RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 PIAS4Q8N2W9 510 aaPredicted RBP16.65■□□□□ 0.26
SKA2-206ENST00000581068 ITGAEP38570 1179 aa16.63■□□□□ 0.25
SKA2-206ENST00000581068 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.63■□□□□ 0.25
SKA2-206ENST00000581068 ADRA2BP18089 450 aa16.61■□□□□ 0.25
SKA2-206ENST00000581068 CDC42BPAQ5VT25 1732 aa16.61■□□□□ 0.25
SKA2-206ENST00000581068 TTC37Q6PGP7 1564 aa16.6■□□□□ 0.25
SKA2-206ENST00000581068 ZNF777Q9ULD5 760 aaPredicted RBP16.59■□□□□ 0.25
SKA2-206ENST00000581068 ZNF644Q9H582 1327 aaPredicted RBP16.58■□□□□ 0.24
SKA2-206ENST00000581068 PREX2Q70Z35 1606 aa16.57■□□□□ 0.24
SKA2-206ENST00000581068 MAPKBP1O60336 1514 aa16.57■□□□□ 0.24
SKA2-206ENST00000581068 PLCH2O75038 1416 aa16.57■□□□□ 0.24
SKA2-206ENST00000581068 CAMSAP2Q08AD1 1489 aa16.56■□□□□ 0.24
SKA2-206ENST00000581068 MYO5CQ9NQX4 1742 aa16.56■□□□□ 0.24
SKA2-206ENST00000581068 ABCA9Q8IUA7 1624 aa16.55■□□□□ 0.24
SKA2-206ENST00000581068 ARHGAP5Q13017 1502 aa16.55■□□□□ 0.24
SKA2-206ENST00000581068 CDC42BPBQ9Y5S2 1711 aa16.54■□□□□ 0.24
SKA2-206ENST00000581068 EFCAB2Q5VUJ9 269 aa16.54■□□□□ 0.24
SKA2-206ENST00000581068 ARAP3Q8WWN8 1544 aa16.52■□□□□ 0.24
SKA2-206ENST00000581068 PTPRKQ15262 1439 aa16.52■□□□□ 0.23
SKA2-206ENST00000581068 DNMT1P26358 1616 aaKnown RBP16.51■□□□□ 0.23
SKA2-206ENST00000581068 ABCC5O15440 1437 aa16.51■□□□□ 0.23
SKA2-206ENST00000581068 DAPK1P53355 1430 aa16.51■□□□□ 0.23
SKA2-206ENST00000581068 PLEKHH2Q8IVE3 1493 aa16.5■□□□□ 0.23
SKA2-206ENST00000581068 RSPH4AQ5TD94 716 aa16.5■□□□□ 0.23
SKA2-206ENST00000581068 SAMD9LQ8IVG5 1584 aa16.49■□□□□ 0.23
SKA2-206ENST00000581068 SETD5Q9C0A6 1442 aa16.49■□□□□ 0.23
SKA2-206ENST00000581068 HNRNPMP52272 730 aaKnown RBP eCLIP16.48■□□□□ 0.23
SKA2-206ENST00000581068 CD109Q6YHK3 1445 aa16.47■□□□□ 0.23
SKA2-206ENST00000581068 KIAA1107Q9UPP5 1409 aa16.47■□□□□ 0.23
SKA2-206ENST00000581068 CHIC2Q9UKJ5 165 aa16.47■□□□□ 0.23
SKA2-206ENST00000581068 ARHGEF5Q12774 1597 aa16.47■□□□□ 0.23
SKA2-206ENST00000581068 GLI2P10070 1586 aa16.46■□□□□ 0.23
SKA2-206ENST00000581068 TSPY4P0CV99 314 aa16.45■□□□□ 0.22
SKA2-206ENST00000581068 TSPY10P0CW01 314 aa16.45■□□□□ 0.22
SKA2-206ENST00000581068 HRCP23327 699 aa16.45■□□□□ 0.22
SKA2-206ENST00000581068 ROCK1Q13464 1354 aa16.45■□□□□ 0.22
SKA2-206ENST00000581068 MBD5Q9P267 1494 aa16.45■□□□□ 0.22
SKA2-206ENST00000581068 AKNAQ7Z591 1439 aa16.45■□□□□ 0.22
SKA2-206ENST00000581068 FANCAO15360 1455 aa16.44■□□□□ 0.22
SKA2-206ENST00000581068 HFM1A2PYH4 1435 aa16.44■□□□□ 0.22
SKA2-206ENST00000581068 RAB3GAP2Q9H2M9 1393 aa16.43■□□□□ 0.22
SKA2-206ENST00000581068 CCDC141Q6ZP82 1450 aa16.42■□□□□ 0.22
SKA2-206ENST00000581068 SHANK2Q9UPX8 1470 aa16.42■□□□□ 0.22
SKA2-206ENST00000581068 SYCP2Q9BX26 1530 aa16.42■□□□□ 0.22
SKA2-206ENST00000581068 FAM69CQ0P6D2 419 aa16.42■□□□□ 0.22
SKA2-206ENST00000581068 RRP7BPQ9NSQ0 103 aa16.42■□□□□ 0.22
SKA2-206ENST00000581068 CROCC2H7BZ55 1655 aa16.41■□□□□ 0.22
SKA2-206ENST00000581068 CCER1Q8TC90 406 aaPredicted RBP16.41■□□□□ 0.22
SKA2-206ENST00000581068 NAIPQ13075 1403 aa16.41■□□□□ 0.22
SKA2-206ENST00000581068 ABCC1P33527 1531 aa16.4■□□□□ 0.22
SKA2-206ENST00000581068 DIP2BQ9P265 1576 aa16.4■□□□□ 0.22
SKA2-206ENST00000581068 ADGRL2O95490 1459 aa16.4■□□□□ 0.22
SKA2-206ENST00000581068 ARHGEF12Q9NZN5 1544 aa16.4■□□□□ 0.22
SKA2-206ENST00000581068 ANKRD30AQ9BXX3 1397 aa16.39■□□□□ 0.21
SKA2-206ENST00000581068 CFAP74Q9C0B2 1584 aa16.39■□□□□ 0.21
SKA2-206ENST00000581068 C9orf84Q5VXU9 1444 aa16.39■□□□□ 0.21
SKA2-206ENST00000581068 MAP3K4Q9Y6R4 1608 aa16.39■□□□□ 0.21
SKA2-206ENST00000581068 ADGBQ8N7X0 1667 aa16.38■□□□□ 0.21
SKA2-206ENST00000581068 NCOA1Q15788 1441 aa16.37■□□□□ 0.21
SKA2-206ENST00000581068 ADGRL1O94910 1474 aa16.37■□□□□ 0.21
SKA2-206ENST00000581068 ACIN1Q9UKV3 1341 aaKnown RBP16.37■□□□□ 0.21
SKA2-206ENST00000581068 GCC2Q8IWJ2 1684 aa16.37■□□□□ 0.21
SKA2-206ENST00000581068 SCAPERQ9BY12 1400 aa16.36■□□□□ 0.21
SKA2-206ENST00000581068 NEO1Q92859 1461 aa16.36■□□□□ 0.21
SKA2-206ENST00000581068 MAST1Q9Y2H9 1570 aa16.36■□□□□ 0.21
SKA2-206ENST00000581068 TRAPPC8Q9Y2L5 1435 aa16.36■□□□□ 0.21
SKA2-206ENST00000581068 SPAG9O60271 1321 aaKnown RBP16.32■□□□□ 0.2
SKA2-206ENST00000581068 ZEB1P37275 1124 aaPredicted RBP16.32■□□□□ 0.2
SKA2-206ENST00000581068 AFAP1Q8N556 730 aa16.32■□□□□ 0.2
SKA2-206ENST00000581068 RTEL1-TNFRSF6BF6WH68 1400 aa16.31■□□□□ 0.2
SKA2-206ENST00000581068 DHX57Q6P158 1386 aaKnown RBP16.31■□□□□ 0.2
SKA2-206ENST00000581068 TEX14Q8IWB6 1497 aa16.29■□□□□ 0.2
SKA2-206ENST00000581068 KIF15Q9NS87 1388 aa16.29■□□□□ 0.2
SKA2-206ENST00000581068 KIF13AQ9H1H9 1805 aa16.29■□□□□ 0.2
SKA2-206ENST00000581068 DENND4BO75064 1496 aaPredicted RBP16.28■□□□□ 0.2
SKA2-206ENST00000581068 ZNF518AQ6AHZ1 1483 aa16.28■□□□□ 0.2
SKA2-206ENST00000581068 ANKRD50Q9ULJ7 1429 aa16.28■□□□□ 0.2
SKA2-206ENST00000581068 KDM6BO15054 1643 aa16.27■□□□□ 0.2
SKA2-206ENST00000581068 PLXNC1O60486 1568 aa16.27■□□□□ 0.2
SKA2-206ENST00000581068 TRIM52Q96A61 297 aa16.27■□□□□ 0.2
SKA2-206ENST00000581068 POGZQ7Z3K3 1410 aa16.27■□□□□ 0.19
SKA2-206ENST00000581068 CLSPNQ9HAW4 1339 aa16.26■□□□□ 0.19
SKA2-206ENST00000581068 MYT1LQ9UL68 1186 aa16.26■□□□□ 0.19
SKA2-206ENST00000581068 TSPOAP1O95153 1857 aa16.25■□□□□ 0.19
SKA2-206ENST00000581068 PPRC1Q5VV67 1664 aaKnown RBP16.24■□□□□ 0.19
SKA2-206ENST00000581068 ATP7AQ04656 1500 aa16.24■□□□□ 0.19
SKA2-206ENST00000581068 DUOX2Q9NRD8 1548 aa16.24■□□□□ 0.19
SKA2-206ENST00000581068 INO80Q9ULG1 1556 aaPredicted RBP16.23■□□□□ 0.19
SKA2-206ENST00000581068 ZFYVE16Q7Z3T8 1539 aa16.23■□□□□ 0.19
SKA2-206ENST00000581068 KDM5CP41229 1560 aa16.22■□□□□ 0.19
SKA2-206ENST00000581068 MLH3Q9UHC1 1453 aa16.22■□□□□ 0.19
SKA2-206ENST00000581068 RAPGEF3O95398 923 aa16.2■□□□□ 0.18
SKA2-206ENST00000581068 ERBINQ96RT1 1412 aa16.19■□□□□ 0.18
SKA2-206ENST00000581068 TRHP20396 242 aaPredicted RBP16.19■□□□□ 0.18
SKA2-206ENST00000581068 MPHOSPH9Q99550 1183 aa16.18■□□□□ 0.18
SKA2-206ENST00000581068 KIDINS220Q9ULH0 1771 aa16.18■□□□□ 0.18
SKA2-206ENST00000581068 HECW2Q9P2P5 1572 aa16.17■□□□□ 0.18
SKA2-206ENST00000581068 RICTORQ6R327 1708 aa16.17■□□□□ 0.18
SKA2-206ENST00000581068 DHX29Q7Z478 1369 aaKnown RBP16.17■□□□□ 0.18
SKA2-206ENST00000581068 NUP155O75694 1391 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms