RNA–Protein interactions for RNA: ENST00000582736.1

RPL23A-209, Transcript of ribosomal protein L23a, humanhuman

TSL 1 (best)

Gene RPL23A, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23A-209ENST00000582736 SPATA31D1Q6ZQQ2 1576 aa25.07■■□□□ 1.6
RPL23A-209ENST00000582736 ARHGEF12Q9NZN5 1544 aa25.07■■□□□ 1.6
RPL23A-209ENST00000582736 STRCQ7RTU9 1775 aa25.04■■□□□ 1.6
RPL23A-209ENST00000582736 PLEKHD1A6NEE1 506 aa25.01■■□□□ 1.59
RPL23A-209ENST00000582736 CEBPAP49715 358 aaPredicted RBP24.96■■□□□ 1.59
RPL23A-209ENST00000582736 ATP10AO60312 1499 aa24.96■■□□□ 1.59
RPL23A-209ENST00000582736 SCAPERQ9BY12 1400 aa24.95■■□□□ 1.59
RPL23A-209ENST00000582736 DMRT2Q9Y5R5 561 aa24.95■■□□□ 1.58
RPL23A-209ENST00000582736 C9orf84Q5VXU9 1444 aa24.95■■□□□ 1.58
RPL23A-209ENST00000582736 UHRF1BP1Q6BDS2 1440 aa24.91■■□□□ 1.58
RPL23A-209ENST00000582736 PLCH2O75038 1416 aa24.89■■□□□ 1.58
RPL23A-209ENST00000582736 PTPRTO14522 1441 aa24.88■■□□□ 1.57
RPL23A-209ENST00000582736 LTBP4Q8N2S1 1624 aa24.87■■□□□ 1.57
RPL23A-209ENST00000582736 CDK13Q14004 1512 aaKnown RBP24.86■■□□□ 1.57
RPL23A-209ENST00000582736 RANGAP1P46060 587 aaPredicted RBP24.84■■□□□ 1.57
RPL23A-209ENST00000582736 CSRNP3Q8WYN3 585 aa24.83■■□□□ 1.57
RPL23A-209ENST00000582736 IQSEC2Q5JU85 1478 aa24.82■■□□□ 1.56
RPL23A-209ENST00000582736 SETD1BQ9UPS6 1966 aaKnown RBP24.82■■□□□ 1.56
RPL23A-209ENST00000582736 KDM5CP41229 1560 aa24.79■■□□□ 1.56
RPL23A-209ENST00000582736 C3P01024 1663 aa24.78■■□□□ 1.56
RPL23A-209ENST00000582736 MYO5CQ9NQX4 1742 aa24.78■■□□□ 1.56
RPL23A-209ENST00000582736 ZNF518AQ6AHZ1 1483 aa24.77■■□□□ 1.56
RPL23A-209ENST00000582736 DIP2CQ9Y2E4 1556 aa24.77■■□□□ 1.56
RPL23A-209ENST00000582736 REREQ9P2R6 1566 aa24.76■■□□□ 1.55
RPL23A-209ENST00000582736 EFCAB2Q5VUJ9 269 aa24.74■■□□□ 1.55
RPL23A-209ENST00000582736 NCOA1Q15788 1441 aa24.72■■□□□ 1.55
RPL23A-209ENST00000582736 AFAP1Q8N556 730 aa24.7■■□□□ 1.54
RPL23A-209ENST00000582736 ABCA6Q8N139 1617 aa24.7■■□□□ 1.54
RPL23A-209ENST00000582736 KIF14Q15058 1648 aa24.69■■□□□ 1.54
RPL23A-209ENST00000582736 TRAPPC8Q9Y2L5 1435 aa24.69■■□□□ 1.54
RPL23A-209ENST00000582736 AGLP35573 1532 aa24.66■■□□□ 1.54
RPL23A-209ENST00000582736 ARHGAP5Q13017 1502 aa24.65■■□□□ 1.54
RPL23A-209ENST00000582736 MLH3Q9UHC1 1453 aa24.64■■□□□ 1.53
RPL23A-209ENST00000582736 CAMSAP1Q5T5Y3 1602 aa24.61■■□□□ 1.53
RPL23A-209ENST00000582736 EEA1Q15075 1411 aa24.61■■□□□ 1.53
RPL23A-209ENST00000582736 MYT1LQ9UL68 1186 aa24.59■■□□□ 1.53
RPL23A-209ENST00000582736 TROQ12816 1431 aaPredicted RBP24.57■■□□□ 1.52
RPL23A-209ENST00000582736 CNTLNQ9NXG0 1405 aa24.57■■□□□ 1.52
RPL23A-209ENST00000582736 ZNF335Q9H4Z2 1342 aaPredicted RBP24.57■■□□□ 1.52
RPL23A-209ENST00000582736 ESF1Q9H501 851 aaKnown RBP24.56■■□□□ 1.52
RPL23A-209ENST00000582736 UBAP1LF5GYI3 381 aa24.55■■□□□ 1.52
RPL23A-209ENST00000582736 CDC42BPBQ9Y5S2 1711 aa24.55■■□□□ 1.52
RPL23A-209ENST00000582736 NPATQ14207 1427 aa24.54■■□□□ 1.52
RPL23A-209ENST00000582736 ABCC1P33527 1531 aa24.54■■□□□ 1.52
RPL23A-209ENST00000582736 FMN1Q68DA7 1419 aa24.53■■□□□ 1.52
RPL23A-209ENST00000582736 CDK11AQ9UQ88 783 aaPredicted RBP24.53■■□□□ 1.52
RPL23A-209ENST00000582736 MROH2AA6NES4 1674 aa24.53■■□□□ 1.52
RPL23A-209ENST00000582736 EHMT2Q96KQ7 1210 aa24.52■■□□□ 1.52
RPL23A-209ENST00000582736 ATP1B4Q9UN42 357 aaPredicted RBP24.52■■□□□ 1.52
RPL23A-209ENST00000582736 KIDINS220Q9ULH0 1771 aa24.52■■□□□ 1.52
RPL23A-209ENST00000582736 ITSN2Q9NZM3 1697 aa24.51■■□□□ 1.51
RPL23A-209ENST00000582736 NCKAP5LQ9HCH0 1330 aa24.51■■□□□ 1.51
RPL23A-209ENST00000582736 CLIP1P30622 1438 aa24.5■■□□□ 1.51
RPL23A-209ENST00000582736 PREX2Q70Z35 1606 aa24.5■■□□□ 1.51
RPL23A-209ENST00000582736 LRRIQ1Q96JM4 1722 aa24.47■■□□□ 1.51
RPL23A-209ENST00000582736 ZNF142P52746 1687 aaPredicted RBP24.47■■□□□ 1.51
RPL23A-209ENST00000582736 MED1Q15648 1581 aaPredicted RBP24.47■■□□□ 1.51
RPL23A-209ENST00000582736 PLA2R1Q13018 1463 aa24.46■■□□□ 1.51
RPL23A-209ENST00000582736 TCOF1Q13428 1488 aaKnown RBP24.45■■□□□ 1.51
RPL23A-209ENST00000582736 ARHGAP35Q9NRY4 1499 aa24.45■■□□□ 1.51
RPL23A-209ENST00000582736 MYO3AQ8NEV4 1616 aa24.45■■□□□ 1.5
RPL23A-209ENST00000582736 ZMYM3Q14202 1370 aa24.43■■□□□ 1.5
RPL23A-209ENST00000582736 CEP170BQ9Y4F5 1589 aaPredicted RBP24.42■■□□□ 1.5
RPL23A-209ENST00000582736 PKD2Q13563 968 aa24.4■■□□□ 1.5
RPL23A-209ENST00000582736 SAMD9LQ8IVG5 1584 aa24.39■■□□□ 1.5
RPL23A-209ENST00000582736 CLTCQ00610 1675 aaKnown RBP24.37■■□□□ 1.49
RPL23A-209ENST00000582736 HSPA1LP34931 641 aa24.37■■□□□ 1.49
RPL23A-209ENST00000582736 SUPT6HQ7KZ85 1726 aaKnown RBP24.37■■□□□ 1.49
RPL23A-209ENST00000582736 PTPRKQ15262 1439 aa24.35■■□□□ 1.49
RPL23A-209ENST00000582736 CDC42BPAQ5VT25 1732 aa24.35■■□□□ 1.49
RPL23A-209ENST00000582736 PPP6R1Q9UPN7 881 aa24.33■■□□□ 1.49
RPL23A-209ENST00000582736 PLXNC1O60486 1568 aa24.33■■□□□ 1.48
RPL23A-209ENST00000582736 SYCP2Q9BX26 1530 aa24.3■■□□□ 1.48
RPL23A-209ENST00000582736 SCAF1Q9H7N4 1312 aaKnown RBP24.29■■□□□ 1.48
RPL23A-209ENST00000582736 PIP4K2BP78356 416 aa24.28■■□□□ 1.48
RPL23A-209ENST00000582736 ATP7AQ04656 1500 aa24.27■■□□□ 1.48
RPL23A-209ENST00000582736 CPS1P31327 1500 aa24.26■■□□□ 1.47
RPL23A-209ENST00000582736 INO80Q9ULG1 1556 aaPredicted RBP24.26■■□□□ 1.47
RPL23A-209ENST00000582736 UBTFP17480 764 aaKnown RBP24.26■■□□□ 1.47
RPL23A-209ENST00000582736 SPAG9O60271 1321 aaKnown RBP24.26■■□□□ 1.47
RPL23A-209ENST00000582736 A2ML1A8K2U0 1454 aa24.26■■□□□ 1.47
RPL23A-209ENST00000582736 CCDC18Q5T9S5 1454 aa24.26■■□□□ 1.47
RPL23A-209ENST00000582736 DNMT1P26358 1616 aaKnown RBP24.25■■□□□ 1.47
RPL23A-209ENST00000582736 A2MP01023 1474 aa24.25■■□□□ 1.47
RPL23A-209ENST00000582736 NEURL4Q96JN8 1562 aa24.25■■□□□ 1.47
RPL23A-209ENST00000582736 TOM1O60784 492 aa24.23■■□□□ 1.47
RPL23A-209ENST00000582736 POLR1AO95602 1720 aaPredicted RBP24.22■■□□□ 1.47
RPL23A-209ENST00000582736 ALKQ9UM73 1620 aa24.21■■□□□ 1.47
RPL23A-209ENST00000582736 SHANK2Q9UPX8 1470 aa24.21■■□□□ 1.47
RPL23A-209ENST00000582736 CASKIN1Q8WXD9 1431 aa24.21■■□□□ 1.47
RPL23A-209ENST00000582736 ZNF777Q9ULD5 760 aaPredicted RBP24.21■■□□□ 1.47
RPL23A-209ENST00000582736 HNRNPMP52272 730 aaKnown RBP eCLIP24.19■■□□□ 1.463e-6■□□□□ 9.2
RPL23A-209ENST00000582736 GPATCH8Q9UKJ3 1502 aaKnown RBP24.19■■□□□ 1.46
RPL23A-209ENST00000582736 GGT6Q6P531 493 aa24.18■■□□□ 1.46
RPL23A-209ENST00000582736 PHF23Q9BUL5 403 aaPredicted RBP24.18■■□□□ 1.46
RPL23A-209ENST00000582736 KIAA1107Q9UPP5 1409 aa24.16■■□□□ 1.46
RPL23A-209ENST00000582736 VWDEQ8N2E2 1590 aa24.16■■□□□ 1.46
RPL23A-209ENST00000582736 ADGBQ8N7X0 1667 aa24.12■■□□□ 1.45
RPL23A-209ENST00000582736 PLEKHH2Q8IVE3 1493 aa24.12■■□□□ 1.45
RPL23A-209ENST00000582736 CHIC1Q5VXU3 224 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms