RNA–Protein interactions for RNA: ENST00000580947.1

SUPT4H1-204, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SUPT4H1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-204ENST00000580947 ADAMTSL3P82987 1691 aa17.25■□□□□ 0.35
SUPT4H1-204ENST00000580947 CDK11AQ9UQ88 783 aaPredicted RBP17.24■□□□□ 0.35
SUPT4H1-204ENST00000580947 BCORL1Q5H9F3 1711 aa17.23■□□□□ 0.35
SUPT4H1-204ENST00000580947 POGZQ7Z3K3 1410 aa17.21■□□□□ 0.35
SUPT4H1-204ENST00000580947 CEP162Q5TB80 1403 aa17.21■□□□□ 0.34
SUPT4H1-204ENST00000580947 ARHGAP5Q13017 1502 aa17.19■□□□□ 0.34
SUPT4H1-204ENST00000580947 SCAPERQ9BY12 1400 aa17.19■□□□□ 0.34
SUPT4H1-204ENST00000580947 ZFYVE16Q7Z3T8 1539 aa17.18■□□□□ 0.34
SUPT4H1-204ENST00000580947 KDM5CP41229 1560 aa17.18■□□□□ 0.34
SUPT4H1-204ENST00000580947 MAGI2Q86UL8 1455 aa17.18■□□□□ 0.34
SUPT4H1-204ENST00000580947 ITSN2Q9NZM3 1697 aa17.17■□□□□ 0.34
SUPT4H1-204ENST00000580947 YEATS2Q9ULM3 1422 aa17.17■□□□□ 0.34
SUPT4H1-204ENST00000580947 ABCC1P33527 1531 aa17.16■□□□□ 0.34
SUPT4H1-204ENST00000580947 MADDQ8WXG6 1647 aa17.15■□□□□ 0.34
SUPT4H1-204ENST00000580947 EFCAB2Q5VUJ9 269 aa17.15■□□□□ 0.34
SUPT4H1-204ENST00000580947 ARHGEF12Q9NZN5 1544 aa17.13■□□□□ 0.33
SUPT4H1-204ENST00000580947 ZNF518AQ6AHZ1 1483 aa17.12■□□□□ 0.33
SUPT4H1-204ENST00000580947 SAMD9LQ8IVG5 1584 aa17.11■□□□□ 0.33
SUPT4H1-204ENST00000580947 HECW2Q9P2P5 1572 aa17.11■□□□□ 0.33
SUPT4H1-204ENST00000580947 GPATCH8Q9UKJ3 1502 aaKnown RBP17.11■□□□□ 0.33
SUPT4H1-204ENST00000580947 RIMS1Q86UR5 1692 aaKnown RBP17.1■□□□□ 0.33
SUPT4H1-204ENST00000580947 PTPRMP28827 1452 aa17.09■□□□□ 0.33
SUPT4H1-204ENST00000580947 DIP2CQ9Y2E4 1556 aa17.09■□□□□ 0.33
SUPT4H1-204ENST00000580947 ABCA6Q8N139 1617 aa17.09■□□□□ 0.33
SUPT4H1-204ENST00000580947 KIDINS220Q9ULH0 1771 aa17.08■□□□□ 0.33
SUPT4H1-204ENST00000580947 EHBP1L1Q8N3D4 1523 aa17.08■□□□□ 0.32
SUPT4H1-204ENST00000580947 LOC105371045A0A1W2PR82 267 aa17.08■□□□□ 0.32
SUPT4H1-204ENST00000580947 FER1L4A9Z1Z3 1794 aa17.07■□□□□ 0.32
SUPT4H1-204ENST00000580947 TIAM1Q13009 1591 aa17.07■□□□□ 0.32
SUPT4H1-204ENST00000580947 REREQ9P2R6 1566 aa17.07■□□□□ 0.32
SUPT4H1-204ENST00000580947 ATP10AO60312 1499 aa17.06■□□□□ 0.32
SUPT4H1-204ENST00000580947 MLH3Q9UHC1 1453 aa17.06■□□□□ 0.32
SUPT4H1-204ENST00000580947 TRAPPC8Q9Y2L5 1435 aa17.06■□□□□ 0.32
SUPT4H1-204ENST00000580947 AFAP1Q8N556 730 aa17.05■□□□□ 0.32
SUPT4H1-204ENST00000580947 C9orf84Q5VXU9 1444 aa17.04■□□□□ 0.32
SUPT4H1-204ENST00000580947 SYCP2Q9BX26 1530 aa17.04■□□□□ 0.32
SUPT4H1-204ENST00000580947 VPS8Q8N3P4 1428 aa17.03■□□□□ 0.32
SUPT4H1-204ENST00000580947 MTUS2Q5JR59 1369 aa17.02■□□□□ 0.32
SUPT4H1-204ENST00000580947 SUPT6HQ7KZ85 1726 aaKnown RBP17.01■□□□□ 0.31
SUPT4H1-204ENST00000580947 ARID4BQ4LE39 1312 aaPredicted RBP17.01■□□□□ 0.31
SUPT4H1-204ENST00000580947 INO80Q9ULG1 1556 aaPredicted RBP17■□□□□ 0.31
SUPT4H1-204ENST00000580947 KIAA1107Q9UPP5 1409 aa16.99■□□□□ 0.31
SUPT4H1-204ENST00000580947 CCNB3Q8WWL7 1395 aa16.99■□□□□ 0.31
SUPT4H1-204ENST00000580947 AGLP35573 1532 aa16.97■□□□□ 0.31
SUPT4H1-204ENST00000580947 PLEKHH2Q8IVE3 1493 aa16.97■□□□□ 0.31
SUPT4H1-204ENST00000580947 MAP3K1Q13233 1512 aa16.96■□□□□ 0.31
SUPT4H1-204ENST00000580947 NCOA2Q15596 1464 aa16.96■□□□□ 0.31
SUPT4H1-204ENST00000580947 ATP7AQ04656 1500 aa16.95■□□□□ 0.3
SUPT4H1-204ENST00000580947 MBD5Q9P267 1494 aa16.94■□□□□ 0.3
SUPT4H1-204ENST00000580947 CFDP1Q9UEE9 299 aaPredicted RBP16.94■□□□□ 0.3
SUPT4H1-204ENST00000580947 PLXNC1O60486 1568 aa16.94■□□□□ 0.3
SUPT4H1-204ENST00000580947 LRRC9Q6ZRR7 1453 aa16.93■□□□□ 0.3
SUPT4H1-204ENST00000580947 LMTK3Q96Q04 1460 aa16.93■□□□□ 0.3
SUPT4H1-204ENST00000580947 ZNF777Q9ULD5 760 aaPredicted RBP16.93■□□□□ 0.3
SUPT4H1-204ENST00000580947 HNRNPMP52272 730 aaKnown RBP eCLIP16.91■□□□□ 0.3
SUPT4H1-204ENST00000580947 ZNF644Q9H582 1327 aaPredicted RBP16.91■□□□□ 0.3
SUPT4H1-204ENST00000580947 C3P01024 1663 aa16.91■□□□□ 0.3
SUPT4H1-204ENST00000580947 ADGBQ8N7X0 1667 aa16.91■□□□□ 0.3
SUPT4H1-204ENST00000580947 MLECQ14165 292 aa16.9■□□□□ 0.3
SUPT4H1-204ENST00000580947 SETD1BQ9UPS6 1966 aaKnown RBP16.89■□□□□ 0.3
SUPT4H1-204ENST00000580947 CAMSAP2Q08AD1 1489 aa16.88■□□□□ 0.29
SUPT4H1-204ENST00000580947 PREX1Q8TCU6 1659 aa16.88■□□□□ 0.29
SUPT4H1-204ENST00000580947 SPAG9O60271 1321 aaKnown RBP16.87■□□□□ 0.29
SUPT4H1-204ENST00000580947 ARHGEF5Q12774 1597 aa16.86■□□□□ 0.29
SUPT4H1-204ENST00000580947 MROH2AA6NES4 1674 aa16.86■□□□□ 0.29
SUPT4H1-204ENST00000580947 KANK4Q5T7N3 995 aaPredicted RBP16.85■□□□□ 0.29
SUPT4H1-204ENST00000580947 MYT1LQ9UL68 1186 aa16.84■□□□□ 0.29
SUPT4H1-204ENST00000580947 RTEL1-TNFRSF6BF6WH68 1400 aa16.83■□□□□ 0.28
SUPT4H1-204ENST00000580947 A2MP01023 1474 aa16.83■□□□□ 0.28
SUPT4H1-204ENST00000580947 CCDC141Q6ZP82 1450 aa16.83■□□□□ 0.28
SUPT4H1-204ENST00000580947 CLTCQ00610 1675 aaKnown RBP16.81■□□□□ 0.28
SUPT4H1-204ENST00000580947 CEBPAP49715 358 aaPredicted RBP16.79■□□□□ 0.28
SUPT4H1-204ENST00000580947 MAST1Q9Y2H9 1570 aa16.79■□□□□ 0.28
SUPT4H1-204ENST00000580947 MYOM3Q5VTT5 1437 aa16.79■□□□□ 0.28
SUPT4H1-204ENST00000580947 CNTLNQ9NXG0 1405 aa16.78■□□□□ 0.28
SUPT4H1-204ENST00000580947 PLPPR3Q6T4P5 718 aa16.77■□□□□ 0.28
SUPT4H1-204ENST00000580947 CROCC2H7BZ55 1655 aa16.77■□□□□ 0.28
SUPT4H1-204ENST00000580947 MIA2Q96PC5 1412 aa16.77■□□□□ 0.27
SUPT4H1-204ENST00000580947 STRCQ7RTU9 1775 aa16.77■□□□□ 0.27
SUPT4H1-204ENST00000580947 HSPA2P54652 639 aa16.74■□□□□ 0.27
SUPT4H1-204ENST00000580947 DHX29Q7Z478 1369 aaKnown RBP16.74■□□□□ 0.27
SUPT4H1-204ENST00000580947 RSPH4AQ5TD94 716 aa16.73■□□□□ 0.27
SUPT4H1-204ENST00000580947 PTPN23Q9H3S7 1636 aa16.73■□□□□ 0.27
SUPT4H1-204ENST00000580947 NPATQ14207 1427 aa16.7■□□□□ 0.26
SUPT4H1-204ENST00000580947 RNF17Q9BXT8 1623 aaKnown RBP16.7■□□□□ 0.26
SUPT4H1-204ENST00000580947 ZNF142P52746 1687 aaPredicted RBP16.7■□□□□ 0.26
SUPT4H1-204ENST00000580947 UHRF1BP1Q6BDS2 1440 aa16.7■□□□□ 0.26
SUPT4H1-204ENST00000580947 ZMYM3Q14202 1370 aa16.69■□□□□ 0.26
SUPT4H1-204ENST00000580947 DNMT1P26358 1616 aaKnown RBP16.69■□□□□ 0.26
SUPT4H1-204ENST00000580947 MYO3AQ8NEV4 1616 aa16.69■□□□□ 0.26
SUPT4H1-204ENST00000580947 EIF2AK4Q9P2K8 1649 aaKnown RBP16.69■□□□□ 0.26
SUPT4H1-204ENST00000580947 FAM135AQ9P2D6 1515 aa16.69■□□□□ 0.26
SUPT4H1-204ENST00000580947 TCOF1Q13428 1488 aaKnown RBP16.68■□□□□ 0.26
SUPT4H1-204ENST00000580947 PTPRKQ15262 1439 aa16.67■□□□□ 0.26
SUPT4H1-204ENST00000580947 SHANK2Q9UPX8 1470 aa16.67■□□□□ 0.26
SUPT4H1-204ENST00000580947 MROH1Q8NDA8 1641 aa16.67■□□□□ 0.26
SUPT4H1-204ENST00000580947 FGD6Q6ZV73 1430 aa16.66■□□□□ 0.26
SUPT4H1-204ENST00000580947 ILDR1Q86SU0 546 aaPredicted RBP16.66■□□□□ 0.26
SUPT4H1-204ENST00000580947 PPP6R1Q9UPN7 881 aa16.66■□□□□ 0.26
SUPT4H1-204ENST00000580947 KDM5DQ9BY66 1539 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms