aa13.28□□□□□ -0.28
NEDD4L-218ENST00000587547 ZMYM3Q14202 1370 aa13.27□□□□□ -0.29
NEDD4L-218ENST00000587547 FYCO1Q9BQS8 1478 aa13.27□□□□□ -0.29
NEDD4L-218ENST00000587547 MYO3AQ8NEV4 1616 aa13.26□□□□□ -0.29
NEDD4L-218ENST00000587547 CASKIN1Q8WXD9 1431 aa13.26□□□□□ -0.29
NEDD4L-218ENST00000587547 ZNF142P52746 1687 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms