RNA–Protein interactions for RNA: ENST00000585900.1

HMG20B-216, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-216ENST00000585900 POGZQ7Z3K3 1410 aa29.36■■■□□ 2.29
HMG20B-216ENST00000585900 ARHGAP5Q13017 1502 aa29.35■■■□□ 2.29
HMG20B-216ENST00000585900 MAGI2Q86UL8 1455 aa29.34■■■□□ 2.29
HMG20B-216ENST00000585900 ZFYVE16Q7Z3T8 1539 aa29.34■■■□□ 2.29
HMG20B-216ENST00000585900 ADAMTSL3P82987 1691 aa29.28■■■□□ 2.28
HMG20B-216ENST00000585900 BCORL1Q5H9F3 1711 aa29.28■■■□□ 2.28
HMG20B-216ENST00000585900 YEATS2Q9ULM3 1422 aa29.26■■■□□ 2.27
HMG20B-216ENST00000585900 ZNF518AQ6AHZ1 1483 aa29.25■■■□□ 2.27
HMG20B-216ENST00000585900 HECW2Q9P2P5 1572 aa29.24■■■□□ 2.27
HMG20B-216ENST00000585900 PREX2Q70Z35 1606 aa29.23■■■□□ 2.27
HMG20B-216ENST00000585900 PTPRMP28827 1452 aa29.23■■■□□ 2.27
HMG20B-216ENST00000585900 CEP162Q5TB80 1403 aa29.21■■■□□ 2.27
HMG20B-216ENST00000585900 MADDQ8WXG6 1647 aa29.2■■■□□ 2.27
HMG20B-216ENST00000585900 CDC42BPBQ9Y5S2 1711 aa29.18■■■□□ 2.26
HMG20B-216ENST00000585900 ATP10AO60312 1499 aa29.16■■■□□ 2.26
HMG20B-216ENST00000585900 KDM5CP41229 1560 aa29.15■■■□□ 2.26
HMG20B-216ENST00000585900 C9orf84Q5VXU9 1444 aa29.15■■■□□ 2.26
HMG20B-216ENST00000585900 MYT1LQ9UL68 1186 aa29.15■■■□□ 2.26
HMG20B-216ENST00000585900 ABCC1P33527 1531 aa29.14■■■□□ 2.25
HMG20B-216ENST00000585900 AFAP1Q8N556 730 aa29.13■■■□□ 2.25
HMG20B-216ENST00000585900 MTUS2Q5JR59 1369 aa29.13■■■□□ 2.25
HMG20B-216ENST00000585900 CDC42BPAQ5VT25 1732 aa29.11■■■□□ 2.25
HMG20B-216ENST00000585900 RIMS1Q86UR5 1692 aaKnown RBP29.1■■■□□ 2.25
HMG20B-216ENST00000585900 MLECQ14165 292 aa29.08■■■□□ 2.25
HMG20B-216ENST00000585900 SIGLEC1Q9BZZ2 1709 aa29.08■■■□□ 2.25
HMG20B-216ENST00000585900 ITSN2Q9NZM3 1697 aa29.07■■■□□ 2.24
HMG20B-216ENST00000585900 GPATCH8Q9UKJ3 1502 aaKnown RBP29.05■■■□□ 2.24
HMG20B-216ENST00000585900 MLH3Q9UHC1 1453 aa29.05■■■□□ 2.24
HMG20B-216ENST00000585900 CCNB3Q8WWL7 1395 aa29.05■■■□□ 2.24
HMG20B-216ENST00000585900 ZNF777Q9ULD5 760 aaPredicted RBP29.05■■■□□ 2.24
HMG20B-216ENST00000585900 TRAPPC8Q9Y2L5 1435 aa29.04■■■□□ 2.24
HMG20B-216ENST00000585900 EHBP1L1Q8N3D4 1523 aa29.04■■■□□ 2.24
HMG20B-216ENST00000585900 ARHGEF12Q9NZN5 1544 aa29.04■■■□□ 2.24
HMG20B-216ENST00000585900 DIP2CQ9Y2E4 1556 aa29.02■■■□□ 2.24
HMG20B-216ENST00000585900 CFDP1Q9UEE9 299 aaPredicted RBP29■■■□□ 2.23
HMG20B-216ENST00000585900 FER1L4A9Z1Z3 1794 aa29■■■□□ 2.23
HMG20B-216ENST00000585900 SAMD9LQ8IVG5 1584 aa29■■■□□ 2.23
HMG20B-216ENST00000585900 SYCP2Q9BX26 1530 aa28.99■■■□□ 2.23
HMG20B-216ENST00000585900 ABCA6Q8N139 1617 aa28.98■■■□□ 2.23
HMG20B-216ENST00000585900 PLEKHH2Q8IVE3 1493 aa28.98■■■□□ 2.23
HMG20B-216ENST00000585900 REREQ9P2R6 1566 aa28.98■■■□□ 2.23
HMG20B-216ENST00000585900 PLPPR3Q6T4P5 718 aa28.97■■■□□ 2.23
HMG20B-216ENST00000585900 LOC105371045A0A1W2PR82 267 aa28.96■■■□□ 2.23
HMG20B-216ENST00000585900 KIAA1107Q9UPP5 1409 aa28.94■■■□□ 2.22
HMG20B-216ENST00000585900 TIAM1Q13009 1591 aa28.92■■■□□ 2.22
HMG20B-216ENST00000585900 SPAG9O60271 1321 aaKnown RBP28.91■■■□□ 2.22
HMG20B-216ENST00000585900 LMTK3Q96Q04 1460 aa28.91■■■□□ 2.22
HMG20B-216ENST00000585900 HNRNPMP52272 730 aaKnown RBP eCLIP28.9■■■□□ 2.22
HMG20B-216ENST00000585900 VPS8Q8N3P4 1428 aa28.9■■■□□ 2.22
HMG20B-216ENST00000585900 KIDINS220Q9ULH0 1771 aa28.9■■■□□ 2.22
HMG20B-216ENST00000585900 AGLP35573 1532 aa28.89■■■□□ 2.21
HMG20B-216ENST00000585900 SUPT6HQ7KZ85 1726 aaKnown RBP28.85■■■□□ 2.21
HMG20B-216ENST00000585900 ESF1Q9H501 851 aaKnown RBP28.84■■■□□ 2.21
HMG20B-216ENST00000585900 ATP7AQ04656 1500 aa28.84■■■□□ 2.21
HMG20B-216ENST00000585900 NCOA2Q15596 1464 aa28.82■■■□□ 2.2
HMG20B-216ENST00000585900 INO80Q9ULG1 1556 aaPredicted RBP28.79■■■□□ 2.2
HMG20B-216ENST00000585900 ZNF644Q9H582 1327 aaPredicted RBP28.77■■■□□ 2.2
HMG20B-216ENST00000585900 CEBPAP49715 358 aaPredicted RBP28.75■■■□□ 2.19
HMG20B-216ENST00000585900 CNTLNQ9NXG0 1405 aa28.75■■■□□ 2.19
HMG20B-216ENST00000585900 LRRC9Q6ZRR7 1453 aa28.74■■■□□ 2.19
HMG20B-216ENST00000585900 A2MP01023 1474 aa28.73■■■□□ 2.19
HMG20B-216ENST00000585900 HSPA2P54652 639 aa28.73■■■□□ 2.19
HMG20B-216ENST00000585900 MBD5Q9P267 1494 aa28.72■■■□□ 2.19
HMG20B-216ENST00000585900 PREX1Q8TCU6 1659 aa28.72■■■□□ 2.19
HMG20B-216ENST00000585900 MAP3K1Q13233 1512 aa28.71■■■□□ 2.19
HMG20B-216ENST00000585900 CAMSAP2Q08AD1 1489 aa28.71■■■□□ 2.19
HMG20B-216ENST00000585900 PLXNC1O60486 1568 aa28.7■■■□□ 2.18
HMG20B-216ENST00000585900 CCDC141Q6ZP82 1450 aa28.68■■■□□ 2.18
HMG20B-216ENST00000585900 RTEL1-TNFRSF6BF6WH68 1400 aa28.68■■■□□ 2.18
HMG20B-216ENST00000585900 UHRF1BP1Q6BDS2 1440 aa28.68■■■□□ 2.18
HMG20B-216ENST00000585900 ADGBQ8N7X0 1667 aa28.67■■■□□ 2.18
HMG20B-216ENST00000585900 C3P01024 1663 aa28.66■■■□□ 2.18
HMG20B-216ENST00000585900 RSPH4AQ5TD94 716 aa28.65■■■□□ 2.18
HMG20B-216ENST00000585900 ILDR1Q86SU0 546 aaPredicted RBP28.65■■■□□ 2.18
HMG20B-216ENST00000585900 APLP2Q06481 763 aa28.62■■■□□ 2.17
HMG20B-216ENST00000585900 MROH2AA6NES4 1674 aa28.61■■■□□ 2.17
HMG20B-216ENST00000585900 ARHGEF5Q12774 1597 aa28.58■■■□□ 2.17
HMG20B-216ENST00000585900 KANK4Q5T7N3 995 aaPredicted RBP28.58■■■□□ 2.17
HMG20B-216ENST00000585900 GGT6Q6P531 493 aa28.58■■■□□ 2.17
HMG20B-216ENST00000585900 SETD1BQ9UPS6 1966 aaKnown RBP28.58■■■□□ 2.17
HMG20B-216ENST00000585900 DHX29Q7Z478 1369 aaKnown RBP28.56■■■□□ 2.16
HMG20B-216ENST00000585900 MYOM3Q5VTT5 1437 aa28.55■■■□□ 2.16
HMG20B-216ENST00000585900 ZMYM3Q14202 1370 aa28.55■■■□□ 2.16
HMG20B-216ENST00000585900 TSPY4P0CV99 314 aa28.55■■■□□ 2.16
HMG20B-216ENST00000585900 TSPY10P0CW01 314 aa28.55■■■□□ 2.16
HMG20B-216ENST00000585900 NPATQ14207 1427 aa28.54■■■□□ 2.16
HMG20B-216ENST00000585900 PPP6R1Q9UPN7 881 aa28.54■■■□□ 2.16
HMG20B-216ENST00000585900 MIA2Q96PC5 1412 aa28.53■■■□□ 2.16
HMG20B-216ENST00000585900 CLTCQ00610 1675 aaKnown RBP28.53■■■□□ 2.16
HMG20B-216ENST00000585900 DMRT2Q9Y5R5 561 aa28.47■■■□□ 2.15
HMG20B-216ENST00000585900 KIF3BO15066 747 aa28.46■■■□□ 2.15
HMG20B-216ENST00000585900 FBXO41Q8TF61 875 aa28.44■■■□□ 2.14
HMG20B-216ENST00000585900 MAST1Q9Y2H9 1570 aa28.43■■■□□ 2.14
HMG20B-216ENST00000585900 FAM135AQ9P2D6 1515 aa28.43■■■□□ 2.14
HMG20B-216ENST00000585900 PTPRKQ15262 1439 aa28.41■■■□□ 2.14
HMG20B-216ENST00000585900 KDM5DQ9BY66 1539 aa28.4■■■□□ 2.14
HMG20B-216ENST00000585900 STRCQ7RTU9 1775 aa28.39■■■□□ 2.13
HMG20B-216ENST00000585900 MYO3AQ8NEV4 1616 aa28.37■■■□□ 2.13
HMG20B-216ENST00000585900 NCOA1Q15788 1441 aa28.35■■■□□ 2.13
HMG20B-216ENST00000585900 WASHC2CQ9Y4E1 1318 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms