RNA–Protein interactions for RNA: ENST00000586080.1

R3HDM4-202, Transcript of R3H domain containing 4, humanhuman

TSL 4

Gene R3HDM4, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-202ENST00000586080 KDM4FA0A1W2PPD8 638 aa34.37■■■■□ 3.09
R3HDM4-202ENST00000586080 EHBP1L1Q8N3D4 1523 aa34.35■■■■□ 3.09
R3HDM4-202ENST00000586080 PREX2Q70Z35 1606 aa34.34■■■■□ 3.09
R3HDM4-202ENST00000586080 POGZQ7Z3K3 1410 aa34.33■■■■□ 3.09
R3HDM4-202ENST00000586080 RICTORQ6R327 1708 aa34.33■■■■□ 3.09
R3HDM4-202ENST00000586080 CCNB3Q8WWL7 1395 aa34.29■■■■□ 3.08
R3HDM4-202ENST00000586080 CDC42BPBQ9Y5S2 1711 aa34.29■■■■□ 3.08
R3HDM4-202ENST00000586080 TIAM1Q13009 1591 aa34.28■■■■□ 3.08
R3HDM4-202ENST00000586080 ZNF777Q9ULD5 760 aaPredicted RBP34.27■■■■□ 3.08
R3HDM4-202ENST00000586080 GPATCH8Q9UKJ3 1502 aaKnown RBP34.26■■■■□ 3.08
R3HDM4-202ENST00000586080 ZMYM4Q5VZL5 1548 aa34.25■■■■□ 3.07
R3HDM4-202ENST00000586080 CDC42BPAQ5VT25 1732 aa34.25■■■■□ 3.07
R3HDM4-202ENST00000586080 ARHGEF40Q8TER5 1519 aa34.24■■■■□ 3.07
R3HDM4-202ENST00000586080 ZNF518AQ6AHZ1 1483 aa34.21■■■■□ 3.07
R3HDM4-202ENST00000586080 ZFYVE16Q7Z3T8 1539 aa34.21■■■■□ 3.07
R3HDM4-202ENST00000586080 CFDP1Q9UEE9 299 aaPredicted RBP34.21■■■■□ 3.07
R3HDM4-202ENST00000586080 YEATS2Q9ULM3 1422 aa34.2■■■■□ 3.06
R3HDM4-202ENST00000586080 ABCC1P33527 1531 aa34.2■■■■□ 3.06
R3HDM4-202ENST00000586080 AFAP1Q8N556 730 aa34.19■■■■□ 3.06
R3HDM4-202ENST00000586080 ARID4BQ4LE39 1312 aaPredicted RBP34.19■■■■□ 3.06
R3HDM4-202ENST00000586080 MYT1LQ9UL68 1186 aa34.18■■■■□ 3.06
R3HDM4-202ENST00000586080 MAGI2Q86UL8 1455 aa34.18■■■■□ 3.06
R3HDM4-202ENST00000586080 ARHGEF12Q9NZN5 1544 aa34.14■■■■□ 3.06
R3HDM4-202ENST00000586080 NCOA2Q15596 1464 aa34.14■■■■□ 3.06
R3HDM4-202ENST00000586080 LRRC9Q6ZRR7 1453 aa34.14■■■■□ 3.06
R3HDM4-202ENST00000586080 TRAPPC8Q9Y2L5 1435 aa34.13■■■■□ 3.05
R3HDM4-202ENST00000586080 APLP2Q06481 763 aa34.13■■■■□ 3.05
R3HDM4-202ENST00000586080 SAMD9LQ8IVG5 1584 aa34.12■■■■□ 3.05
R3HDM4-202ENST00000586080 SUPT6HQ7KZ85 1726 aaKnown RBP34.12■■■■□ 3.05
R3HDM4-202ENST00000586080 MAP3K1Q13233 1512 aa34.1■■■■□ 3.05
R3HDM4-202ENST00000586080 KDM5CP41229 1560 aa34.1■■■■□ 3.05
R3HDM4-202ENST00000586080 ITSN2Q9NZM3 1697 aa34.09■■■■□ 3.05
R3HDM4-202ENST00000586080 KANK4Q5T7N3 995 aaPredicted RBP34.09■■■■□ 3.05
R3HDM4-202ENST00000586080 SYCP2Q9BX26 1530 aa34.09■■■■□ 3.05
R3HDM4-202ENST00000586080 HNRNPMP52272 730 aaKnown RBP eCLIP34.06■■■■□ 3.04
R3HDM4-202ENST00000586080 PLEKHH2Q8IVE3 1493 aa34.06■■■■□ 3.04
R3HDM4-202ENST00000586080 HECW2Q9P2P5 1572 aa34.05■■■■□ 3.04
R3HDM4-202ENST00000586080 ZNF644Q9H582 1327 aaPredicted RBP34.03■■■■□ 3.04
R3HDM4-202ENST00000586080 ATP10AO60312 1499 aa34.02■■■■□ 3.04
R3HDM4-202ENST00000586080 KIAA1107Q9UPP5 1409 aa34.02■■■■□ 3.04
R3HDM4-202ENST00000586080 C9orf84Q5VXU9 1444 aa34.01■■■■□ 3.03
R3HDM4-202ENST00000586080 MLH3Q9UHC1 1453 aa34■■■■□ 3.03
R3HDM4-202ENST00000586080 MLECQ14165 292 aa33.95■■■■□ 3.03
R3HDM4-202ENST00000586080 SPAG9O60271 1321 aaKnown RBP33.95■■■■□ 3.03
R3HDM4-202ENST00000586080 BCORL1Q5H9F3 1711 aa33.95■■■■□ 3.03
R3HDM4-202ENST00000586080 DIP2CQ9Y2E4 1556 aa33.94■■■■□ 3.02
R3HDM4-202ENST00000586080 SIGLEC1Q9BZZ2 1709 aa33.92■■■■□ 3.02
R3HDM4-202ENST00000586080 ADAMTSL3P82987 1691 aa33.91■■■■□ 3.02
R3HDM4-202ENST00000586080 ABCA6Q8N139 1617 aa33.91■■■■□ 3.02
R3HDM4-202ENST00000586080 CAMSAP2Q08AD1 1489 aa33.91■■■■□ 3.02
R3HDM4-202ENST00000586080 MADDQ8WXG6 1647 aa33.87■■■■□ 3.01
R3HDM4-202ENST00000586080 KIDINS220Q9ULH0 1771 aa33.86■■■■□ 3.01
R3HDM4-202ENST00000586080 MBD5Q9P267 1494 aa33.86■■■■□ 3.01
R3HDM4-202ENST00000586080 MYOM3Q5VTT5 1437 aa33.84■■■■□ 3.01
R3HDM4-202ENST00000586080 ATP7AQ04656 1500 aa33.84■■■■□ 3.01
R3HDM4-202ENST00000586080 PTPRMP28827 1452 aa33.82■■■■□ 3.01
R3HDM4-202ENST00000586080 REREQ9P2R6 1566 aa33.81■■■■□ 3
R3HDM4-202ENST00000586080 CCDC141Q6ZP82 1450 aa33.8■■■■□ 3
R3HDM4-202ENST00000586080 INO80Q9ULG1 1556 aaPredicted RBP33.79■■■■□ 3
R3HDM4-202ENST00000586080 MIA2Q96PC5 1412 aa33.77■■■■□ 3
R3HDM4-202ENST00000586080 PLPPR3Q6T4P5 718 aa33.76■■■□□ 2.99
R3HDM4-202ENST00000586080 RIMS1Q86UR5 1692 aaKnown RBP33.76■■■□□ 2.99
R3HDM4-202ENST00000586080 RSPH4AQ5TD94 716 aa33.74■■■□□ 2.99
R3HDM4-202ENST00000586080 AGLP35573 1532 aa33.72■■■□□ 2.99
R3HDM4-202ENST00000586080 RTEL1-TNFRSF6BF6WH68 1400 aa33.7■■■□□ 2.98
R3HDM4-202ENST00000586080 A2MP01023 1474 aa33.69■■■□□ 2.98
R3HDM4-202ENST00000586080 ARHGEF5Q12774 1597 aa33.69■■■□□ 2.98
R3HDM4-202ENST00000586080 TSPY4P0CV99 314 aa33.68■■■□□ 2.98
R3HDM4-202ENST00000586080 TSPY10P0CW01 314 aa33.68■■■□□ 2.98
R3HDM4-202ENST00000586080 FER1L4A9Z1Z3 1794 aa33.67■■■□□ 2.98
R3HDM4-202ENST00000586080 FGD6Q6ZV73 1430 aa33.63■■■□□ 2.97
R3HDM4-202ENST00000586080 ESF1Q9H501 851 aaKnown RBP33.63■■■□□ 2.97
R3HDM4-202ENST00000586080 PLXNC1O60486 1568 aa33.61■■■□□ 2.97
R3HDM4-202ENST00000586080 PTPN23Q9H3S7 1636 aa33.61■■■□□ 2.97
R3HDM4-202ENST00000586080 ADGBQ8N7X0 1667 aa33.58■■■□□ 2.97
R3HDM4-202ENST00000586080 DHX29Q7Z478 1369 aaKnown RBP33.56■■■□□ 2.96
R3HDM4-202ENST00000586080 GGT6Q6P531 493 aa33.54■■■□□ 2.96
R3HDM4-202ENST00000586080 PPARGC1BQ86YN6 1023 aaKnown RBP33.54■■■□□ 2.96
R3HDM4-202ENST00000586080 TCOF1Q13428 1488 aaKnown RBP33.53■■■□□ 2.96
R3HDM4-202ENST00000586080 CEBPAP49715 358 aaPredicted RBP33.53■■■□□ 2.96
R3HDM4-202ENST00000586080 MAST1Q9Y2H9 1570 aa33.5■■■□□ 2.95
R3HDM4-202ENST00000586080 FAM50AQ14320 339 aaKnown RBP33.49■■■□□ 2.95
R3HDM4-202ENST00000586080 ABCC5O15440 1437 aa33.48■■■□□ 2.95
R3HDM4-202ENST00000586080 CNTLNQ9NXG0 1405 aa33.48■■■□□ 2.95
R3HDM4-202ENST00000586080 KIF3BO15066 747 aa33.47■■■□□ 2.95
R3HDM4-202ENST00000586080 DAPK1P53355 1430 aa33.46■■■□□ 2.95
R3HDM4-202ENST00000586080 SHANK2Q9UPX8 1470 aa33.44■■■□□ 2.94
R3HDM4-202ENST00000586080 DNMT1P26358 1616 aaKnown RBP33.41■■■□□ 2.94
R3HDM4-202ENST00000586080 CROCC2H7BZ55 1655 aa33.39■■■□□ 2.94
R3HDM4-202ENST00000586080 LMTK3Q96Q04 1460 aa33.39■■■□□ 2.94
R3HDM4-202ENST00000586080 CHIC2Q9UKJ5 165 aa33.38■■■□□ 2.93
R3HDM4-202ENST00000586080 KIF15Q9NS87 1388 aa33.36■■■□□ 2.93
R3HDM4-202ENST00000586080 RRP7BPQ9NSQ0 103 aa33.36■■■□□ 2.93
R3HDM4-202ENST00000586080 PPP6R1Q9UPN7 881 aa33.36■■■□□ 2.93
R3HDM4-202ENST00000586080 C3P01024 1663 aa33.36■■■□□ 2.93
R3HDM4-202ENST00000586080 ZMYM3Q14202 1370 aa33.35■■■□□ 2.93
R3HDM4-202ENST00000586080 CLTCQ00610 1675 aaKnown RBP33.33■■■□□ 2.93
R3HDM4-202ENST00000586080 DUOX2Q9NRD8 1548 aa33.32■■■□□ 2.92
R3HDM4-202ENST00000586080 MROH2AA6NES4 1674 aa33.3■■■□□ 2.92
R3HDM4-202ENST00000586080 HSPA2P54652 639 aa33.3■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms