RNA–Protein interactions for RNA: ENST00000583648.5

KPNB1-214, Transcript of karyopherin subunit beta 1, humanhuman

TSL 4

Gene KPNB1, Length 896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-214ENST00000583648 ZFYVE16Q7Z3T8 1539 aa23.49■■□□□ 1.35
KPNB1-214ENST00000583648 PTPRMP28827 1452 aa23.49■■□□□ 1.35
KPNB1-214ENST00000583648 YEATS2Q9ULM3 1422 aa23.48■■□□□ 1.35
KPNB1-214ENST00000583648 ADAMTSL3P82987 1691 aa23.48■■□□□ 1.35
KPNB1-214ENST00000583648 ARHGAP5Q13017 1502 aa23.47■■□□□ 1.35
KPNB1-214ENST00000583648 ZNF518AQ6AHZ1 1483 aa23.46■■□□□ 1.35
KPNB1-214ENST00000583648 MYO5CQ9NQX4 1742 aa23.45■■□□□ 1.34
KPNB1-214ENST00000583648 AFAP1Q8N556 730 aa23.44■■□□□ 1.34
KPNB1-214ENST00000583648 ATP10AO60312 1499 aa23.43■■□□□ 1.34
KPNB1-214ENST00000583648 BCORL1Q5H9F3 1711 aa23.42■■□□□ 1.34
KPNB1-214ENST00000583648 LRRIQ1Q96JM4 1722 aa23.42■■□□□ 1.34
KPNB1-214ENST00000583648 HECW2Q9P2P5 1572 aa23.41■■□□□ 1.34
KPNB1-214ENST00000583648 C9orf84Q5VXU9 1444 aa23.4■■□□□ 1.34
KPNB1-214ENST00000583648 CEP162Q5TB80 1403 aa23.37■■□□□ 1.33
KPNB1-214ENST00000583648 KDM5CP41229 1560 aa23.36■■□□□ 1.33
KPNB1-214ENST00000583648 MLH3Q9UHC1 1453 aa23.36■■□□□ 1.33
KPNB1-214ENST00000583648 MYT1LQ9UL68 1186 aa23.35■■□□□ 1.33
KPNB1-214ENST00000583648 MADDQ8WXG6 1647 aa23.34■■□□□ 1.33
KPNB1-214ENST00000583648 MTUS2Q5JR59 1369 aa23.34■■□□□ 1.33
KPNB1-214ENST00000583648 MLECQ14165 292 aa23.33■■□□□ 1.33
KPNB1-214ENST00000583648 PREX2Q70Z35 1606 aa23.33■■□□□ 1.32
KPNB1-214ENST00000583648 GPATCH8Q9UKJ3 1502 aaKnown RBP23.33■■□□□ 1.32
KPNB1-214ENST00000583648 TRAPPC8Q9Y2L5 1435 aa23.32■■□□□ 1.32
KPNB1-214ENST00000583648 CFDP1Q9UEE9 299 aaPredicted RBP23.31■■□□□ 1.32
KPNB1-214ENST00000583648 ABCC1P33527 1531 aa23.31■■□□□ 1.32
KPNB1-214ENST00000583648 ARHGEF12Q9NZN5 1544 aa23.31■■□□□ 1.32
KPNB1-214ENST00000583648 CDC42BPBQ9Y5S2 1711 aa23.3■■□□□ 1.32
KPNB1-214ENST00000583648 CCNB3Q8WWL7 1395 aa23.3■■□□□ 1.32
KPNB1-214ENST00000583648 ZNF777Q9ULD5 760 aaPredicted RBP23.29■■□□□ 1.32
KPNB1-214ENST00000583648 KIAA1107Q9UPP5 1409 aa23.29■■□□□ 1.32
KPNB1-214ENST00000583648 PLEKHH2Q8IVE3 1493 aa23.27■■□□□ 1.32
KPNB1-214ENST00000583648 REREQ9P2R6 1566 aa23.26■■□□□ 1.31
KPNB1-214ENST00000583648 LOC105371045A0A1W2PR82 267 aa23.23■■□□□ 1.31
KPNB1-214ENST00000583648 HNRNPMP52272 730 aaKnown RBP eCLIP23.23■■□□□ 1.31
KPNB1-214ENST00000583648 SPAG9O60271 1321 aaKnown RBP23.23■■□□□ 1.31
KPNB1-214ENST00000583648 SIGLEC1Q9BZZ2 1709 aa23.22■■□□□ 1.31
KPNB1-214ENST00000583648 AGLP35573 1532 aa23.22■■□□□ 1.31
KPNB1-214ENST00000583648 DIP2CQ9Y2E4 1556 aa23.22■■□□□ 1.31
KPNB1-214ENST00000583648 RIMS1Q86UR5 1692 aaKnown RBP23.22■■□□□ 1.31
KPNB1-214ENST00000583648 CDC42BPAQ5VT25 1732 aa23.22■■□□□ 1.31
KPNB1-214ENST00000583648 EHBP1L1Q8N3D4 1523 aa23.2■■□□□ 1.3
KPNB1-214ENST00000583648 LMTK3Q96Q04 1460 aa23.2■■□□□ 1.3
KPNB1-214ENST00000583648 ITSN2Q9NZM3 1697 aa23.19■■□□□ 1.3
KPNB1-214ENST00000583648 SAMD9LQ8IVG5 1584 aa23.18■■□□□ 1.3
KPNB1-214ENST00000583648 PLPPR3Q6T4P5 718 aa23.17■■□□□ 1.3
KPNB1-214ENST00000583648 ESF1Q9H501 851 aaKnown RBP23.16■■□□□ 1.3
KPNB1-214ENST00000583648 SYCP2Q9BX26 1530 aa23.16■■□□□ 1.3
KPNB1-214ENST00000583648 VPS8Q8N3P4 1428 aa23.15■■□□□ 1.3
KPNB1-214ENST00000583648 ABCA6Q8N139 1617 aa23.15■■□□□ 1.3
KPNB1-214ENST00000583648 RSPH4AQ5TD94 716 aa23.13■■□□□ 1.29
KPNB1-214ENST00000583648 CEBPAP49715 358 aaPredicted RBP23.12■■□□□ 1.29
KPNB1-214ENST00000583648 KIDINS220Q9ULH0 1771 aa23.12■■□□□ 1.29
KPNB1-214ENST00000583648 CNTLNQ9NXG0 1405 aa23.11■■□□□ 1.29
KPNB1-214ENST00000583648 ILDR1Q86SU0 546 aaPredicted RBP23.11■■□□□ 1.29
KPNB1-214ENST00000583648 FER1L4A9Z1Z3 1794 aa23.11■■□□□ 1.29
KPNB1-214ENST00000583648 ZNF644Q9H582 1327 aaPredicted RBP23.1■■□□□ 1.29
KPNB1-214ENST00000583648 TIAM1Q13009 1591 aa23.1■■□□□ 1.29
KPNB1-214ENST00000583648 HSPA2P54652 639 aa23.09■■□□□ 1.29
KPNB1-214ENST00000583648 MBD5Q9P267 1494 aa23.09■■□□□ 1.29
KPNB1-214ENST00000583648 NCOA2Q15596 1464 aa23.08■■□□□ 1.29
KPNB1-214ENST00000583648 RTEL1-TNFRSF6BF6WH68 1400 aa23.08■■□□□ 1.28
KPNB1-214ENST00000583648 PPP6R1Q9UPN7 881 aa23.07■■□□□ 1.28
KPNB1-214ENST00000583648 ATP7AQ04656 1500 aa23.07■■□□□ 1.28
KPNB1-214ENST00000583648 MAP3K1Q13233 1512 aa23.05■■□□□ 1.28
KPNB1-214ENST00000583648 A2MP01023 1474 aa23.05■■□□□ 1.28
KPNB1-214ENST00000583648 LRRC9Q6ZRR7 1453 aa23.03■■□□□ 1.28
KPNB1-214ENST00000583648 UHRF1BP1Q6BDS2 1440 aa23.02■■□□□ 1.28
KPNB1-214ENST00000583648 INO80Q9ULG1 1556 aaPredicted RBP23.01■■□□□ 1.27
KPNB1-214ENST00000583648 SUPT6HQ7KZ85 1726 aaKnown RBP23■■□□□ 1.27
KPNB1-214ENST00000583648 DMRT2Q9Y5R5 561 aa22.99■■□□□ 1.27
KPNB1-214ENST00000583648 DHX29Q7Z478 1369 aaKnown RBP22.99■■□□□ 1.27
KPNB1-214ENST00000583648 PLXNC1O60486 1568 aa22.98■■□□□ 1.27
KPNB1-214ENST00000583648 ZMYM3Q14202 1370 aa22.98■■□□□ 1.27
KPNB1-214ENST00000583648 CCDC141Q6ZP82 1450 aa22.98■■□□□ 1.27
KPNB1-214ENST00000583648 TSPY4P0CV99 314 aa22.97■■□□□ 1.27
KPNB1-214ENST00000583648 TSPY10P0CW01 314 aa22.97■■□□□ 1.27
KPNB1-214ENST00000583648 KANK4Q5T7N3 995 aaPredicted RBP22.96■■□□□ 1.27
KPNB1-214ENST00000583648 GGT6Q6P531 493 aa22.96■■□□□ 1.27
KPNB1-214ENST00000583648 FBXO41Q8TF61 875 aa22.96■■□□□ 1.27
KPNB1-214ENST00000583648 NPATQ14207 1427 aa22.96■■□□□ 1.27
KPNB1-214ENST00000583648 CAMSAP2Q08AD1 1489 aa22.96■■□□□ 1.27
KPNB1-214ENST00000583648 SETD1BQ9UPS6 1966 aaKnown RBP22.96■■□□□ 1.27
KPNB1-214ENST00000583648 PREX1Q8TCU6 1659 aa22.94■■□□□ 1.26
KPNB1-214ENST00000583648 APLP2Q06481 763 aa22.94■■□□□ 1.26
KPNB1-214ENST00000583648 MIA2Q96PC5 1412 aa22.92■■□□□ 1.26
KPNB1-214ENST00000583648 C3P01024 1663 aa22.9■■□□□ 1.26
KPNB1-214ENST00000583648 ARHGEF5Q12774 1597 aa22.89■■□□□ 1.25
KPNB1-214ENST00000583648 ADGBQ8N7X0 1667 aa22.88■■□□□ 1.25
KPNB1-214ENST00000583648 MYOM3Q5VTT5 1437 aa22.88■■□□□ 1.25
KPNB1-214ENST00000583648 MROH2AA6NES4 1674 aa22.87■■□□□ 1.25
KPNB1-214ENST00000583648 KIF3BO15066 747 aa22.87■■□□□ 1.25
KPNB1-214ENST00000583648 PTPRKQ15262 1439 aa22.83■■□□□ 1.25
KPNB1-214ENST00000583648 PTPRTO14522 1441 aa22.82■■□□□ 1.24
KPNB1-214ENST00000583648 CERKQ8TCT0 537 aa22.82■■□□□ 1.24
KPNB1-214ENST00000583648 FAM135AQ9P2D6 1515 aa22.82■■□□□ 1.24
KPNB1-214ENST00000583648 WASHC2CQ9Y4E1 1318 aa22.8■■□□□ 1.24
KPNB1-214ENST00000583648 NCOA1Q15788 1441 aa22.78■■□□□ 1.24
KPNB1-214ENST00000583648 MAST1Q9Y2H9 1570 aa22.76■■□□□ 1.23
KPNB1-214ENST00000583648 CLTCQ00610 1675 aaKnown RBP22.76■■□□□ 1.23
KPNB1-214ENST00000583648 PKD2Q13563 968 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms