RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 EFCAB5A4FU69 1503 aa19.56■□□□□ 0.72
NUP85-224ENST00000583948 ARHGEF12Q9NZN5 1544 aa19.56■□□□□ 0.72
NUP85-224ENST00000583948 PLEKHD1A6NEE1 506 aa19.55■□□□□ 0.72
NUP85-224ENST00000583948 FAM9AQ8IZU1 332 aaPredicted RBP19.55■□□□□ 0.72
NUP85-224ENST00000583948 SCAPERQ9BY12 1400 aa19.54■□□□□ 0.72
NUP85-224ENST00000583948 LTBP4Q8N2S1 1624 aa19.52■□□□□ 0.72
NUP85-224ENST00000583948 CFAP74Q9C0B2 1584 aa19.51■□□□□ 0.71
NUP85-224ENST00000583948 ATP10AO60312 1499 aa19.49■□□□□ 0.71
NUP85-224ENST00000583948 DMRT2Q9Y5R5 561 aa19.49■□□□□ 0.71
NUP85-224ENST00000583948 CDK13Q14004 1512 aaKnown RBP19.49■□□□□ 0.71
NUP85-224ENST00000583948 UHRF1BP1Q6BDS2 1440 aa19.49■□□□□ 0.71
NUP85-224ENST00000583948 MAGI2Q86UL8 1455 aa19.47■□□□□ 0.71
NUP85-224ENST00000583948 C9orf84Q5VXU9 1444 aa19.46■□□□□ 0.71
NUP85-224ENST00000583948 AFAP1Q8N556 730 aa19.44■□□□□ 0.7
NUP85-224ENST00000583948 C3P01024 1663 aa19.43■□□□□ 0.7
NUP85-224ENST00000583948 PTPRTO14522 1441 aa19.42■□□□□ 0.7
NUP85-224ENST00000583948 MYT1LQ9UL68 1186 aa19.41■□□□□ 0.7
NUP85-224ENST00000583948 PLCH2O75038 1416 aa19.41■□□□□ 0.7
NUP85-224ENST00000583948 ZNF335Q9H4Z2 1342 aaPredicted RBP19.4■□□□□ 0.7
NUP85-224ENST00000583948 SETD1BQ9UPS6 1966 aaKnown RBP19.39■□□□□ 0.7
NUP85-224ENST00000583948 UBAP1LF5GYI3 381 aa19.39■□□□□ 0.69
NUP85-224ENST00000583948 NCKAP5LQ9HCH0 1330 aa19.39■□□□□ 0.69
NUP85-224ENST00000583948 ATP1B4Q9UN42 357 aaPredicted RBP19.38■□□□□ 0.69
NUP85-224ENST00000583948 CSRNP3Q8WYN3 585 aa19.37■□□□□ 0.69
NUP85-224ENST00000583948 EHMT2Q96KQ7 1210 aa19.36■□□□□ 0.69
NUP85-224ENST00000583948 KIF14Q15058 1648 aa19.35■□□□□ 0.69
NUP85-224ENST00000583948 DIP2CQ9Y2E4 1556 aa19.35■□□□□ 0.69
NUP85-224ENST00000583948 NCOA1Q15788 1441 aa19.34■□□□□ 0.69
NUP85-224ENST00000583948 ABCA6Q8N139 1617 aa19.33■□□□□ 0.69
NUP85-224ENST00000583948 EFCAB2Q5VUJ9 269 aa19.33■□□□□ 0.68
NUP85-224ENST00000583948 MYO5CQ9NQX4 1742 aa19.33■□□□□ 0.68
NUP85-224ENST00000583948 CAMSAP1Q5T5Y3 1602 aa19.32■□□□□ 0.68
NUP85-224ENST00000583948 TRAPPC8Q9Y2L5 1435 aa19.29■□□□□ 0.68
NUP85-224ENST00000583948 HSPA1LP34931 641 aa19.28■□□□□ 0.68
NUP85-224ENST00000583948 IQSEC2Q5JU85 1478 aa19.28■□□□□ 0.68
NUP85-224ENST00000583948 KDM5CP41229 1560 aa19.27■□□□□ 0.68
NUP85-224ENST00000583948 SCAF1Q9H7N4 1312 aaKnown RBP19.27■□□□□ 0.68
NUP85-224ENST00000583948 ZNF518AQ6AHZ1 1483 aa19.27■□□□□ 0.67
NUP85-224ENST00000583948 ARHGAP5Q13017 1502 aa19.26■□□□□ 0.67
NUP85-224ENST00000583948 PIP4K2BP78356 416 aa19.26■□□□□ 0.67
NUP85-224ENST00000583948 MED1Q15648 1581 aaPredicted RBP19.26■□□□□ 0.67
NUP85-224ENST00000583948 SENP3Q9H4L4 574 aaPredicted RBP19.25■□□□□ 0.67
NUP85-224ENST00000583948 ESF1Q9H501 851 aaKnown RBP19.25■□□□□ 0.67
NUP85-224ENST00000583948 CDC42BPBQ9Y5S2 1711 aa19.21■□□□□ 0.67
NUP85-224ENST00000583948 LRRIQ1Q96JM4 1722 aa19.19■□□□□ 0.66
NUP85-224ENST00000583948 KIDINS220Q9ULH0 1771 aa19.18■□□□□ 0.66
NUP85-224ENST00000583948 REREQ9P2R6 1566 aa19.18■□□□□ 0.66
NUP85-224ENST00000583948 ZMYM3Q14202 1370 aa19.16■□□□□ 0.66
NUP85-224ENST00000583948 MLH3Q9UHC1 1453 aa19.16■□□□□ 0.66
NUP85-224ENST00000583948 AGLP35573 1532 aa19.15■□□□□ 0.66
NUP85-224ENST00000583948 SUPT6HQ7KZ85 1726 aaKnown RBP19.15■□□□□ 0.66
NUP85-224ENST00000583948 CLTCQ00610 1675 aaKnown RBP19.13■□□□□ 0.65
NUP85-224ENST00000583948 ITSN2Q9NZM3 1697 aa19.13■□□□□ 0.65
NUP85-224ENST00000583948 MYO3AQ8NEV4 1616 aa19.12■□□□□ 0.65
NUP85-224ENST00000583948 TROQ12816 1431 aaPredicted RBP19.12■□□□□ 0.65
NUP85-224ENST00000583948 ABCC1P33527 1531 aa19.11■□□□□ 0.65
NUP85-224ENST00000583948 PPP6R1Q9UPN7 881 aa19.1■□□□□ 0.65
NUP85-224ENST00000583948 TCOF1Q13428 1488 aaKnown RBP19.09■□□□□ 0.65
NUP85-224ENST00000583948 CNTLNQ9NXG0 1405 aa19.08■□□□□ 0.65
NUP85-224ENST00000583948 CEP170BQ9Y4F5 1589 aaPredicted RBP19.08■□□□□ 0.65
NUP85-224ENST00000583948 PHF23Q9BUL5 403 aaPredicted RBP19.08■□□□□ 0.64
NUP85-224ENST00000583948 ZNF777Q9ULD5 760 aaPredicted RBP19.08■□□□□ 0.64
NUP85-224ENST00000583948 NPATQ14207 1427 aa19.08■□□□□ 0.64
NUP85-224ENST00000583948 MROH2AA6NES4 1674 aa19.08■□□□□ 0.64
NUP85-224ENST00000583948 ARHGAP35Q9NRY4 1499 aa19.07■□□□□ 0.64
NUP85-224ENST00000583948 ZNF142P52746 1687 aaPredicted RBP19.06■□□□□ 0.64
NUP85-224ENST00000583948 PKD2Q13563 968 aa19.06■□□□□ 0.64
NUP85-224ENST00000583948 CDK11AQ9UQ88 783 aaPredicted RBP19.06■□□□□ 0.64
NUP85-224ENST00000583948 PREX2Q70Z35 1606 aa19.06■□□□□ 0.64
NUP85-224ENST00000583948 PTPRKQ15262 1439 aa19.06■□□□□ 0.64
NUP85-224ENST00000583948 ALKQ9UM73 1620 aa19.05■□□□□ 0.64
NUP85-224ENST00000583948 HNRNPMP52272 730 aaKnown RBP eCLIP19.05■□□□□ 0.64
NUP85-224ENST00000583948 GGT6Q6P531 493 aa19.05■□□□□ 0.64
NUP85-224ENST00000583948 SAMD9LQ8IVG5 1584 aa19.04■□□□□ 0.64
NUP85-224ENST00000583948 PLA2R1Q13018 1463 aa19.03■□□□□ 0.64
NUP85-224ENST00000583948 CDC42BPAQ5VT25 1732 aa19.03■□□□□ 0.64
NUP85-224ENST00000583948 CLIP1P30622 1438 aa19.02■□□□□ 0.64
NUP85-224ENST00000583948 TOM1O60784 492 aa19.01■□□□□ 0.63
NUP85-224ENST00000583948 UBTFP17480 764 aaKnown RBP19.01■□□□□ 0.63
NUP85-224ENST00000583948 FMN1Q68DA7 1419 aa19■□□□□ 0.63
NUP85-224ENST00000583948 RGS17Q9UGC6 210 aaPredicted RBP19■□□□□ 0.63
NUP85-224ENST00000583948 NEURL4Q96JN8 1562 aa18.99■□□□□ 0.63
NUP85-224ENST00000583948 FBXO31Q5XUX0 539 aaPredicted RBP18.99■□□□□ 0.63
NUP85-224ENST00000583948 DNMT1P26358 1616 aaKnown RBP18.99■□□□□ 0.63
NUP85-224ENST00000583948 SYCP2Q9BX26 1530 aa18.99■□□□□ 0.63
NUP85-224ENST00000583948 SPAG9O60271 1321 aaKnown RBP18.98■□□□□ 0.63
NUP85-224ENST00000583948 SHANK2Q9UPX8 1470 aa18.97■□□□□ 0.63
NUP85-224ENST00000583948 EEA1Q15075 1411 aa18.94■□□□□ 0.62
NUP85-224ENST00000583948 POLR1AO95602 1720 aaPredicted RBP18.94■□□□□ 0.62
NUP85-224ENST00000583948 VWDEQ8N2E2 1590 aa18.93■□□□□ 0.62
NUP85-224ENST00000583948 A2ML1A8K2U0 1454 aa18.92■□□□□ 0.62
NUP85-224ENST00000583948 A2MP01023 1474 aa18.92■□□□□ 0.62
NUP85-224ENST00000583948 STRCP1A6NGW2 1772 aa18.92■□□□□ 0.62
NUP85-224ENST00000583948 ATP7AQ04656 1500 aa18.92■□□□□ 0.62
NUP85-224ENST00000583948 PLXNC1O60486 1568 aa18.92■□□□□ 0.62
NUP85-224ENST00000583948 CPS1P31327 1500 aa18.91■□□□□ 0.62
NUP85-224ENST00000583948 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.91■□□□□ 0.62
NUP85-224ENST00000583948 INO80Q9ULG1 1556 aaPredicted RBP18.88■□□□□ 0.61
NUP85-224ENST00000583948 ZNF644Q9H582 1327 aaPredicted RBP18.87■□□□□ 0.61
NUP85-224ENST00000583948 GPATCH8Q9UKJ3 1502 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms