RNA–Protein interactions for RNA: ENST00000586039.1

PKN1-205, Transcript of protein kinase N1, humanhuman

TSL 2

Gene PKN1, Length 686 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-205ENST00000586039 NUP153P49790 1475 aaKnown RBP26.64■■□□□ 1.86
PKN1-205ENST00000586039 STRCQ7RTU9 1775 aa26.59■■□□□ 1.85
PKN1-205ENST00000586039 HECW1Q76N89 1606 aa26.59■■□□□ 1.85
PKN1-205ENST00000586039 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.58■■□□□ 1.85
PKN1-205ENST00000586039 ARHGEF12Q9NZN5 1544 aa26.58■■□□□ 1.85
PKN1-205ENST00000586039 CEBPAP49715 358 aaPredicted RBP26.56■■□□□ 1.84
PKN1-205ENST00000586039 UHRF1BP1Q6BDS2 1440 aa26.54■■□□□ 1.84
PKN1-205ENST00000586039 SETD1BQ9UPS6 1966 aaKnown RBP26.53■■□□□ 1.84
PKN1-205ENST00000586039 ATP10AO60312 1499 aa26.53■■□□□ 1.84
PKN1-205ENST00000586039 C9orf84Q5VXU9 1444 aa26.51■■□□□ 1.83
PKN1-205ENST00000586039 SCAPERQ9BY12 1400 aa26.51■■□□□ 1.83
PKN1-205ENST00000586039 PTPRTO14522 1441 aa26.49■■□□□ 1.83
PKN1-205ENST00000586039 RANGAP1P46060 587 aaPredicted RBP26.44■■□□□ 1.82
PKN1-205ENST00000586039 IQSEC2Q5JU85 1478 aa26.43■■□□□ 1.82
PKN1-205ENST00000586039 PLCH2O75038 1416 aa26.43■■□□□ 1.82
PKN1-205ENST00000586039 LTBP4Q8N2S1 1624 aa26.4■■□□□ 1.82
PKN1-205ENST00000586039 EFCAB2Q5VUJ9 269 aa26.36■■□□□ 1.81
PKN1-205ENST00000586039 CSRNP3Q8WYN3 585 aa26.36■■□□□ 1.81
PKN1-205ENST00000586039 ESF1Q9H501 851 aaKnown RBP26.32■■□□□ 1.8
PKN1-205ENST00000586039 MYT1LQ9UL68 1186 aa26.32■■□□□ 1.8
PKN1-205ENST00000586039 ZNF518AQ6AHZ1 1483 aa26.31■■□□□ 1.8
PKN1-205ENST00000586039 C3P01024 1663 aa26.31■■□□□ 1.8
PKN1-205ENST00000586039 MYO5CQ9NQX4 1742 aa26.29■■□□□ 1.8
PKN1-205ENST00000586039 CDK13Q14004 1512 aaKnown RBP26.29■■□□□ 1.8
PKN1-205ENST00000586039 TRAPPC8Q9Y2L5 1435 aa26.28■■□□□ 1.8
PKN1-205ENST00000586039 NCOA1Q15788 1441 aa26.27■■□□□ 1.8
PKN1-205ENST00000586039 UBAP1LF5GYI3 381 aa26.25■■□□□ 1.79
PKN1-205ENST00000586039 AFAP1Q8N556 730 aa26.25■■□□□ 1.79
PKN1-205ENST00000586039 KDM5CP41229 1560 aa26.24■■□□□ 1.79
PKN1-205ENST00000586039 REREQ9P2R6 1566 aa26.23■■□□□ 1.79
PKN1-205ENST00000586039 DIP2CQ9Y2E4 1556 aa26.22■■□□□ 1.79
PKN1-205ENST00000586039 CDK11AQ9UQ88 783 aaPredicted RBP26.18■■□□□ 1.78
PKN1-205ENST00000586039 ARHGAP5Q13017 1502 aa26.18■■□□□ 1.78
PKN1-205ENST00000586039 AGLP35573 1532 aa26.17■■□□□ 1.78
PKN1-205ENST00000586039 CAMSAP1Q5T5Y3 1602 aa26.17■■□□□ 1.78
PKN1-205ENST00000586039 ATP1B4Q9UN42 357 aaPredicted RBP26.16■■□□□ 1.78
PKN1-205ENST00000586039 CNTLNQ9NXG0 1405 aa26.15■■□□□ 1.78
PKN1-205ENST00000586039 ZNF335Q9H4Z2 1342 aaPredicted RBP26.14■■□□□ 1.78
PKN1-205ENST00000586039 ABCA6Q8N139 1617 aa26.14■■□□□ 1.78
PKN1-205ENST00000586039 MLH3Q9UHC1 1453 aa26.14■■□□□ 1.78
PKN1-205ENST00000586039 KIF14Q15058 1648 aa26.12■■□□□ 1.77
PKN1-205ENST00000586039 NCKAP5LQ9HCH0 1330 aa26.11■■□□□ 1.77
PKN1-205ENST00000586039 NPATQ14207 1427 aa26.08■■□□□ 1.77
PKN1-205ENST00000586039 EEA1Q15075 1411 aa26.06■■□□□ 1.76
PKN1-205ENST00000586039 PKD2Q13563 968 aa26.05■■□□□ 1.76
PKN1-205ENST00000586039 CLIP1P30622 1438 aa26.05■■□□□ 1.76
PKN1-205ENST00000586039 TROQ12816 1431 aaPredicted RBP26.05■■□□□ 1.76
PKN1-205ENST00000586039 FMN1Q68DA7 1419 aa26.04■■□□□ 1.76
PKN1-205ENST00000586039 MED1Q15648 1581 aaPredicted RBP26.03■■□□□ 1.76
PKN1-205ENST00000586039 MROH2AA6NES4 1674 aa26.03■■□□□ 1.76
PKN1-205ENST00000586039 ZMYM3Q14202 1370 aa26.01■■□□□ 1.75
PKN1-205ENST00000586039 SCAF1Q9H7N4 1312 aaKnown RBP26.01■■□□□ 1.75
PKN1-205ENST00000586039 CDC42BPBQ9Y5S2 1711 aa26.01■■□□□ 1.75
PKN1-205ENST00000586039 PLA2R1Q13018 1463 aa26■■□□□ 1.75
PKN1-205ENST00000586039 HSPA1LP34931 641 aa26■■□□□ 1.75
PKN1-205ENST00000586039 KIDINS220Q9ULH0 1771 aa25.97■■□□□ 1.75
PKN1-205ENST00000586039 SUPT6HQ7KZ85 1726 aaKnown RBP25.97■■□□□ 1.75
PKN1-205ENST00000586039 ABCC1P33527 1531 aa25.97■■□□□ 1.75
PKN1-205ENST00000586039 PIP4K2BP78356 416 aa25.96■■□□□ 1.75
PKN1-205ENST00000586039 PPP6R1Q9UPN7 881 aa25.96■■□□□ 1.75
PKN1-205ENST00000586039 ITSN2Q9NZM3 1697 aa25.96■■□□□ 1.75
PKN1-205ENST00000586039 ZNF142P52746 1687 aaPredicted RBP25.94■■□□□ 1.74
PKN1-205ENST00000586039 TCOF1Q13428 1488 aaKnown RBP25.94■■□□□ 1.74
PKN1-205ENST00000586039 TOM1O60784 492 aa25.94■■□□□ 1.74
PKN1-205ENST00000586039 PHF23Q9BUL5 403 aaPredicted RBP25.94■■□□□ 1.74
PKN1-205ENST00000586039 MYO3AQ8NEV4 1616 aa25.93■■□□□ 1.74
PKN1-205ENST00000586039 PREX2Q70Z35 1606 aa25.92■■□□□ 1.74
PKN1-205ENST00000586039 CEP170BQ9Y4F5 1589 aaPredicted RBP25.91■■□□□ 1.74
PKN1-205ENST00000586039 CLTCQ00610 1675 aaKnown RBP25.87■■□□□ 1.73
PKN1-205ENST00000586039 PTPRKQ15262 1439 aa25.85■■□□□ 1.73
PKN1-205ENST00000586039 ARHGAP35Q9NRY4 1499 aa25.85■■□□□ 1.73
PKN1-205ENST00000586039 CPS1P31327 1500 aa25.83■■□□□ 1.73
PKN1-205ENST00000586039 SAMD9LQ8IVG5 1584 aa25.83■■□□□ 1.73
PKN1-205ENST00000586039 LRRIQ1Q96JM4 1722 aa25.83■■□□□ 1.72
PKN1-205ENST00000586039 UBTFP17480 764 aaKnown RBP25.82■■□□□ 1.72
PKN1-205ENST00000586039 SPAG9O60271 1321 aaKnown RBP25.82■■□□□ 1.72
PKN1-205ENST00000586039 ZNF777Q9ULD5 760 aaPredicted RBP25.79■■□□□ 1.72
PKN1-205ENST00000586039 GGT6Q6P531 493 aa25.78■■□□□ 1.72
PKN1-205ENST00000586039 CDC42BPAQ5VT25 1732 aa25.77■■□□□ 1.72
PKN1-205ENST00000586039 A2ML1A8K2U0 1454 aa25.76■■□□□ 1.71
PKN1-205ENST00000586039 SHANK2Q9UPX8 1470 aa25.76■■□□□ 1.71
PKN1-205ENST00000586039 EHMT2Q96KQ7 1210 aa25.75■■□□□ 1.71
PKN1-205ENST00000586039 DNMT1P26358 1616 aaKnown RBP25.74■■□□□ 1.71
PKN1-205ENST00000586039 PLXNC1O60486 1568 aa25.73■■□□□ 1.71
PKN1-205ENST00000586039 A2MP01023 1474 aa25.73■■□□□ 1.71
PKN1-205ENST00000586039 POLR1AO95602 1720 aaPredicted RBP25.73■■□□□ 1.71
PKN1-205ENST00000586039 ATP7AQ04656 1500 aa25.73■■□□□ 1.71
PKN1-205ENST00000586039 SYCP2Q9BX26 1530 aa25.73■■□□□ 1.71
PKN1-205ENST00000586039 CCDC18Q5T9S5 1454 aa25.72■■□□□ 1.71
PKN1-205ENST00000586039 HNRNPMP52272 730 aaKnown RBP eCLIP25.71■■□□□ 1.71
PKN1-205ENST00000586039 NEURL4Q96JN8 1562 aa25.67■■□□□ 1.7
PKN1-205ENST00000586039 INO80Q9ULG1 1556 aaPredicted RBP25.65■■□□□ 1.7
PKN1-205ENST00000586039 ANKLE2Q86XL3 938 aa25.64■■□□□ 1.7
PKN1-205ENST00000586039 CASKIN1Q8WXD9 1431 aa25.63■■□□□ 1.69
PKN1-205ENST00000586039 KIAA1107Q9UPP5 1409 aa25.63■■□□□ 1.69
PKN1-205ENST00000586039 SENP3Q9H4L4 574 aaPredicted RBP25.63■■□□□ 1.69
PKN1-205ENST00000586039 PLEKHH2Q8IVE3 1493 aa25.62■■□□□ 1.69
PKN1-205ENST00000586039 GPATCH8Q9UKJ3 1502 aaKnown RBP25.62■■□□□ 1.69
PKN1-205ENST00000586039 VWDEQ8N2E2 1590 aa25.61■■□□□ 1.69
PKN1-205ENST00000586039 ALKQ9UM73 1620 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms