RNA–Protein interactions for RNA: ENST00000586725.1

GALNT1-202, Transcript of polypeptide N-acetylgalactosaminyltransferase 1, humanhuman

TSL 5

Gene GALNT1, Length 272 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GALNT1-202ENST00000586725 HECW1Q76N89 1606 aa23.69■■□□□ 1.38
GALNT1-202ENST00000586725 LTBP4Q8N2S1 1624 aa23.68■■□□□ 1.38
GALNT1-202ENST00000586725 NUP153P49790 1475 aaKnown RBP23.68■■□□□ 1.38
GALNT1-202ENST00000586725 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.65■■□□□ 1.38
GALNT1-202ENST00000586725 MLECQ14165 292 aa23.65■■□□□ 1.38
GALNT1-202ENST00000586725 UHRF1BP1Q6BDS2 1440 aa23.65■■□□□ 1.38
GALNT1-202ENST00000586725 P3H3Q8IVL6 736 aa23.64■■□□□ 1.37
GALNT1-202ENST00000586725 ATP10AO60312 1499 aa23.63■■□□□ 1.37
GALNT1-202ENST00000586725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.63■■□□□ 1.37
GALNT1-202ENST00000586725 HNRNPUL2Q1KMD3 747 aaKnown RBP23.63■■□□□ 1.37
GALNT1-202ENST00000586725 PLEKHD1A6NEE1 506 aa23.62■■□□□ 1.37
GALNT1-202ENST00000586725 C9orf84Q5VXU9 1444 aa23.6■■□□□ 1.37
GALNT1-202ENST00000586725 CEBPAP49715 358 aaPredicted RBP23.58■■□□□ 1.37
GALNT1-202ENST00000586725 SCAPERQ9BY12 1400 aa23.55■■□□□ 1.36
GALNT1-202ENST00000586725 PLCH2O75038 1416 aa23.51■■□□□ 1.35
GALNT1-202ENST00000586725 C3P01024 1663 aa23.48■■□□□ 1.35
GALNT1-202ENST00000586725 REREQ9P2R6 1566 aa23.48■■□□□ 1.35
GALNT1-202ENST00000586725 NCOA1Q15788 1441 aa23.47■■□□□ 1.35
GALNT1-202ENST00000586725 TRAPPC8Q9Y2L5 1435 aa23.43■■□□□ 1.34
GALNT1-202ENST00000586725 KDM5CP41229 1560 aa23.43■■□□□ 1.34
GALNT1-202ENST00000586725 ZNF518AQ6AHZ1 1483 aa23.42■■□□□ 1.34
GALNT1-202ENST00000586725 AGLP35573 1532 aa23.39■■□□□ 1.34
GALNT1-202ENST00000586725 MYO5CQ9NQX4 1742 aa23.38■■□□□ 1.33
GALNT1-202ENST00000586725 DIP2CQ9Y2E4 1556 aa23.37■■□□□ 1.33
GALNT1-202ENST00000586725 EFCAB2Q5VUJ9 269 aa23.37■■□□□ 1.33
GALNT1-202ENST00000586725 UBAP1LF5GYI3 381 aa23.34■■□□□ 1.33
GALNT1-202ENST00000586725 CAMSAP1Q5T5Y3 1602 aa23.33■■□□□ 1.32
GALNT1-202ENST00000586725 MED1Q15648 1581 aaPredicted RBP23.32■■□□□ 1.32
GALNT1-202ENST00000586725 CNTLNQ9NXG0 1405 aa23.32■■□□□ 1.32
GALNT1-202ENST00000586725 MLH3Q9UHC1 1453 aa23.31■■□□□ 1.32
GALNT1-202ENST00000586725 NPATQ14207 1427 aa23.3■■□□□ 1.32
GALNT1-202ENST00000586725 CDK13Q14004 1512 aaKnown RBP23.28■■□□□ 1.32
GALNT1-202ENST00000586725 ABCA6Q8N139 1617 aa23.28■■□□□ 1.32
GALNT1-202ENST00000586725 ZNF335Q9H4Z2 1342 aaPredicted RBP23.28■■□□□ 1.32
GALNT1-202ENST00000586725 AFAP1Q8N556 730 aa23.27■■□□□ 1.32
GALNT1-202ENST00000586725 MROH2AA6NES4 1674 aa23.27■■□□□ 1.32
GALNT1-202ENST00000586725 PLA2R1Q13018 1463 aa23.26■■□□□ 1.31
GALNT1-202ENST00000586725 ESF1Q9H501 851 aaKnown RBP23.26■■□□□ 1.31
GALNT1-202ENST00000586725 CSRNP3Q8WYN3 585 aa23.25■■□□□ 1.31
GALNT1-202ENST00000586725 PKD2Q13563 968 aa23.23■■□□□ 1.31
GALNT1-202ENST00000586725 ZNF142P52746 1687 aaPredicted RBP23.22■■□□□ 1.31
GALNT1-202ENST00000586725 TCOF1Q13428 1488 aaKnown RBP23.21■■□□□ 1.31
GALNT1-202ENST00000586725 ARHGAP5Q13017 1502 aa23.18■■□□□ 1.3
GALNT1-202ENST00000586725 NCKAP5LQ9HCH0 1330 aa23.18■■□□□ 1.3
GALNT1-202ENST00000586725 KIF14Q15058 1648 aa23.18■■□□□ 1.3
GALNT1-202ENST00000586725 HSPA1LP34931 641 aa23.17■■□□□ 1.3
GALNT1-202ENST00000586725 CDK11AQ9UQ88 783 aaPredicted RBP23.16■■□□□ 1.3
GALNT1-202ENST00000586725 MYT1LQ9UL68 1186 aa23.15■■□□□ 1.3
GALNT1-202ENST00000586725 CDC42BPBQ9Y5S2 1711 aa23.15■■□□□ 1.3
GALNT1-202ENST00000586725 KIDINS220Q9ULH0 1771 aa23.14■■□□□ 1.3
GALNT1-202ENST00000586725 SUPT6HQ7KZ85 1726 aaKnown RBP23.14■■□□□ 1.3
GALNT1-202ENST00000586725 ZMYM3Q14202 1370 aa23.14■■□□□ 1.29
GALNT1-202ENST00000586725 MYO3AQ8NEV4 1616 aa23.12■■□□□ 1.29
GALNT1-202ENST00000586725 CEP170BQ9Y4F5 1589 aaPredicted RBP23.11■■□□□ 1.29
GALNT1-202ENST00000586725 TROQ12816 1431 aaPredicted RBP23.11■■□□□ 1.29
GALNT1-202ENST00000586725 TOM1O60784 492 aa23.11■■□□□ 1.29
GALNT1-202ENST00000586725 RANGAP1P46060 587 aaPredicted RBP23.11■■□□□ 1.29
GALNT1-202ENST00000586725 ABCC1P33527 1531 aa23.11■■□□□ 1.29
GALNT1-202ENST00000586725 ITSN2Q9NZM3 1697 aa23.09■■□□□ 1.29
GALNT1-202ENST00000586725 CPS1P31327 1500 aa23.09■■□□□ 1.29
GALNT1-202ENST00000586725 PPP6R1Q9UPN7 881 aa23.08■■□□□ 1.29
GALNT1-202ENST00000586725 EEA1Q15075 1411 aa23.07■■□□□ 1.28
GALNT1-202ENST00000586725 FMN1Q68DA7 1419 aa23.07■■□□□ 1.28
GALNT1-202ENST00000586725 PREX2Q70Z35 1606 aa23.05■■□□□ 1.28
GALNT1-202ENST00000586725 CLIP1P30622 1438 aa23.05■■□□□ 1.28
GALNT1-202ENST00000586725 PHF23Q9BUL5 403 aaPredicted RBP23.04■■□□□ 1.28
GALNT1-202ENST00000586725 PTPRKQ15262 1439 aa23.04■■□□□ 1.28
GALNT1-202ENST00000586725 CLTCQ00610 1675 aaKnown RBP23.01■■□□□ 1.27
GALNT1-202ENST00000586725 PIP4K2BP78356 416 aa23.01■■□□□ 1.27
GALNT1-202ENST00000586725 SCAF1Q9H7N4 1312 aaKnown RBP23■■□□□ 1.27
GALNT1-202ENST00000586725 SHANK2Q9UPX8 1470 aa22.98■■□□□ 1.27
GALNT1-202ENST00000586725 POLR1AO95602 1720 aaPredicted RBP22.98■■□□□ 1.27
GALNT1-202ENST00000586725 SAMD9LQ8IVG5 1584 aa22.97■■□□□ 1.27
GALNT1-202ENST00000586725 DNMT1P26358 1616 aaKnown RBP22.97■■□□□ 1.27
GALNT1-202ENST00000586725 ALKQ9UM73 1620 aa22.97■■□□□ 1.27
GALNT1-202ENST00000586725 A2ML1A8K2U0 1454 aa22.97■■□□□ 1.27
GALNT1-202ENST00000586725 PLXNC1O60486 1568 aa22.96■■□□□ 1.27
GALNT1-202ENST00000586725 LRRIQ1Q96JM4 1722 aa22.95■■□□□ 1.26
GALNT1-202ENST00000586725 NEURL4Q96JN8 1562 aa22.94■■□□□ 1.26
GALNT1-202ENST00000586725 ATP1B4Q9UN42 357 aaPredicted RBP22.92■■□□□ 1.26
GALNT1-202ENST00000586725 CDC42BPAQ5VT25 1732 aa22.91■■□□□ 1.26
GALNT1-202ENST00000586725 VWDEQ8N2E2 1590 aa22.89■■□□□ 1.25
GALNT1-202ENST00000586725 ARHGAP35Q9NRY4 1499 aa22.88■■□□□ 1.25
GALNT1-202ENST00000586725 RGS17Q9UGC6 210 aaPredicted RBP22.86■■□□□ 1.25
GALNT1-202ENST00000586725 ATP7AQ04656 1500 aa22.86■■□□□ 1.25
GALNT1-202ENST00000586725 A2MP01023 1474 aa22.85■■□□□ 1.25
GALNT1-202ENST00000586725 SPAG9O60271 1321 aaKnown RBP22.85■■□□□ 1.25
GALNT1-202ENST00000586725 INO80Q9ULG1 1556 aaPredicted RBP22.84■■□□□ 1.25
GALNT1-202ENST00000586725 MED14O60244 1454 aa22.83■■□□□ 1.25
GALNT1-202ENST00000586725 SYCP2Q9BX26 1530 aa22.82■■□□□ 1.24
GALNT1-202ENST00000586725 DEPDC5O75140 1603 aa22.81■■□□□ 1.24
GALNT1-202ENST00000586725 KIAA1107Q9UPP5 1409 aa22.81■■□□□ 1.24
GALNT1-202ENST00000586725 CCDC18Q5T9S5 1454 aa22.79■■□□□ 1.24
GALNT1-202ENST00000586725 GGT6Q6P531 493 aa22.79■■□□□ 1.24
GALNT1-202ENST00000586725 ADGBQ8N7X0 1667 aa22.78■■□□□ 1.24
GALNT1-202ENST00000586725 RNF17Q9BXT8 1623 aaKnown RBP22.78■■□□□ 1.24
GALNT1-202ENST00000586725 ANKLE2Q86XL3 938 aa22.77■■□□□ 1.24
GALNT1-202ENST00000586725 SYNMO15061 1565 aa22.76■■□□□ 1.23
GALNT1-202ENST00000586725 PLEKHH2Q8IVE3 1493 aa22.75■■□□□ 1.23
GALNT1-202ENST00000586725 FAM135AQ9P2D6 1515 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms